RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 UPF1Q92900 1129 aaKnown RBP eCLIP28.57■■■□□ 2.16
TRAPPC6A-203ENST00000587818 GJD4Q96KN9 370 aaPredicted RBP28.57■■■□□ 2.16
TRAPPC6A-203ENST00000587818 CARD11Q9BXL7 1154 aa28.57■■■□□ 2.16
TRAPPC6A-203ENST00000587818 CABP1Q9NZU7 370 aa28.57■■■□□ 2.16
TRAPPC6A-203ENST00000587818 SLIT2O94813 1529 aa28.56■■■□□ 2.16
TRAPPC6A-203ENST00000587818 TOPAZ1Q8N9V7 1692 aa28.55■■■□□ 2.16
TRAPPC6A-203ENST00000587818 PPIP5K1Q6PFW1 1433 aa28.55■■■□□ 2.16
TRAPPC6A-203ENST00000587818 POLR3AO14802 1390 aaPredicted RBP28.55■■■□□ 2.16
TRAPPC6A-203ENST00000587818 PCGF6Q9BYE7 350 aa28.55■■■□□ 2.16
TRAPPC6A-203ENST00000587818 ABCA3Q99758 1704 aa28.55■■■□□ 2.16
TRAPPC6A-203ENST00000587818 EVC2Q86UK5 1308 aa28.54■■■□□ 2.16
TRAPPC6A-203ENST00000587818 ABTB2Q8N961 1025 aa28.5■■■□□ 2.15
TRAPPC6A-203ENST00000587818 CCDC9Q9Y3X0 531 aaKnown RBP28.5■■■□□ 2.15
TRAPPC6A-203ENST00000587818 BTG4Q9NY30 223 aa28.48■■■□□ 2.15
TRAPPC6A-203ENST00000587818 ZC3H6P61129 1189 aaKnown RBP28.47■■■□□ 2.15
TRAPPC6A-203ENST00000587818 PLCH1Q4KWH8 1693 aa28.46■■■□□ 2.15
TRAPPC6A-203ENST00000587818 VPS72Q15906 364 aa28.46■■■□□ 2.15
TRAPPC6A-203ENST00000587818 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.46■■■□□ 2.15
TRAPPC6A-203ENST00000587818 RALGAPBQ86X10 1494 aa28.46■■■□□ 2.15
TRAPPC6A-203ENST00000587818 CHRNA2Q15822 529 aa28.45■■■□□ 2.14
TRAPPC6A-203ENST00000587818 PRDM11Q9NQV5 511 aa28.44■■■□□ 2.14
TRAPPC6A-203ENST00000587818 GLI3P10071 1580 aa28.43■■■□□ 2.14
TRAPPC6A-203ENST00000587818 CRYBG1Q9Y4K1 1723 aa28.43■■■□□ 2.14
TRAPPC6A-203ENST00000587818 KIAA0232Q92628 1395 aa28.41■■■□□ 2.14
TRAPPC6A-203ENST00000587818 NWD2Q9ULI1 1742 aa28.4■■■□□ 2.14
TRAPPC6A-203ENST00000587818 NLRP13Q86W25 1043 aa28.39■■■□□ 2.14
TRAPPC6A-203ENST00000587818 COL14A1Q05707 1796 aaKnown RBP28.38■■■□□ 2.13
TRAPPC6A-203ENST00000587818 SEPT12Q8IYM1 358 aa28.38■■■□□ 2.13
TRAPPC6A-203ENST00000587818 USP6P35125 1406 aa28.37■■■□□ 2.13
TRAPPC6A-203ENST00000587818 NLRP6P59044 892 aa28.36■■■□□ 2.13
TRAPPC6A-203ENST00000587818 PHRF1Q9P1Y6 1649 aaKnown RBP28.36■■■□□ 2.13
TRAPPC6A-203ENST00000587818 STRN4Q9NRL3 753 aa28.35■■■□□ 2.13
TRAPPC6A-203ENST00000587818 ATAD2Q6PL18 1390 aa28.35■■■□□ 2.13
TRAPPC6A-203ENST00000587818 ST20-MTHFSA0A0A6YYL1 179 aa28.34■■■□□ 2.13
TRAPPC6A-203ENST00000587818 GCP02774 474 aa28.34■■■□□ 2.13
TRAPPC6A-203ENST00000587818 TMC1Q8TDI8 760 aa28.34■■■□□ 2.13
TRAPPC6A-203ENST00000587818 ZNF692Q9BU19 519 aaPredicted RBP28.34■■■□□ 2.13
TRAPPC6A-203ENST00000587818 NRAPQ86VF7 1730 aa28.33■■■□□ 2.13
TRAPPC6A-203ENST00000587818 ZBTB7CA1YPR0 619 aa28.33■■■□□ 2.13
TRAPPC6A-203ENST00000587818 FAM98CQ17RN3 349 aaKnown RBP28.33■■■□□ 2.13
TRAPPC6A-203ENST00000587818 USP19O94966 1318 aa28.33■■■□□ 2.13
TRAPPC6A-203ENST00000587818 A0A0G2JS52 829 aa28.32■■■□□ 2.12
TRAPPC6A-203ENST00000587818 ONECUT3O60422 494 aaPredicted RBP28.32■■■□□ 2.12
TRAPPC6A-203ENST00000587818 MYT1Q01538 1121 aa28.32■■■□□ 2.12
TRAPPC6A-203ENST00000587818 SBNO2Q9Y2G9 1366 aa28.32■■■□□ 2.12
TRAPPC6A-203ENST00000587818 TTC21BQ7Z4L5 1316 aa28.31■■■□□ 2.12
TRAPPC6A-203ENST00000587818 BRD4O60885 1362 aaPredicted RBP28.31■■■□□ 2.12
TRAPPC6A-203ENST00000587818 SSH2Q76I76 1423 aa28.31■■■□□ 2.12
TRAPPC6A-203ENST00000587818 BRWD3Q6RI45 1802 aa28.3■■■□□ 2.12
TRAPPC6A-203ENST00000587818 SLC12A5Q9H2X9 1139 aa28.3■■■□□ 2.12
TRAPPC6A-203ENST00000587818 SPATA31A5Q5VU36 1347 aa28.29■■■□□ 2.12
TRAPPC6A-203ENST00000587818 SPATA31A7Q8IWB4 1347 aa28.29■■■□□ 2.12
TRAPPC6A-203ENST00000587818 EVA1CP58658 441 aa28.29■■■□□ 2.12
TRAPPC6A-203ENST00000587818 TESK2Q96S53 571 aa28.29■■■□□ 2.12
TRAPPC6A-203ENST00000587818 KTN1Q86UP2 1357 aaKnown RBP28.27■■■□□ 2.12
TRAPPC6A-203ENST00000587818 NRKQ7Z2Y5 1582 aa28.27■■■□□ 2.12
TRAPPC6A-203ENST00000587818 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.26■■■□□ 2.11
TRAPPC6A-203ENST00000587818 ZRANB1Q9UGI0 708 aa28.26■■■□□ 2.11
TRAPPC6A-203ENST00000587818 AKAP12Q02952 1782 aa28.26■■■□□ 2.11
TRAPPC6A-203ENST00000587818 CPSF1Q10570 1443 aaKnown RBP28.26■■■□□ 2.11
TRAPPC6A-203ENST00000587818 SOX12O15370 315 aa28.25■■■□□ 2.11
TRAPPC6A-203ENST00000587818 USP35Q9P2H5 1018 aa28.25■■■□□ 2.11
TRAPPC6A-203ENST00000587818 KRT27Q7Z3Y8 459 aa28.24■■■□□ 2.11
TRAPPC6A-203ENST00000587818 CAMTA1Q9Y6Y1 1673 aa28.23■■■□□ 2.11
TRAPPC6A-203ENST00000587818 CCER1Q8TC90 406 aaPredicted RBP28.23■■■□□ 2.11
TRAPPC6A-203ENST00000587818 CPDO75976 1380 aa28.23■■■□□ 2.11
TRAPPC6A-203ENST00000587818 PIK3C2AO00443 1686 aa28.23■■■□□ 2.11
TRAPPC6A-203ENST00000587818 SPATA31A1Q5TZJ5 1347 aa28.22■■■□□ 2.11
TRAPPC6A-203ENST00000587818 LARP1Q6PKG0 1096 aaKnown RBP28.22■■■□□ 2.11
TRAPPC6A-203ENST00000587818 TTC21AQ8NDW8 1320 aa28.2■■■□□ 2.11
TRAPPC6A-203ENST00000587818 CLSPNQ9HAW4 1339 aa28.2■■■□□ 2.11
TRAPPC6A-203ENST00000587818 FAM182BQ5T319 152 aa28.2■■■□□ 2.1
TRAPPC6A-203ENST00000587818 TIMELESSQ9UNS1 1208 aa28.2■■■□□ 2.1
TRAPPC6A-203ENST00000587818 HDGFL2Q7Z4V5 671 aaPredicted RBP28.19■■■□□ 2.1
TRAPPC6A-203ENST00000587818 CD163L1Q9NR16 1453 aa28.19■■■□□ 2.1
TRAPPC6A-203ENST00000587818 NME9Q86XW9 330 aa28.18■■■□□ 2.1
TRAPPC6A-203ENST00000587818 PUS7Q96PZ0 661 aaKnown RBP28.18■■■□□ 2.1
TRAPPC6A-203ENST00000587818 USP47Q96K76 1375 aa28.18■■■□□ 2.1
TRAPPC6A-203ENST00000587818 SLIT3O75094 1523 aa28.17■■■□□ 2.1
TRAPPC6A-203ENST00000587818 CCDC125Q86Z20 511 aa28.15■■■□□ 2.1
TRAPPC6A-203ENST00000587818 TERF2IPQ9NYB0 399 aa28.15■■■□□ 2.1
TRAPPC6A-203ENST00000587818 AXIN2Q9Y2T1 843 aa28.15■■■□□ 2.1
TRAPPC6A-203ENST00000587818 LMO7Q8WWI1 1683 aa28.14■■■□□ 2.1
TRAPPC6A-203ENST00000587818 KCNH5Q8NCM2 988 aa28.14■■■□□ 2.1
TRAPPC6A-203ENST00000587818 MON2Q7Z3U7 1717 aa28.14■■■□□ 2.1
TRAPPC6A-203ENST00000587818 ARHGEF25Q86VW2 580 aa28.13■■■□□ 2.09
TRAPPC6A-203ENST00000587818 A0A1W2PP64 1363 aa28.11■■■□□ 2.09
TRAPPC6A-203ENST00000587818 AATKQ6ZMQ8 1374 aa28.11■■■□□ 2.09
TRAPPC6A-203ENST00000587818 SLC24A1O60721 1099 aa28.11■■■□□ 2.09
TRAPPC6A-203ENST00000587818 TMF1P82094 1093 aa28.11■■■□□ 2.09
TRAPPC6A-203ENST00000587818 DEFB132Q7Z7B7 95 aa28.1■■■□□ 2.09
TRAPPC6A-203ENST00000587818 TCP11L2Q8N4U5 519 aa28.1■■■□□ 2.09
TRAPPC6A-203ENST00000587818 EP400Q96L91 3159 aa28.1■■■□□ 2.09
TRAPPC6A-203ENST00000587818 COL5A2P05997 1499 aaPredicted RBP28.08■■■□□ 2.09
TRAPPC6A-203ENST00000587818 BARGINQ6ZT62 677 aa28.08■■■□□ 2.09
TRAPPC6A-203ENST00000587818 COL18A1P39060 1754 aa28.08■■■□□ 2.09
TRAPPC6A-203ENST00000587818 BLMP54132 1417 aaPredicted RBP28.08■■■□□ 2.09
TRAPPC6A-203ENST00000587818 THSD7AQ9UPZ6 1657 aa28.07■■■□□ 2.08
TRAPPC6A-203ENST00000587818 USP31Q70CQ4 1352 aa28.07■■■□□ 2.08
TRAPPC6A-203ENST00000587818 SF3B2Q13435 895 aaKnown RBP28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms