RNA–Protein interactions for RNA: ENST00000587637.2

SF3A2-203, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-203ENST00000587637 BTG4Q9NY30 223 aa24.64■■□□□ 1.54
SF3A2-203ENST00000587637 THSD7AQ9UPZ6 1657 aa24.63■■□□□ 1.53
SF3A2-203ENST00000587637 A0A0G2JS52 829 aa24.63■■□□□ 1.53
SF3A2-203ENST00000587637 MYT1Q01538 1121 aa24.63■■□□□ 1.53
SF3A2-203ENST00000587637 NGDNQ8NEJ9 315 aaKnown RBP24.63■■□□□ 1.53
SF3A2-203ENST00000587637 PAK3O75914 559 aaPredicted RBP24.62■■□□□ 1.53
SF3A2-203ENST00000587637 FAM98CQ17RN3 349 aaKnown RBP24.62■■□□□ 1.53
SF3A2-203ENST00000587637 ZRANB1Q9UGI0 708 aa24.62■■□□□ 1.53
SF3A2-203ENST00000587637 NRKQ7Z2Y5 1582 aa24.6■■□□□ 1.53
SF3A2-203ENST00000587637 NUTM2GQ5VZR2 741 aa24.6■■□□□ 1.53
SF3A2-203ENST00000587637 NUDT16Q96DE0 195 aaKnown RBP24.6■■□□□ 1.53
SF3A2-203ENST00000587637 KRT27Q7Z3Y8 459 aa24.59■■□□□ 1.53
SF3A2-203ENST00000587637 CCDC125Q86Z20 511 aa24.59■■□□□ 1.53
SF3A2-203ENST00000587637 FAM182BQ5T319 152 aa24.58■■□□□ 1.53
SF3A2-203ENST00000587637 QRICH2Q9H0J4 1663 aa24.58■■□□□ 1.53
SF3A2-203ENST00000587637 TNS1Q9HBL0 1735 aaKnown RBP24.58■■□□□ 1.52
SF3A2-203ENST00000587637 KIAA0232Q92628 1395 aa24.57■■□□□ 1.52
SF3A2-203ENST00000587637 ONECUT3O60422 494 aaPredicted RBP24.57■■□□□ 1.52
SF3A2-203ENST00000587637 NBPF1Q3BBV0 1214 aa24.57■■□□□ 1.52
SF3A2-203ENST00000587637 CHRNA2Q15822 529 aa24.56■■□□□ 1.52
SF3A2-203ENST00000587637 CDK19Q9BWU1 502 aa24.56■■□□□ 1.52
SF3A2-203ENST00000587637 RGPD1P0DJD0 1748 aa24.55■■□□□ 1.52
SF3A2-203ENST00000587637 PRDM11Q9NQV5 511 aa24.55■■□□□ 1.52
SF3A2-203ENST00000587637 HRCP23327 699 aa24.54■■□□□ 1.52
SF3A2-203ENST00000587637 SPATA31A5Q5VU36 1347 aa24.54■■□□□ 1.52
SF3A2-203ENST00000587637 SPATA31A7Q8IWB4 1347 aa24.54■■□□□ 1.52
SF3A2-203ENST00000587637 POLR3AO14802 1390 aaPredicted RBP24.53■■□□□ 1.52
SF3A2-203ENST00000587637 ACEP12821 1306 aa24.52■■□□□ 1.52
SF3A2-203ENST00000587637 LMO7Q8WWI1 1683 aa24.5■■□□□ 1.51
SF3A2-203ENST00000587637 SF3B2Q13435 895 aaKnown RBP24.5■■□□□ 1.51
SF3A2-203ENST00000587637 STAC3Q96MF2 364 aa24.5■■□□□ 1.51
SF3A2-203ENST00000587637 ZC3H6P61129 1189 aaKnown RBP24.49■■□□□ 1.51
SF3A2-203ENST00000587637 STRN4Q9NRL3 753 aa24.48■■□□□ 1.51
SF3A2-203ENST00000587637 PSDA5PKW4 1024 aaPredicted RBP24.47■■□□□ 1.51
SF3A2-203ENST00000587637 LRP5O75197 1615 aa24.46■■□□□ 1.51
SF3A2-203ENST00000587637 PPIP5K1Q6PFW1 1433 aa24.46■■□□□ 1.51
SF3A2-203ENST00000587637 SPATA31A1Q5TZJ5 1347 aa24.46■■□□□ 1.51
SF3A2-203ENST00000587637 CAMTA1Q9Y6Y1 1673 aa24.46■■□□□ 1.51
SF3A2-203ENST00000587637 NBPF8Q3BBV2 869 aa24.45■■□□□ 1.5
SF3A2-203ENST00000587637 TRPM1Q7Z4N2 1603 aa24.45■■□□□ 1.5
SF3A2-203ENST00000587637 SSH2Q76I76 1423 aa24.44■■□□□ 1.5
SF3A2-203ENST00000587637 CABP2Q9NPB3 220 aa24.44■■□□□ 1.5
SF3A2-203ENST00000587637 CCDC61Q9Y6R9 512 aa24.43■■□□□ 1.5
SF3A2-203ENST00000587637 CENPJQ9HC77 1338 aaPredicted RBP24.42■■□□□ 1.5
SF3A2-203ENST00000587637 EN1Q05925 392 aaPredicted RBP24.42■■□□□ 1.5
SF3A2-203ENST00000587637 USP35Q9P2H5 1018 aa24.42■■□□□ 1.5
SF3A2-203ENST00000587637 USP19O94966 1318 aa24.41■■□□□ 1.5
SF3A2-203ENST00000587637 PIK3C2AO00443 1686 aa24.41■■□□□ 1.5
SF3A2-203ENST00000587637 PLEKHG3A1L390 1219 aa24.41■■□□□ 1.5
SF3A2-203ENST00000587637 BAG6P46379 1132 aa24.41■■□□□ 1.5
SF3A2-203ENST00000587637 SRPK2P78362 688 aaKnown RBP24.41■■□□□ 1.5
SF3A2-203ENST00000587637 ABTB2Q8N961 1025 aa24.39■■□□□ 1.49
SF3A2-203ENST00000587637 LARP1Q6PKG0 1096 aaKnown RBP24.38■■□□□ 1.49
SF3A2-203ENST00000587637 SIN3AQ96ST3 1273 aa24.37■■□□□ 1.49
SF3A2-203ENST00000587637 DISP2A7MBM2 1401 aa24.36■■□□□ 1.49
SF3A2-203ENST00000587637 L3MBTL2Q969R5 705 aa24.36■■□□□ 1.49
SF3A2-203ENST00000587637 RREB1Q92766 1687 aa24.36■■□□□ 1.49
SF3A2-203ENST00000587637 USP6P35125 1406 aa24.35■■□□□ 1.49
SF3A2-203ENST00000587637 SLIT3O75094 1523 aa24.35■■□□□ 1.49
SF3A2-203ENST00000587637 COL5A2P05997 1499 aaPredicted RBP24.35■■□□□ 1.49
SF3A2-203ENST00000587637 CPDO75976 1380 aa24.35■■□□□ 1.49
SF3A2-203ENST00000587637 WNK3Q9BYP7 1800 aa24.35■■□□□ 1.49
SF3A2-203ENST00000587637 NUP188Q5SRE5 1749 aa24.35■■□□□ 1.49
SF3A2-203ENST00000587637 AKAP12Q02952 1782 aa24.34■■□□□ 1.49
SF3A2-203ENST00000587637 ZBTB7CA1YPR0 619 aa24.34■■□□□ 1.49
SF3A2-203ENST00000587637 TRIM37O94972 964 aa24.34■■□□□ 1.49
SF3A2-203ENST00000587637 PARP4Q9UKK3 1724 aaKnown RBP24.34■■□□□ 1.49
SF3A2-203ENST00000587637 LRRC37A3O60309 1634 aa24.33■■□□□ 1.49
SF3A2-203ENST00000587637 EZH2Q15910 746 aaKnown RBP24.33■■□□□ 1.49
SF3A2-203ENST00000587637 COL18A1P39060 1754 aa24.32■■□□□ 1.48
SF3A2-203ENST00000587637 CABP1Q9NZU7 370 aa24.31■■□□□ 1.48
SF3A2-203ENST00000587637 RGPD5Q99666 1765 aa24.31■■□□□ 1.48
SF3A2-203ENST00000587637 EVA1CP58658 441 aa24.3■■□□□ 1.48
SF3A2-203ENST00000587637 R3HDM1Q15032 1099 aaKnown RBP24.3■■□□□ 1.48
SF3A2-203ENST00000587637 GCP02774 474 aa24.29■■□□□ 1.48
SF3A2-203ENST00000587637 PEAK1Q9H792 1746 aa24.28■■□□□ 1.48
SF3A2-203ENST00000587637 NEUROD1Q13562 356 aa24.27■■□□□ 1.48
SF3A2-203ENST00000587637 BARGINQ6ZT62 677 aa24.27■■□□□ 1.48
SF3A2-203ENST00000587637 NLRP13Q86W25 1043 aa24.26■■□□□ 1.47
SF3A2-203ENST00000587637 TCP11L2Q8N4U5 519 aa24.26■■□□□ 1.47
SF3A2-203ENST00000587637 ROCK2O75116 1388 aaKnown RBP24.26■■□□□ 1.47
SF3A2-203ENST00000587637 CAMKK2Q96RR4 588 aa24.25■■□□□ 1.47
SF3A2-203ENST00000587637 SBF2Q86WG5 1849 aa24.24■■□□□ 1.47
SF3A2-203ENST00000587637 FAM196AQ6ZSG2 479 aa24.24■■□□□ 1.47
SF3A2-203ENST00000587637 MON2Q7Z3U7 1717 aa24.24■■□□□ 1.47
SF3A2-203ENST00000587637 NLRP6P59044 892 aa24.23■■□□□ 1.47
SF3A2-203ENST00000587637 CRB1P82279 1406 aa24.23■■□□□ 1.47
SF3A2-203ENST00000587637 APBA3O96018 575 aa24.22■■□□□ 1.47
SF3A2-203ENST00000587637 CPSF1Q10570 1443 aaKnown RBP24.21■■□□□ 1.47
SF3A2-203ENST00000587637 EVC2Q86UK5 1308 aa24.21■■□□□ 1.47
SF3A2-203ENST00000587637 SOX12O15370 315 aa24.21■■□□□ 1.47
SF3A2-203ENST00000587637 PDE3BQ13370 1112 aa24.21■■□□□ 1.47
SF3A2-203ENST00000587637 NFAT5O94916 1531 aa24.2■■□□□ 1.47
SF3A2-203ENST00000587637 AATKQ6ZMQ8 1374 aa24.19■■□□□ 1.46
SF3A2-203ENST00000587637 BRD4O60885 1362 aaPredicted RBP24.18■■□□□ 1.46
SF3A2-203ENST00000587637 TTC21BQ7Z4L5 1316 aa24.17■■□□□ 1.46
SF3A2-203ENST00000587637 AXIN2Q9Y2T1 843 aa24.17■■□□□ 1.46
SF3A2-203ENST00000587637 PTF1AQ7RTS3 328 aa24.15■■□□□ 1.46
SF3A2-203ENST00000587637 OVOS2A0A0G2JMS6 1433 aa24.15■■□□□ 1.46
SF3A2-203ENST00000587637 OVOS2A0A0J9YW53 1432 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms