RNA–Protein interactions for RNA: ENST00000587427.5

GHDC-207, Transcript of GH3 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GHDC, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-207ENST00000587427 ALKQ9UM73 1620 aa20.48■□□□□ 0.87
GHDC-207ENST00000587427 AAMPQ13685 434 aa20.48■□□□□ 0.87
GHDC-207ENST00000587427 C14orf93Q9H972 538 aaKnown RBP20.47■□□□□ 0.87
GHDC-207ENST00000587427 STK26Q9P289 416 aa20.47■□□□□ 0.87
GHDC-207ENST00000587427 SETBP1Q9Y6X0 1596 aa20.47■□□□□ 0.87
GHDC-207ENST00000587427 SLC24A1O60721 1099 aa20.46■□□□□ 0.87
GHDC-207ENST00000587427 RBM33Q96EV2 1170 aaKnown RBP20.46■□□□□ 0.87
GHDC-207ENST00000587427 ZNF335Q9H4Z2 1342 aaPredicted RBP20.45■□□□□ 0.86
GHDC-207ENST00000587427 ANTXR1Q9H6X2 564 aa20.44■□□□□ 0.86
GHDC-207ENST00000587427 RRAGDQ9NQL2 400 aaPredicted RBP20.44■□□□□ 0.86
GHDC-207ENST00000587427 PANK1Q8TE04 598 aa20.44■□□□□ 0.86
GHDC-207ENST00000587427 COG6Q9Y2V7 657 aa20.44■□□□□ 0.86
GHDC-207ENST00000587427 PTPRUQ92729 1446 aa20.43■□□□□ 0.86
GHDC-207ENST00000587427 WWC1Q8IX03 1113 aa20.43■□□□□ 0.86
GHDC-207ENST00000587427 SETD1AO15047 1707 aaKnown RBP20.43■□□□□ 0.86
GHDC-207ENST00000587427 POLR3AO14802 1390 aaPredicted RBP20.43■□□□□ 0.86
GHDC-207ENST00000587427 CANXP27824 592 aaKnown RBP20.43■□□□□ 0.86
GHDC-207ENST00000587427 PMFBP1Q8TBY8 1022 aa20.43■□□□□ 0.86
GHDC-207ENST00000587427 TBX22Q9Y458 520 aa20.43■□□□□ 0.86
GHDC-207ENST00000587427 KIAA1210Q9ULL0 1709 aa20.42■□□□□ 0.86
GHDC-207ENST00000587427 L1TD1Q5T7N2 865 aaKnown RBP20.42■□□□□ 0.86
GHDC-207ENST00000587427 ARXQ96QS3 562 aa20.41■□□□□ 0.86
GHDC-207ENST00000587427 TBC1D32Q96NH3 1257 aa20.4■□□□□ 0.86
GHDC-207ENST00000587427 UPF2Q9HAU5 1272 aaKnown RBP20.4■□□□□ 0.86
GHDC-207ENST00000587427 KCNA6P17658 529 aa20.39■□□□□ 0.86
GHDC-207ENST00000587427 CARD14Q9BXL6 1004 aa20.39■□□□□ 0.86
GHDC-207ENST00000587427 TRAK1Q9UPV9 953 aa20.39■□□□□ 0.86
GHDC-207ENST00000587427 AMOTL2Q9Y2J4 779 aa20.39■□□□□ 0.85
GHDC-207ENST00000587427 ADGRB1O14514 1584 aa20.38■□□□□ 0.85
GHDC-207ENST00000587427 RARSP54136 660 aaKnown RBP20.37■□□□□ 0.85
GHDC-207ENST00000587427 STRCP1A6NGW2 1772 aa20.37■□□□□ 0.85
GHDC-207ENST00000587427 SAFB2Q14151 953 aaKnown RBP eCLIP20.37■□□□□ 0.85
GHDC-207ENST00000587427 WAPLQ7Z5K2 1190 aa20.35■□□□□ 0.85
GHDC-207ENST00000587427 YTHDC2Q9H6S0 1430 aaKnown RBP20.35■□□□□ 0.85
GHDC-207ENST00000587427 SPRYD3Q8NCJ5 442 aa20.35■□□□□ 0.85
GHDC-207ENST00000587427 PHF23Q9BUL5 403 aaPredicted RBP20.35■□□□□ 0.85
GHDC-207ENST00000587427 TBC1D2Q9BYX2 928 aa20.35■□□□□ 0.85
GHDC-207ENST00000587427 PCDHB15Q9Y5E8 787 aa20.35■□□□□ 0.85
GHDC-207ENST00000587427 DIP2AQ14689 1571 aa20.34■□□□□ 0.85
GHDC-207ENST00000587427 PDZRN3Q9UPQ7 1066 aa20.33■□□□□ 0.85
GHDC-207ENST00000587427 ROBO2Q9HCK4 1378 aa20.33■□□□□ 0.85
GHDC-207ENST00000587427 IQSEC2Q5JU85 1478 aa20.33■□□□□ 0.85
GHDC-207ENST00000587427 WDR63Q8IWG1 891 aa20.32■□□□□ 0.84
GHDC-207ENST00000587427 RUNDC1Q96C34 613 aa20.32■□□□□ 0.84
GHDC-207ENST00000587427 CHD2O14647 1828 aaKnown RBP20.32■□□□□ 0.84
GHDC-207ENST00000587427 XRCC6P12956 609 aaKnown RBP eCLIP20.32■□□□□ 0.84
GHDC-207ENST00000587427 SBNO2Q9Y2G9 1366 aa20.32■□□□□ 0.84
GHDC-207ENST00000587427 RWDD1Q9H446 243 aaPredicted RBP20.31■□□□□ 0.84
GHDC-207ENST00000587427 GZF1Q9H116 711 aaPredicted RBP20.31■□□□□ 0.84
GHDC-207ENST00000587427 TNNQ9UQP3 1299 aa20.31■□□□□ 0.84
GHDC-207ENST00000587427 RLBP1P12271 317 aa20.3■□□□□ 0.84
GHDC-207ENST00000587427 NEUROD2Q15784 382 aa20.3■□□□□ 0.84
GHDC-207ENST00000587427 PRAM1Q96QH2 718 aa20.3■□□□□ 0.84
GHDC-207ENST00000587427 SHPRHQ149N8 1683 aa20.3■□□□□ 0.84
GHDC-207ENST00000587427 FSD2A1L4K1 749 aa20.28■□□□□ 0.84
GHDC-207ENST00000587427 CCDC27Q2M243 656 aa20.28■□□□□ 0.84
GHDC-207ENST00000587427 PANK2Q9BZ23 570 aa20.28■□□□□ 0.84
GHDC-207ENST00000587427 PROSER2Q86WR7 435 aaPredicted RBP20.28■□□□□ 0.84
GHDC-207ENST00000587427 TCP11L2Q8N4U5 519 aa20.28■□□□□ 0.84
GHDC-207ENST00000587427 XRN1Q8IZH2 1706 aaKnown RBP20.28■□□□□ 0.84
GHDC-207ENST00000587427 GOLGA6L3A6NEY3 463 aa20.27■□□□□ 0.84
GHDC-207ENST00000587427 NCBP3Q53F19 620 aaKnown RBP20.27■□□□□ 0.84
GHDC-207ENST00000587427 PIK3R4Q99570 1358 aa20.27■□□□□ 0.84
GHDC-207ENST00000587427 RRP7AQ9Y3A4 280 aaKnown RBP20.27■□□□□ 0.83
GHDC-207ENST00000587427 MCM4P33991 863 aa20.26■□□□□ 0.83
GHDC-207ENST00000587427 ABCC11Q96J66 1382 aa20.26■□□□□ 0.83
GHDC-207ENST00000587427 BCL2L13Q9BXK5 485 aa20.26■□□□□ 0.83
GHDC-207ENST00000587427 MORC1Q86VD1 984 aa20.26■□□□□ 0.83
GHDC-207ENST00000587427 NWD1Q149M9 1564 aa20.25■□□□□ 0.83
GHDC-207ENST00000587427 NSD3Q9BZ95 1437 aa20.24■□□□□ 0.83
GHDC-207ENST00000587427 TMEM94Q12767 1356 aa20.24■□□□□ 0.83
GHDC-207ENST00000587427 LTBP4Q8N2S1 1624 aa20.24■□□□□ 0.83
GHDC-207ENST00000587427 ARHGEF28Q8N1W1 1705 aaKnown RBP20.23■□□□□ 0.83
GHDC-207ENST00000587427 MVPQ14764 893 aaKnown RBP20.23■□□□□ 0.83
GHDC-207ENST00000587427 MINK1Q8N4C8 1332 aaPredicted RBP20.22■□□□□ 0.83
GHDC-207ENST00000587427 C14orf37Q86TY3 774 aa20.22■□□□□ 0.83
GHDC-207ENST00000587427 MYH16Q9H6N6 1097 aa20.22■□□□□ 0.83
GHDC-207ENST00000587427 CHMP5Q9NZZ3 219 aa20.22■□□□□ 0.83
GHDC-207ENST00000587427 LRRC7Q96NW7 1537 aa20.22■□□□□ 0.83
GHDC-207ENST00000587427 TECPR2O15040 1411 aa20.22■□□□□ 0.83
GHDC-207ENST00000587427 CPS1P31327 1500 aa20.21■□□□□ 0.83
GHDC-207ENST00000587427 NAP1L5Q96NT1 182 aaPredicted RBP20.2■□□□□ 0.82
GHDC-207ENST00000587427 C22orf23Q9BZE7 217 aa20.2■□□□□ 0.82
GHDC-207ENST00000587427 PTCH1Q13635 1447 aa20.2■□□□□ 0.82
GHDC-207ENST00000587427 NUTM2FA1L443 756 aa20.2■□□□□ 0.82
GHDC-207ENST00000587427 TNNT2P45379 298 aaPredicted RBP20.2■□□□□ 0.82
GHDC-207ENST00000587427 KNDC1Q76NI1 1749 aa20.19■□□□□ 0.82
GHDC-207ENST00000587427 CT47B1P0C2W7 299 aaPredicted RBP20.19■□□□□ 0.82
GHDC-207ENST00000587427 TRAK2O60296 914 aa20.19■□□□□ 0.82
GHDC-207ENST00000587427 ZKSCAN2Q63HK3 967 aa20.19■□□□□ 0.82
GHDC-207ENST00000587427 PNNQ9H307 717 aaKnown RBP20.19■□□□□ 0.82
GHDC-207ENST00000587427 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.18■□□□□ 0.82
GHDC-207ENST00000587427 XIRP1Q702N8 1843 aaKnown RBP20.18■□□□□ 0.82
GHDC-207ENST00000587427 USP32Q8NFA0 1604 aa20.18■□□□□ 0.82
GHDC-207ENST00000587427 CFAP53Q96M91 514 aa20.17■□□□□ 0.82
GHDC-207ENST00000587427 DZIP1LQ8IYY4 767 aaKnown RBP20.17■□□□□ 0.82
GHDC-207ENST00000587427 CLCN1P35523 988 aa20.16■□□□□ 0.82
GHDC-207ENST00000587427 MFAP1P55081 439 aaKnown RBP20.16■□□□□ 0.82
GHDC-207ENST00000587427 HDAC1Q13547 482 aaPredicted RBP20.16■□□□□ 0.82
GHDC-207ENST00000587427 DLC1Q96QB1 1528 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms