RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 SLIT2O94813 1529 aa25.25■■□□□ 1.63
TPM4-206ENST00000587201 ABCA3Q99758 1704 aa25.25■■□□□ 1.63
TPM4-206ENST00000587201 PPIP5K1Q6PFW1 1433 aa25.22■■□□□ 1.63
TPM4-206ENST00000587201 EVC2Q86UK5 1308 aa25.22■■□□□ 1.63
TPM4-206ENST00000587201 GJD4Q96KN9 370 aaPredicted RBP25.21■■□□□ 1.63
TPM4-206ENST00000587201 CARD11Q9BXL7 1154 aa25.21■■□□□ 1.63
TPM4-206ENST00000587201 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.2■■□□□ 1.63
TPM4-206ENST00000587201 UPF1Q92900 1129 aaKnown RBP eCLIP25.2■■□□□ 1.62
TPM4-206ENST00000587201 FAM83GA6ND36 823 aa25.19■■□□□ 1.62
TPM4-206ENST00000587201 NUTM2GQ5VZR2 741 aa25.17■■□□□ 1.62
TPM4-206ENST00000587201 CABP1Q9NZU7 370 aa25.17■■□□□ 1.62
TPM4-206ENST00000587201 PLCH1Q4KWH8 1693 aa25.17■■□□□ 1.62
TPM4-206ENST00000587201 RALGAPBQ86X10 1494 aa25.15■■□□□ 1.62
TPM4-206ENST00000587201 VPS72Q15906 364 aa25.14■■□□□ 1.62
TPM4-206ENST00000587201 ABTB2Q8N961 1025 aa25.14■■□□□ 1.62
TPM4-206ENST00000587201 CCDC9Q9Y3X0 531 aaKnown RBP25.14■■□□□ 1.62
TPM4-206ENST00000587201 NWD2Q9ULI1 1742 aa25.14■■□□□ 1.61
TPM4-206ENST00000587201 CRYBG1Q9Y4K1 1723 aa25.13■■□□□ 1.61
TPM4-206ENST00000587201 BTG4Q9NY30 223 aa25.13■■□□□ 1.61
TPM4-206ENST00000587201 GLI3P10071 1580 aa25.11■■□□□ 1.61
TPM4-206ENST00000587201 PRDM11Q9NQV5 511 aa25.11■■□□□ 1.61
TPM4-206ENST00000587201 COL14A1Q05707 1796 aaKnown RBP25.1■■□□□ 1.61
TPM4-206ENST00000587201 BRD4O60885 1362 aaPredicted RBP25.09■■□□□ 1.61
TPM4-206ENST00000587201 ATAD2Q6PL18 1390 aa25.09■■□□□ 1.61
TPM4-206ENST00000587201 PHRF1Q9P1Y6 1649 aaKnown RBP25.08■■□□□ 1.61
TPM4-206ENST00000587201 ZC3H6P61129 1189 aaKnown RBP25.08■■□□□ 1.61
TPM4-206ENST00000587201 PCGF6Q9BYE7 350 aa25.08■■□□□ 1.61
TPM4-206ENST00000587201 USP6P35125 1406 aa25.08■■□□□ 1.61
TPM4-206ENST00000587201 KIAA0232Q92628 1395 aa25.07■■□□□ 1.6
TPM4-206ENST00000587201 SBNO2Q9Y2G9 1366 aa25.07■■□□□ 1.6
TPM4-206ENST00000587201 NLRP13Q86W25 1043 aa25.07■■□□□ 1.6
TPM4-206ENST00000587201 CHRNA2Q15822 529 aa25.05■■□□□ 1.6
TPM4-206ENST00000587201 NRAPQ86VF7 1730 aa25.05■■□□□ 1.6
TPM4-206ENST00000587201 ZNF692Q9BU19 519 aaPredicted RBP25.04■■□□□ 1.6
TPM4-206ENST00000587201 SEPT12Q8IYM1 358 aa25.03■■□□□ 1.6
TPM4-206ENST00000587201 USP19O94966 1318 aa25.03■■□□□ 1.6
TPM4-206ENST00000587201 NRKQ7Z2Y5 1582 aa25.01■■□□□ 1.59
TPM4-206ENST00000587201 NLRP6P59044 892 aa25.01■■□□□ 1.59
TPM4-206ENST00000587201 A0A0G2JS52 829 aa25■■□□□ 1.59
TPM4-206ENST00000587201 ONECUT3O60422 494 aaPredicted RBP25■■□□□ 1.59
TPM4-206ENST00000587201 GCP02774 474 aa25■■□□□ 1.59
TPM4-206ENST00000587201 MYT1Q01538 1121 aa25■■□□□ 1.59
TPM4-206ENST00000587201 SSH2Q76I76 1423 aa25■■□□□ 1.59
TPM4-206ENST00000587201 SPATA31A5Q5VU36 1347 aa24.98■■□□□ 1.59
TPM4-206ENST00000587201 TTC21BQ7Z4L5 1316 aa24.98■■□□□ 1.59
TPM4-206ENST00000587201 SPATA31A7Q8IWB4 1347 aa24.98■■□□□ 1.59
TPM4-206ENST00000587201 CLSPNQ9HAW4 1339 aa24.98■■□□□ 1.59
TPM4-206ENST00000587201 FAM98CQ17RN3 349 aaKnown RBP24.98■■□□□ 1.59
TPM4-206ENST00000587201 STRN4Q9NRL3 753 aa24.98■■□□□ 1.59
TPM4-206ENST00000587201 CPDO75976 1380 aa24.97■■□□□ 1.59
TPM4-206ENST00000587201 ST20-MTHFSA0A0A6YYL1 179 aa24.97■■□□□ 1.59
TPM4-206ENST00000587201 TMC1Q8TDI8 760 aa24.97■■□□□ 1.59
TPM4-206ENST00000587201 CPSF1Q10570 1443 aaKnown RBP24.96■■□□□ 1.59
TPM4-206ENST00000587201 KTN1Q86UP2 1357 aaKnown RBP24.96■■□□□ 1.59
TPM4-206ENST00000587201 AKAP12Q02952 1782 aa24.96■■□□□ 1.59
TPM4-206ENST00000587201 EVA1CP58658 441 aa24.95■■□□□ 1.58
TPM4-206ENST00000587201 TTC21AQ8NDW8 1320 aa24.94■■□□□ 1.58
TPM4-206ENST00000587201 BRWD3Q6RI45 1802 aa24.94■■□□□ 1.58
TPM4-206ENST00000587201 ZBTB7CA1YPR0 619 aa24.94■■□□□ 1.58
TPM4-206ENST00000587201 KRT27Q7Z3Y8 459 aa24.94■■□□□ 1.58
TPM4-206ENST00000587201 TIMELESSQ9UNS1 1208 aa24.94■■□□□ 1.58
TPM4-206ENST00000587201 PIK3C2AO00443 1686 aa24.94■■□□□ 1.58
TPM4-206ENST00000587201 TESK2Q96S53 571 aa24.93■■□□□ 1.58
TPM4-206ENST00000587201 PUS7Q96PZ0 661 aaKnown RBP24.92■■□□□ 1.58
TPM4-206ENST00000587201 SLIT3O75094 1523 aa24.91■■□□□ 1.58
TPM4-206ENST00000587201 SPATA31A1Q5TZJ5 1347 aa24.91■■□□□ 1.58
TPM4-206ENST00000587201 SLC24A1O60721 1099 aa24.91■■□□□ 1.58
TPM4-206ENST00000587201 HDGFL2Q7Z4V5 671 aaPredicted RBP24.91■■□□□ 1.58
TPM4-206ENST00000587201 CCDC125Q86Z20 511 aa24.91■■□□□ 1.58
TPM4-206ENST00000587201 SLC12A5Q9H2X9 1139 aa24.91■■□□□ 1.58
TPM4-206ENST00000587201 CAMTA1Q9Y6Y1 1673 aa24.91■■□□□ 1.58
TPM4-206ENST00000587201 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.89■■□□□ 1.58
TPM4-206ENST00000587201 USP35Q9P2H5 1018 aa24.89■■□□□ 1.58
TPM4-206ENST00000587201 USP47Q96K76 1375 aa24.89■■□□□ 1.57
TPM4-206ENST00000587201 LMO7Q8WWI1 1683 aa24.88■■□□□ 1.57
TPM4-206ENST00000587201 CD163L1Q9NR16 1453 aa24.88■■□□□ 1.57
TPM4-206ENST00000587201 MON2Q7Z3U7 1717 aa24.87■■□□□ 1.57
TPM4-206ENST00000587201 SOX12O15370 315 aa24.87■■□□□ 1.57
TPM4-206ENST00000587201 LARP1Q6PKG0 1096 aaKnown RBP24.87■■□□□ 1.57
TPM4-206ENST00000587201 KCNH5Q8NCM2 988 aa24.87■■□□□ 1.57
TPM4-206ENST00000587201 CCER1Q8TC90 406 aaPredicted RBP24.87■■□□□ 1.57
TPM4-206ENST00000587201 TERF2IPQ9NYB0 399 aa24.87■■□□□ 1.57
TPM4-206ENST00000587201 EP400Q96L91 3159 aa24.85■■□□□ 1.57
TPM4-206ENST00000587201 BLMP54132 1417 aaPredicted RBP24.85■■□□□ 1.57
TPM4-206ENST00000587201 AATKQ6ZMQ8 1374 aa24.84■■□□□ 1.57
TPM4-206ENST00000587201 COL5A2P05997 1499 aaPredicted RBP24.83■■□□□ 1.57
TPM4-206ENST00000587201 A0A1W2PP64 1363 aa24.83■■□□□ 1.57
TPM4-206ENST00000587201 THSD7AQ9UPZ6 1657 aa24.83■■□□□ 1.57
TPM4-206ENST00000587201 TMF1P82094 1093 aa24.83■■□□□ 1.57
TPM4-206ENST00000587201 SF3B2Q13435 895 aaKnown RBP24.83■■□□□ 1.57
TPM4-206ENST00000587201 ZRANB1Q9UGI0 708 aa24.83■■□□□ 1.57
TPM4-206ENST00000587201 NINLQ9Y2I6 1382 aa24.82■■□□□ 1.56
TPM4-206ENST00000587201 NME9Q86XW9 330 aa24.82■■□□□ 1.56
TPM4-206ENST00000587201 TCP11L2Q8N4U5 519 aa24.82■■□□□ 1.56
TPM4-206ENST00000587201 EDC4Q6P2E9 1401 aaKnown RBP24.81■■□□□ 1.56
TPM4-206ENST00000587201 BARGINQ6ZT62 677 aa24.81■■□□□ 1.56
TPM4-206ENST00000587201 ARHGEF25Q86VW2 580 aa24.81■■□□□ 1.56
TPM4-206ENST00000587201 USP31Q70CQ4 1352 aa24.8■■□□□ 1.56
TPM4-206ENST00000587201 FAM182BQ5T319 152 aa24.79■■□□□ 1.56
TPM4-206ENST00000587201 THRAP3Q9Y2W1 955 aaKnown RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms