RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 MON2Q7Z3U7 1717 aa27.53■■■□□ 2
ATG4D-204ENST00000586417 BRINP3Q76B58 766 aa27.53■■■□□ 2
ATG4D-204ENST00000586417 GTF3C3Q9Y5Q9 886 aa27.53■■■□□ 2
ATG4D-204ENST00000586417 FOXO3O43524 673 aa27.52■■■□□ 2
ATG4D-204ENST00000586417 DDX17Q92841 729 aaKnown RBP27.51■■□□□ 1.99
ATG4D-204ENST00000586417 KIF1AQ12756 1690 aa27.5■■□□□ 1.99
ATG4D-204ENST00000586417 ZNF692Q9BU19 519 aaPredicted RBP27.5■■□□□ 1.99
ATG4D-204ENST00000586417 CGNL1Q0VF96 1302 aa27.49■■□□□ 1.99
ATG4D-204ENST00000586417 ZBED9Q6R2W3 1325 aa27.49■■□□□ 1.99
ATG4D-204ENST00000586417 USP6P35125 1406 aa27.49■■□□□ 1.99
ATG4D-204ENST00000586417 XPCQ01831 940 aaPredicted RBP27.48■■□□□ 1.99
ATG4D-204ENST00000586417 IQSEC2Q5JU85 1478 aa27.47■■□□□ 1.99
ATG4D-204ENST00000586417 NSD2O96028 1365 aa27.47■■□□□ 1.99
ATG4D-204ENST00000586417 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.47■■□□□ 1.99
ATG4D-204ENST00000586417 NRKQ7Z2Y5 1582 aa27.46■■□□□ 1.99
ATG4D-204ENST00000586417 EDC4Q6P2E9 1401 aaKnown RBP27.46■■□□□ 1.99
ATG4D-204ENST00000586417 PSME1Q06323 249 aa27.45■■□□□ 1.99
ATG4D-204ENST00000586417 SSH2Q76I76 1423 aa27.44■■□□□ 1.98
ATG4D-204ENST00000586417 INSRP06213 1382 aa27.44■■□□□ 1.98
ATG4D-204ENST00000586417 ROBO1Q9Y6N7 1651 aa27.44■■□□□ 1.98
ATG4D-204ENST00000586417 UBAP1LF5GYI3 381 aa27.43■■□□□ 1.98
ATG4D-204ENST00000586417 TOM1O60784 492 aa27.43■■□□□ 1.98
ATG4D-204ENST00000586417 TTC21BQ7Z4L5 1316 aa27.42■■□□□ 1.98
ATG4D-204ENST00000586417 MORC1Q86VD1 984 aa27.42■■□□□ 1.98
ATG4D-204ENST00000586417 FYB1O15117 783 aa27.4■■□□□ 1.98
ATG4D-204ENST00000586417 PIP4K2BP78356 416 aa27.4■■□□□ 1.98
ATG4D-204ENST00000586417 KRT28Q7Z3Y7 464 aa27.4■■□□□ 1.98
ATG4D-204ENST00000586417 NME9Q86XW9 330 aa27.4■■□□□ 1.98
ATG4D-204ENST00000586417 BLMP54132 1417 aaPredicted RBP27.39■■□□□ 1.98
ATG4D-204ENST00000586417 ZRANB1Q9UGI0 708 aa27.39■■□□□ 1.98
ATG4D-204ENST00000586417 NPHP3Q7Z494 1330 aa27.39■■□□□ 1.97
ATG4D-204ENST00000586417 ANKRD26Q9UPS8 1709 aa27.39■■□□□ 1.97
ATG4D-204ENST00000586417 KIF20BQ96Q89 1820 aa27.39■■□□□ 1.97
ATG4D-204ENST00000586417 PAK3O75914 559 aaPredicted RBP27.38■■□□□ 1.97
ATG4D-204ENST00000586417 GGNBP2Q9H3C7 697 aa27.38■■□□□ 1.97
ATG4D-204ENST00000586417 TRPM3Q9HCF6 1732 aaPredicted RBP27.38■■□□□ 1.97
ATG4D-204ENST00000586417 PXDNQ92626 1479 aa27.37■■□□□ 1.97
ATG4D-204ENST00000586417 NHSL1Q5SYE7 1610 aa27.36■■□□□ 1.97
ATG4D-204ENST00000586417 PIK3C2AO00443 1686 aa27.34■■□□□ 1.97
ATG4D-204ENST00000586417 TTC21AQ8NDW8 1320 aa27.33■■□□□ 1.97
ATG4D-204ENST00000586417 NUTM2GQ5VZR2 741 aa27.32■■□□□ 1.96
ATG4D-204ENST00000586417 ABTB2Q8N961 1025 aa27.31■■□□□ 1.96
ATG4D-204ENST00000586417 ADAMTS8Q9UP79 889 aa27.31■■□□□ 1.96
ATG4D-204ENST00000586417 SOS2Q07890 1332 aaPredicted RBP27.31■■□□□ 1.96
ATG4D-204ENST00000586417 TNNT2P45379 298 aaPredicted RBP27.3■■□□□ 1.96
ATG4D-204ENST00000586417 ALS2Q96Q42 1657 aa27.28■■□□□ 1.96
ATG4D-204ENST00000586417 LMOD2Q6P5Q4 547 aa27.28■■□□□ 1.96
ATG4D-204ENST00000586417 MARF1Q9Y4F3 1742 aaKnown RBP27.28■■□□□ 1.96
ATG4D-204ENST00000586417 WDR43Q15061 677 aaKnown RBP eCLIP27.27■■□□□ 1.96
ATG4D-204ENST00000586417 AHDC1Q5TGY3 1603 aaPredicted RBP27.27■■□□□ 1.96
ATG4D-204ENST00000586417 SBNO1A3KN83 1393 aa27.27■■□□□ 1.96
ATG4D-204ENST00000586417 SHPRHQ149N8 1683 aa27.27■■□□□ 1.96
ATG4D-204ENST00000586417 NLRP6P59044 892 aa27.27■■□□□ 1.96
ATG4D-204ENST00000586417 SENP3-EIF4A1A0A087X0R7 540 aa27.26■■□□□ 1.95
ATG4D-204ENST00000586417 SPATA31A3Q5VYP0 1347 aa27.25■■□□□ 1.95
ATG4D-204ENST00000586417 OVOS2A0A0J9YW53 1432 aa27.25■■□□□ 1.95
ATG4D-204ENST00000586417 TNS3Q68CZ2 1445 aa27.25■■□□□ 1.95
ATG4D-204ENST00000586417 OVOS2Q6IE36 1432 aa27.25■■□□□ 1.95
ATG4D-204ENST00000586417 FBLN1P23142 703 aa27.25■■□□□ 1.95
ATG4D-204ENST00000586417 COG3Q96JB2 828 aa27.25■■□□□ 1.95
ATG4D-204ENST00000586417 PLEKHG5O94827 1062 aa27.24■■□□□ 1.95
ATG4D-204ENST00000586417 MTHFSP49914 203 aa27.24■■□□□ 1.95
ATG4D-204ENST00000586417 PHLPP1O60346 1717 aa27.24■■□□□ 1.95
ATG4D-204ENST00000586417 USP31Q70CQ4 1352 aa27.24■■□□□ 1.95
ATG4D-204ENST00000586417 USP54Q70EL1 1684 aa27.21■■□□□ 1.95
ATG4D-204ENST00000586417 SMG6Q86US8 1419 aaKnown RBP27.2■■□□□ 1.94
ATG4D-204ENST00000586417 COL16A1Q07092 1604 aaPredicted RBP27.19■■□□□ 1.94
ATG4D-204ENST00000586417 SOX12O15370 315 aa27.19■■□□□ 1.94
ATG4D-204ENST00000586417 MED1Q15648 1581 aaPredicted RBP27.16■■□□□ 1.94
ATG4D-204ENST00000586417 CABLES1Q8TDN4 633 aa27.16■■□□□ 1.94
ATG4D-204ENST00000586417 COL3A1P02461 1466 aaPredicted RBP27.16■■□□□ 1.94
ATG4D-204ENST00000586417 MAP2P11137 1827 aaKnown RBP27.15■■□□□ 1.94
ATG4D-204ENST00000586417 LRRC59Q96AG4 307 aaKnown RBP27.15■■□□□ 1.94
ATG4D-204ENST00000586417 CFAP53Q96M91 514 aa27.15■■□□□ 1.94
ATG4D-204ENST00000586417 ARHGEF10O15013 1369 aa27.15■■□□□ 1.94
ATG4D-204ENST00000586417 USP19O94966 1318 aa27.14■■□□□ 1.93
ATG4D-204ENST00000586417 NUDCQ9Y266 331 aa27.13■■□□□ 1.93
ATG4D-204ENST00000586417 SALL2Q9Y467 1007 aaPredicted RBP27.12■■□□□ 1.93
ATG4D-204ENST00000586417 CRYBG1Q9Y4K1 1723 aa27.12■■□□□ 1.93
ATG4D-204ENST00000586417 RRS1Q15050 365 aaKnown RBP27.12■■□□□ 1.93
ATG4D-204ENST00000586417 SLIT3O75094 1523 aa27.11■■□□□ 1.93
ATG4D-204ENST00000586417 PNPLA6Q8IY17 1366 aa27.1■■□□□ 1.93
ATG4D-204ENST00000586417 GCP02774 474 aa27.1■■□□□ 1.93
ATG4D-204ENST00000586417 PHRF1Q9P1Y6 1649 aaKnown RBP27.1■■□□□ 1.93
ATG4D-204ENST00000586417 PDE3BQ13370 1112 aa27.09■■□□□ 1.93
ATG4D-204ENST00000586417 POLKQ9UBT6 870 aa27.09■■□□□ 1.93
ATG4D-204ENST00000586417 NFAT5O94916 1531 aa27.09■■□□□ 1.93
ATG4D-204ENST00000586417 AATKQ6ZMQ8 1374 aa27.09■■□□□ 1.93
ATG4D-204ENST00000586417 CCDC146Q8IYE0 955 aa27.09■■□□□ 1.93
ATG4D-204ENST00000586417 SUPT16HQ9Y5B9 1047 aaKnown RBP27.09■■□□□ 1.93
ATG4D-204ENST00000586417 EMILIN1Q9Y6C2 1016 aa27.09■■□□□ 1.93
ATG4D-204ENST00000586417 HSPA1LP34931 641 aa27.08■■□□□ 1.93
ATG4D-204ENST00000586417 ABCA3Q99758 1704 aa27.06■■□□□ 1.92
ATG4D-204ENST00000586417 PPM1GO15355 546 aaPredicted RBP27.06■■□□□ 1.92
ATG4D-204ENST00000586417 KCNH5Q8NCM2 988 aa27.05■■□□□ 1.92
ATG4D-204ENST00000586417 MAP3K19Q56UN5 1328 aa27.05■■□□□ 1.92
ATG4D-204ENST00000586417 ZNF521Q96K83 1311 aa27.05■■□□□ 1.92
ATG4D-204ENST00000586417 LTN1O94822 1766 aa27.04■■□□□ 1.92
ATG4D-204ENST00000586417 COL22A1Q8NFW1 1626 aaPredicted RBP27.04■■□□□ 1.92
ATG4D-204ENST00000586417 PEAK1Q9H792 1746 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms