RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 CRYBG1Q9Y4K1 1723 aa17.55■□□□□ 0.4
BRCA1-225ENST00000586385 DCAF11Q8TEB1 546 aa17.55■□□□□ 0.4
BRCA1-225ENST00000586385 COL14A1Q05707 1796 aaKnown RBP17.55■□□□□ 0.4
BRCA1-225ENST00000586385 ATP7BP35670 1465 aa17.54■□□□□ 0.4
BRCA1-225ENST00000586385 EIF3AQ14152 1382 aaKnown RBP17.53■□□□□ 0.4
BRCA1-225ENST00000586385 A0A0G2JS52 829 aa17.53■□□□□ 0.4
BRCA1-225ENST00000586385 PSDA5PKW4 1024 aaPredicted RBP17.53■□□□□ 0.4
BRCA1-225ENST00000586385 MYT1Q01538 1121 aa17.53■□□□□ 0.4
BRCA1-225ENST00000586385 THSD7AQ9UPZ6 1657 aa17.52■□□□□ 0.4
BRCA1-225ENST00000586385 LRP5O75197 1615 aa17.52■□□□□ 0.4
BRCA1-225ENST00000586385 NGDNQ8NEJ9 315 aaKnown RBP17.52■□□□□ 0.4
BRCA1-225ENST00000586385 HRCP23327 699 aa17.51■□□□□ 0.39
BRCA1-225ENST00000586385 BAG6P46379 1132 aa17.51■□□□□ 0.39
BRCA1-225ENST00000586385 EN1Q05925 392 aaPredicted RBP17.51■□□□□ 0.39
BRCA1-225ENST00000586385 KIAA0232Q92628 1395 aa17.51■□□□□ 0.39
BRCA1-225ENST00000586385 NUDT16Q96DE0 195 aaKnown RBP17.5■□□□□ 0.39
BRCA1-225ENST00000586385 PRDM11Q9NQV5 511 aa17.5■□□□□ 0.39
BRCA1-225ENST00000586385 DISP2A7MBM2 1401 aa17.49■□□□□ 0.39
BRCA1-225ENST00000586385 PAK3O75914 559 aaPredicted RBP17.49■□□□□ 0.39
BRCA1-225ENST00000586385 CHRNA2Q15822 529 aa17.49■□□□□ 0.39
BRCA1-225ENST00000586385 SPATA31A1Q5TZJ5 1347 aa17.48■□□□□ 0.39
BRCA1-225ENST00000586385 ARHGEF28Q8N1W1 1705 aaKnown RBP17.48■□□□□ 0.39
BRCA1-225ENST00000586385 STAC3Q96MF2 364 aa17.47■□□□□ 0.39
BRCA1-225ENST00000586385 POLR3AO14802 1390 aaPredicted RBP17.46■□□□□ 0.39
BRCA1-225ENST00000586385 NUTM2GQ5VZR2 741 aa17.46■□□□□ 0.39
BRCA1-225ENST00000586385 CDK19Q9BWU1 502 aa17.46■□□□□ 0.39
BRCA1-225ENST00000586385 TNS1Q9HBL0 1735 aaKnown RBP17.44■□□□□ 0.38
BRCA1-225ENST00000586385 PHRF1Q9P1Y6 1649 aaKnown RBP17.44■□□□□ 0.38
BRCA1-225ENST00000586385 ZC3H6P61129 1189 aaKnown RBP17.44■□□□□ 0.38
BRCA1-225ENST00000586385 ACEP12821 1306 aa17.44■□□□□ 0.38
BRCA1-225ENST00000586385 R3HDM1Q15032 1099 aaKnown RBP17.43■□□□□ 0.38
BRCA1-225ENST00000586385 EZH2Q15910 746 aaKnown RBP17.43■□□□□ 0.38
BRCA1-225ENST00000586385 NBPF8Q3BBV2 869 aa17.43■□□□□ 0.38
BRCA1-225ENST00000586385 CAMKK2Q96RR4 588 aa17.43■□□□□ 0.38
BRCA1-225ENST00000586385 STRN4Q9NRL3 753 aa17.43■□□□□ 0.38
BRCA1-225ENST00000586385 RGPD1P0DJD0 1748 aa17.43■□□□□ 0.38
BRCA1-225ENST00000586385 TOPAZ1Q8N9V7 1692 aa17.42■□□□□ 0.38
BRCA1-225ENST00000586385 PLEKHG3A1L390 1219 aa17.42■□□□□ 0.38
BRCA1-225ENST00000586385 SSH2Q76I76 1423 aa17.41■□□□□ 0.38
BRCA1-225ENST00000586385 TRIM37O94972 964 aa17.41■□□□□ 0.38
BRCA1-225ENST00000586385 NBPF1Q3BBV0 1214 aa17.41■□□□□ 0.38
BRCA1-225ENST00000586385 CCDC61Q9Y6R9 512 aa17.41■□□□□ 0.38
BRCA1-225ENST00000586385 CAMTA1Q9Y6Y1 1673 aa17.41■□□□□ 0.38
BRCA1-225ENST00000586385 USP19O94966 1318 aa17.41■□□□□ 0.38
BRCA1-225ENST00000586385 NRKQ7Z2Y5 1582 aa17.4■□□□□ 0.38
BRCA1-225ENST00000586385 ITSN1Q15811 1721 aa17.4■□□□□ 0.38
BRCA1-225ENST00000586385 LARP1Q6PKG0 1096 aaKnown RBP17.39■□□□□ 0.37
BRCA1-225ENST00000586385 FAM196AQ6ZSG2 479 aa17.39■□□□□ 0.37
BRCA1-225ENST00000586385 BARGINQ6ZT62 677 aa17.39■□□□□ 0.37
BRCA1-225ENST00000586385 CPDO75976 1380 aa17.39■□□□□ 0.37
BRCA1-225ENST00000586385 USP35Q9P2H5 1018 aa17.38■□□□□ 0.37
BRCA1-225ENST00000586385 LMO7Q8WWI1 1683 aa17.38■□□□□ 0.37
BRCA1-225ENST00000586385 APBA3O96018 575 aa17.35■□□□□ 0.37
BRCA1-225ENST00000586385 ABTB2Q8N961 1025 aa17.35■□□□□ 0.37
BRCA1-225ENST00000586385 TCP11L2Q8N4U5 519 aa17.34■□□□□ 0.37
BRCA1-225ENST00000586385 KIAA1210Q9ULL0 1709 aa17.33■□□□□ 0.37
BRCA1-225ENST00000586385 PARD3Q8TEW0 1356 aa17.33■□□□□ 0.36
BRCA1-225ENST00000586385 GCP02774 474 aa17.33■□□□□ 0.36
BRCA1-225ENST00000586385 EVA1CP58658 441 aa17.33■□□□□ 0.36
BRCA1-225ENST00000586385 COL5A2P05997 1499 aaPredicted RBP17.32■□□□□ 0.36
BRCA1-225ENST00000586385 PPIP5K1Q6PFW1 1433 aa17.32■□□□□ 0.36
BRCA1-225ENST00000586385 CABP2Q9NPB3 220 aa17.32■□□□□ 0.36
BRCA1-225ENST00000586385 PDE3BQ13370 1112 aa17.31■□□□□ 0.36
BRCA1-225ENST00000586385 RREB1Q92766 1687 aa17.3■□□□□ 0.36
BRCA1-225ENST00000586385 CENPJQ9HC77 1338 aaPredicted RBP17.3■□□□□ 0.36
BRCA1-225ENST00000586385 SRPK2P78362 688 aaKnown RBP17.29■□□□□ 0.36
BRCA1-225ENST00000586385 NLRP13Q86W25 1043 aa17.29■□□□□ 0.36
BRCA1-225ENST00000586385 THRAP3Q9Y2W1 955 aaKnown RBP17.29■□□□□ 0.36
BRCA1-225ENST00000586385 NUP188Q5SRE5 1749 aa17.29■□□□□ 0.36
BRCA1-225ENST00000586385 USP6P35125 1406 aa17.29■□□□□ 0.36
BRCA1-225ENST00000586385 SLIT3O75094 1523 aa17.27■□□□□ 0.36
BRCA1-225ENST00000586385 CABP1Q9NZU7 370 aa17.27■□□□□ 0.36
BRCA1-225ENST00000586385 BRD4O60885 1362 aaPredicted RBP17.27■□□□□ 0.35
BRCA1-225ENST00000586385 AATKQ6ZMQ8 1374 aa17.27■□□□□ 0.35
BRCA1-225ENST00000586385 PTF1AQ7RTS3 328 aa17.26■□□□□ 0.35
BRCA1-225ENST00000586385 CRB1P82279 1406 aa17.26■□□□□ 0.35
BRCA1-225ENST00000586385 PEAK1Q9H792 1746 aa17.26■□□□□ 0.35
BRCA1-225ENST00000586385 PARP4Q9UKK3 1724 aaKnown RBP17.26■□□□□ 0.35
BRCA1-225ENST00000586385 AXIN2Q9Y2T1 843 aa17.25■□□□□ 0.35
BRCA1-225ENST00000586385 NLRP6P59044 892 aa17.24■□□□□ 0.35
BRCA1-225ENST00000586385 COL18A1P39060 1754 aa17.23■□□□□ 0.35
BRCA1-225ENST00000586385 ZBTB7CA1YPR0 619 aa17.22■□□□□ 0.35
BRCA1-225ENST00000586385 L3MBTL2Q969R5 705 aa17.22■□□□□ 0.35
BRCA1-225ENST00000586385 PIK3C2AO00443 1686 aa17.22■□□□□ 0.35
BRCA1-225ENST00000586385 QRICH2Q9H0J4 1663 aa17.22■□□□□ 0.35
BRCA1-225ENST00000586385 OVOS2A0A0G2JMS6 1433 aa17.21■□□□□ 0.35
BRCA1-225ENST00000586385 OVOS2A0A0J9YW53 1432 aa17.21■□□□□ 0.35
BRCA1-225ENST00000586385 OVOS2Q6IE36 1432 aa17.21■□□□□ 0.35
BRCA1-225ENST00000586385 LRRC37A3O60309 1634 aa17.21■□□□□ 0.35
BRCA1-225ENST00000586385 NBPF14Q5TI25 921 aa17.21■□□□□ 0.35
BRCA1-225ENST00000586385 ANO8Q9HCE9 1232 aaPredicted RBP17.21■□□□□ 0.35
BRCA1-225ENST00000586385 MARCH10Q8NA82 808 aaPredicted RBP17.2■□□□□ 0.34
BRCA1-225ENST00000586385 ARHGEF25Q86VW2 580 aa17.19■□□□□ 0.34
BRCA1-225ENST00000586385 PROM2Q8N271 834 aa17.19■□□□□ 0.34
BRCA1-225ENST00000586385 CPSF1Q10570 1443 aaKnown RBP17.19■□□□□ 0.34
BRCA1-225ENST00000586385 WDR17Q8IZU2 1322 aa17.19■□□□□ 0.34
BRCA1-225ENST00000586385 PLSCR1O15162 318 aa17.18■□□□□ 0.34
BRCA1-225ENST00000586385 DDB1Q16531 1140 aa17.18■□□□□ 0.34
BRCA1-225ENST00000586385 TOM1L2Q6ZVM7 507 aa17.18■□□□□ 0.34
BRCA1-225ENST00000586385 PDGFDQ9GZP0 370 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms