RNA–Protein interactions for RNA: ENST00000586344.5

RANBP3-206, Transcript of RAN binding protein 3, humanhuman

TSL 2

Gene RANBP3, Length 2,554 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-206ENST00000586344 SLKQ9H2G2 1235 aaPredicted RBP17.06■□□□□ 0.32
RANBP3-206ENST00000586344 PTPRMP28827 1452 aa17.06■□□□□ 0.32
RANBP3-206ENST00000586344 TSR2Q969E8 191 aaKnown RBP17.05■□□□□ 0.32
RANBP3-206ENST00000586344 PRAM1Q96QH2 718 aa17.05■□□□□ 0.32
RANBP3-206ENST00000586344 NLRP1Q9C000 1473 aa17.05■□□□□ 0.32
RANBP3-206ENST00000586344 ARHGEF28Q8N1W1 1705 aaKnown RBP17.05■□□□□ 0.32
RANBP3-206ENST00000586344 LTKP29376 864 aa17.05■□□□□ 0.32
RANBP3-206ENST00000586344 CFAP53Q96M91 514 aa17.05■□□□□ 0.32
RANBP3-206ENST00000586344 YTHDC2Q9H6S0 1430 aaKnown RBP17.05■□□□□ 0.32
RANBP3-206ENST00000586344 UBR1Q8IWV7 1749 aa17.04■□□□□ 0.32
RANBP3-206ENST00000586344 CCDC27Q2M243 656 aa17.04■□□□□ 0.32
RANBP3-206ENST00000586344 TMEM2Q9UHN6 1383 aa17.04■□□□□ 0.32
RANBP3-206ENST00000586344 MINK1Q8N4C8 1332 aaPredicted RBP17.04■□□□□ 0.32
RANBP3-206ENST00000586344 WAPLQ7Z5K2 1190 aa17.02■□□□□ 0.32
RANBP3-206ENST00000586344 METP08581 1390 aa17.02■□□□□ 0.32
RANBP3-206ENST00000586344 POGKQ9P215 609 aa17.02■□□□□ 0.31
RANBP3-206ENST00000586344 RIMS1Q86UR5 1692 aaKnown RBP17.01■□□□□ 0.31
RANBP3-206ENST00000586344 MVPQ14764 893 aaKnown RBP17.01■□□□□ 0.31
RANBP3-206ENST00000586344 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.01■□□□□ 0.31
RANBP3-206ENST00000586344 MYH16Q9H6N6 1097 aa17.01■□□□□ 0.31
RANBP3-206ENST00000586344 EVC2Q86UK5 1308 aa17■□□□□ 0.31
RANBP3-206ENST00000586344 NRXN3Q9Y4C0 1643 aa17■□□□□ 0.31
RANBP3-206ENST00000586344 RWDD1Q9H446 243 aaPredicted RBP17■□□□□ 0.31
RANBP3-206ENST00000586344 TXNDC2Q86VQ3 553 aa17■□□□□ 0.31
RANBP3-206ENST00000586344 TBC1D32Q96NH3 1257 aa17■□□□□ 0.31
RANBP3-206ENST00000586344 GGNBP2Q9H3C7 697 aa17■□□□□ 0.31
RANBP3-206ENST00000586344 EXOSC9Q06265 439 aaKnown RBP16.99■□□□□ 0.31
RANBP3-206ENST00000586344 BECN1Q14457 450 aa16.99■□□□□ 0.31
RANBP3-206ENST00000586344 ANKRD36BQ8N2N9 1353 aa16.99■□□□□ 0.31
RANBP3-206ENST00000586344 TULP4Q9NRJ4 1543 aa16.99■□□□□ 0.31
RANBP3-206ENST00000586344 U2SURPO15042 1029 aaKnown RBP16.99■□□□□ 0.31
RANBP3-206ENST00000586344 ZKSCAN2Q63HK3 967 aa16.99■□□□□ 0.31
RANBP3-206ENST00000586344 SLC26A8Q96RN1 970 aa16.99■□□□□ 0.31
RANBP3-206ENST00000586344 DZIP1LQ8IYY4 767 aaKnown RBP16.98■□□□□ 0.31
RANBP3-206ENST00000586344 TBC1D2Q9BYX2 928 aa16.98■□□□□ 0.31
RANBP3-206ENST00000586344 ANTXR1Q9H6X2 564 aa16.98■□□□□ 0.31
RANBP3-206ENST00000586344 AAMPQ13685 434 aa16.98■□□□□ 0.31
RANBP3-206ENST00000586344 SETD1AO15047 1707 aaKnown RBP16.97■□□□□ 0.31
RANBP3-206ENST00000586344 SRPK2P78362 688 aaKnown RBP16.97■□□□□ 0.31
RANBP3-206ENST00000586344 PLEKHF1Q96S99 279 aa16.97■□□□□ 0.31
RANBP3-206ENST00000586344 TRIM35Q9UPQ4 493 aa16.97■□□□□ 0.31
RANBP3-206ENST00000586344 VIRMAQ69YN4 1812 aaKnown RBP16.97■□□□□ 0.31
RANBP3-206ENST00000586344 FTSJ3Q8IY81 847 aaKnown RBP16.97■□□□□ 0.31
RANBP3-206ENST00000586344 SSH1Q8WYL5 1049 aa16.97■□□□□ 0.31
RANBP3-206ENST00000586344 TRIM27P14373 513 aa16.96■□□□□ 0.31
RANBP3-206ENST00000586344 HDGFP51858 240 aaKnown RBP16.96■□□□□ 0.31
RANBP3-206ENST00000586344 SPRYD3Q8NCJ5 442 aa16.96■□□□□ 0.31
RANBP3-206ENST00000586344 SMC4Q9NTJ3 1288 aa16.96■□□□□ 0.31
RANBP3-206ENST00000586344 TMPOP42166 694 aaKnown RBP16.96■□□□□ 0.31
RANBP3-206ENST00000586344 UPF2Q9HAU5 1272 aaKnown RBP16.95■□□□□ 0.3
RANBP3-206ENST00000586344 A0A1W2PP64 1363 aa16.95■□□□□ 0.3
RANBP3-206ENST00000586344 PUS7Q96PZ0 661 aaKnown RBP16.94■□□□□ 0.3
RANBP3-206ENST00000586344 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.94■□□□□ 0.3
RANBP3-206ENST00000586344 ADAMTS13Q76LX8 1427 aa16.93■□□□□ 0.3
RANBP3-206ENST00000586344 USP32Q8NFA0 1604 aa16.93■□□□□ 0.3
RANBP3-206ENST00000586344 EID1Q9Y6B2 187 aa16.93■□□□□ 0.3
RANBP3-206ENST00000586344 ITPRIPQ8IWB1 547 aa16.92■□□□□ 0.3
RANBP3-206ENST00000586344 NOB1Q9ULX3 412 aaKnown RBP16.92■□□□□ 0.3
RANBP3-206ENST00000586344 NSD2O96028 1365 aa16.92■□□□□ 0.3
RANBP3-206ENST00000586344 FYB1O15117 783 aa16.92■□□□□ 0.3
RANBP3-206ENST00000586344 NCBP3Q53F19 620 aaKnown RBP16.92■□□□□ 0.3
RANBP3-206ENST00000586344 THEMISQ8N1K5 641 aaPredicted RBP16.92■□□□□ 0.3
RANBP3-206ENST00000586344 ADAMTSL3P82987 1691 aa16.91■□□□□ 0.3
RANBP3-206ENST00000586344 MFAP1P55081 439 aaKnown RBP16.91■□□□□ 0.3
RANBP3-206ENST00000586344 CDK19Q9BWU1 502 aa16.91■□□□□ 0.3
RANBP3-206ENST00000586344 ABCC11Q96J66 1382 aa16.91■□□□□ 0.3
RANBP3-206ENST00000586344 ATF7IPQ6VMQ6 1270 aa16.9■□□□□ 0.3
RANBP3-206ENST00000586344 TMEM57Q8N5G2 664 aa16.9■□□□□ 0.3
RANBP3-206ENST00000586344 FBLN1P23142 703 aa16.9■□□□□ 0.3
RANBP3-206ENST00000586344 RIPK4P57078 832 aa16.9■□□□□ 0.3
RANBP3-206ENST00000586344 ADGRB2O60241 1585 aa16.9■□□□□ 0.3
RANBP3-206ENST00000586344 PLEKHG1Q9ULL1 1385 aa16.9■□□□□ 0.3
RANBP3-206ENST00000586344 CT47B1P0C2W7 299 aaPredicted RBP16.88■□□□□ 0.29
RANBP3-206ENST00000586344 C22orf23Q9BZE7 217 aa16.88■□□□□ 0.29
RANBP3-206ENST00000586344 CEP170BQ9Y4F5 1589 aaPredicted RBP16.88■□□□□ 0.29
RANBP3-206ENST00000586344 HDAC1Q13547 482 aaPredicted RBP16.88■□□□□ 0.29
RANBP3-206ENST00000586344 ROBO2Q9HCK4 1378 aa16.88■□□□□ 0.29
RANBP3-206ENST00000586344 SLIT1O75093 1534 aa16.88■□□□□ 0.29
RANBP3-206ENST00000586344 ARHGAP23Q9P227 1491 aa16.88■□□□□ 0.29
RANBP3-206ENST00000586344 DDX19BQ9UMR2 479 aa16.87■□□□□ 0.29
RANBP3-206ENST00000586344 COL3A1P02461 1466 aaPredicted RBP16.87■□□□□ 0.29
RANBP3-206ENST00000586344 NCKAP5LQ9HCH0 1330 aa16.87■□□□□ 0.29
RANBP3-206ENST00000586344 SMC5Q8IY18 1101 aa16.85■□□□□ 0.29
RANBP3-206ENST00000586344 ZBTB40Q9NUA8 1239 aa16.85■□□□□ 0.29
RANBP3-206ENST00000586344 CABP1Q9NZU7 370 aa16.85■□□□□ 0.29
RANBP3-206ENST00000586344 DLC1Q96QB1 1528 aa16.85■□□□□ 0.29
RANBP3-206ENST00000586344 PTPRUQ92729 1446 aa16.85■□□□□ 0.29
RANBP3-206ENST00000586344 NUTM2FA1L443 756 aa16.84■□□□□ 0.29
RANBP3-206ENST00000586344 ARXQ96QS3 562 aa16.84■□□□□ 0.29
RANBP3-206ENST00000586344 DIAPH1O60610 1272 aaKnown RBP16.84■□□□□ 0.29
RANBP3-206ENST00000586344 CD163L1Q9NR16 1453 aa16.83■□□□□ 0.29
RANBP3-206ENST00000586344 TERF2IPQ9NYB0 399 aa16.83■□□□□ 0.28
RANBP3-206ENST00000586344 AMOTL2Q9Y2J4 779 aa16.83■□□□□ 0.28
RANBP3-206ENST00000586344 MED14O60244 1454 aa16.82■□□□□ 0.28
RANBP3-206ENST00000586344 LNPKQ9C0E8 428 aa16.82■□□□□ 0.28
RANBP3-206ENST00000586344 IL16Q14005 1332 aa16.82■□□□□ 0.28
RANBP3-206ENST00000586344 THUMPD2Q9BTF0 503 aaKnown RBP16.82■□□□□ 0.28
RANBP3-206ENST00000586344 ATAD2Q6PL18 1390 aa16.81■□□□□ 0.28
RANBP3-206ENST00000586344 WASLO00401 505 aaPredicted RBP16.81■□□□□ 0.28
RANBP3-206ENST00000586344 MCM4P33991 863 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms