RNA–Protein interactions for RNA: ENST00000583821.1

MSI2-218, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-218ENST00000583821 DLC1Q96QB1 1528 aa11.99□□□□□ -0.49
MSI2-218ENST00000583821 ARHGEF28Q8N1W1 1705 aaKnown RBP11.99□□□□□ -0.49
MSI2-218ENST00000583821 FNBP4Q8N3X1 1017 aaPredicted RBP11.98□□□□□ -0.49
MSI2-218ENST00000583821 C14orf93Q9H972 538 aaKnown RBP11.98□□□□□ -0.49
MSI2-218ENST00000583821 CRYBG1Q9Y4K1 1723 aa11.97□□□□□ -0.49
MSI2-218ENST00000583821 TNS3Q68CZ2 1445 aa11.97□□□□□ -0.49
MSI2-218ENST00000583821 PLEKHG5O94827 1062 aa11.97□□□□□ -0.49
MSI2-218ENST00000583821 TRPC5Q9UL62 973 aaPredicted RBP11.97□□□□□ -0.49
MSI2-218ENST00000583821 NRAPQ86VF7 1730 aa11.97□□□□□ -0.49
MSI2-218ENST00000583821 NWD2Q9ULI1 1742 aa11.97□□□□□ -0.49
MSI2-218ENST00000583821 ALS2Q96Q42 1657 aa11.97□□□□□ -0.49
MSI2-218ENST00000583821 DHX57Q6P158 1386 aaKnown RBP11.96□□□□□ -0.49
MSI2-218ENST00000583821 ATAD2Q6PL18 1390 aa11.96□□□□□ -0.49
MSI2-218ENST00000583821 SPATA31A3Q5VYP0 1347 aa11.96□□□□□ -0.49
MSI2-218ENST00000583821 PRAM1Q96QH2 718 aa11.96□□□□□ -0.49
MSI2-218ENST00000583821 SLIT2O94813 1529 aa11.96□□□□□ -0.5
MSI2-218ENST00000583821 MIER1Q8N108 512 aa11.95□□□□□ -0.5
MSI2-218ENST00000583821 RALGAPBQ86X10 1494 aa11.95□□□□□ -0.5
MSI2-218ENST00000583821 ITSN1Q15811 1721 aa11.94□□□□□ -0.5
MSI2-218ENST00000583821 KRT28Q7Z3Y7 464 aa11.94□□□□□ -0.5
MSI2-218ENST00000583821 CABLES1Q8TDN4 633 aa11.94□□□□□ -0.5
MSI2-218ENST00000583821 PHF8Q9UPP1 1060 aa11.94□□□□□ -0.5
MSI2-218ENST00000583821 SIRT1Q96EB6 747 aa11.93□□□□□ -0.5
MSI2-218ENST00000583821 ANKARQ7Z5J8 1434 aa11.93□□□□□ -0.5
MSI2-218ENST00000583821 TULP4Q9NRJ4 1543 aa11.92□□□□□ -0.5
MSI2-218ENST00000583821 TOPAZ1Q8N9V7 1692 aa11.92□□□□□ -0.5
MSI2-218ENST00000583821 HIRIP3Q9BW71 556 aaPredicted RBP11.92□□□□□ -0.5
MSI2-218ENST00000583821 POGKQ9P215 609 aa11.92□□□□□ -0.5
MSI2-218ENST00000583821 FBXO3Q9UK99 471 aa11.92□□□□□ -0.5
MSI2-218ENST00000583821 MINK1Q8N4C8 1332 aaPredicted RBP11.91□□□□□ -0.5
MSI2-218ENST00000583821 PMFBP1Q8TBY8 1022 aa11.91□□□□□ -0.5
MSI2-218ENST00000583821 TRAK1Q9UPV9 953 aa11.91□□□□□ -0.5
MSI2-218ENST00000583821 KDM2AQ9Y2K7 1162 aa11.91□□□□□ -0.5
MSI2-218ENST00000583821 PRR36Q9H6K5 1346 aa11.9□□□□□ -0.5
MSI2-218ENST00000583821 PHRF1Q9P1Y6 1649 aaKnown RBP11.9□□□□□ -0.5
MSI2-218ENST00000583821 MNX1P50219 401 aaPredicted RBP11.9□□□□□ -0.5
MSI2-218ENST00000583821 LMOD2Q6P5Q4 547 aa11.9□□□□□ -0.5
MSI2-218ENST00000583821 GJD4Q96KN9 370 aaPredicted RBP11.9□□□□□ -0.5
MSI2-218ENST00000583821 SBNO1A3KN83 1393 aa11.9□□□□□ -0.5
MSI2-218ENST00000583821 COL14A1Q05707 1796 aaKnown RBP11.9□□□□□ -0.51
MSI2-218ENST00000583821 ACIN1Q9UKV3 1341 aaKnown RBP11.89□□□□□ -0.51
MSI2-218ENST00000583821 VASPP50552 380 aaPredicted RBP11.89□□□□□ -0.51
MSI2-218ENST00000583821 HAP1P54257 671 aaPredicted RBP11.89□□□□□ -0.51
MSI2-218ENST00000583821 UNC5CLQ8IV45 518 aa11.89□□□□□ -0.51
MSI2-218ENST00000583821 PLCD3Q8N3E9 789 aa11.89□□□□□ -0.51
MSI2-218ENST00000583821 DCAF11Q8TEB1 546 aa11.89□□□□□ -0.51
MSI2-218ENST00000583821 FARP1Q9Y4F1 1045 aaPredicted RBP11.89□□□□□ -0.51
MSI2-218ENST00000583821 KIAA1210Q9ULL0 1709 aa11.89□□□□□ -0.51
MSI2-218ENST00000583821 ARHGEF10O15013 1369 aa11.88□□□□□ -0.51
MSI2-218ENST00000583821 ATP7BP35670 1465 aa11.88□□□□□ -0.51
MSI2-218ENST00000583821 PSME1Q06323 249 aa11.87□□□□□ -0.51
MSI2-218ENST00000583821 QRICH2Q9H0J4 1663 aa11.85□□□□□ -0.51
MSI2-218ENST00000583821 EIF3AQ14152 1382 aaKnown RBP11.84□□□□□ -0.51
MSI2-218ENST00000583821 FAM83GA6ND36 823 aa11.84□□□□□ -0.51
MSI2-218ENST00000583821 WASLO00401 505 aaPredicted RBP11.84□□□□□ -0.51
MSI2-218ENST00000583821 EVX2Q03828 476 aa11.84□□□□□ -0.51
MSI2-218ENST00000583821 VPS72Q15906 364 aa11.84□□□□□ -0.51
MSI2-218ENST00000583821 CCDC9Q9Y3X0 531 aaKnown RBP11.84□□□□□ -0.51
MSI2-218ENST00000583821 THSD7AQ9UPZ6 1657 aa11.84□□□□□ -0.51
MSI2-218ENST00000583821 TNS1Q9HBL0 1735 aaKnown RBP11.83□□□□□ -0.52
MSI2-218ENST00000583821 GPRASP1Q5JY77 1395 aa11.83□□□□□ -0.52
MSI2-218ENST00000583821 SEPT12Q8IYM1 358 aa11.83□□□□□ -0.52
MSI2-218ENST00000583821 BLMP54132 1417 aaPredicted RBP11.83□□□□□ -0.52
MSI2-218ENST00000583821 NRKQ7Z2Y5 1582 aa11.83□□□□□ -0.52
MSI2-218ENST00000583821 RGPD1P0DJD0 1748 aa11.83□□□□□ -0.52
MSI2-218ENST00000583821 NGDNQ8NEJ9 315 aaKnown RBP11.81□□□□□ -0.52
MSI2-218ENST00000583821 HAX1O00165 279 aa11.8□□□□□ -0.52
MSI2-218ENST00000583821 PAK3O75914 559 aaPredicted RBP11.8□□□□□ -0.52
MSI2-218ENST00000583821 FAM98CQ17RN3 349 aaKnown RBP11.8□□□□□ -0.52
MSI2-218ENST00000583821 DEFB132Q7Z7B7 95 aa11.8□□□□□ -0.52
MSI2-218ENST00000583821 BTG4Q9NY30 223 aa11.8□□□□□ -0.52
MSI2-218ENST00000583821 A0A0G2JS52 829 aa11.79□□□□□ -0.52
MSI2-218ENST00000583821 MYT1Q01538 1121 aa11.79□□□□□ -0.52
MSI2-218ENST00000583821 IFNLR1Q8IU57 520 aaPredicted RBP11.79□□□□□ -0.52
MSI2-218ENST00000583821 NUDT16Q96DE0 195 aaKnown RBP11.79□□□□□ -0.52
MSI2-218ENST00000583821 ZRANB1Q9UGI0 708 aa11.79□□□□□ -0.52
MSI2-218ENST00000583821 TRPM1Q7Z4N2 1603 aa11.78□□□□□ -0.52
MSI2-218ENST00000583821 LMO7Q8WWI1 1683 aa11.78□□□□□ -0.52
MSI2-218ENST00000583821 HRCP23327 699 aa11.78□□□□□ -0.52
MSI2-218ENST00000583821 NBPF1Q3BBV0 1214 aa11.78□□□□□ -0.52
MSI2-218ENST00000583821 NUTM2GQ5VZR2 741 aa11.78□□□□□ -0.52
MSI2-218ENST00000583821 KRT27Q7Z3Y8 459 aa11.78□□□□□ -0.52
MSI2-218ENST00000583821 CCDC125Q86Z20 511 aa11.78□□□□□ -0.52
MSI2-218ENST00000583821 KIAA0232Q92628 1395 aa11.78□□□□□ -0.52
MSI2-218ENST00000583821 ONECUT3O60422 494 aaPredicted RBP11.77□□□□□ -0.53
MSI2-218ENST00000583821 CHRNA2Q15822 529 aa11.77□□□□□ -0.53
MSI2-218ENST00000583821 FAM182BQ5T319 152 aa11.77□□□□□ -0.53
MSI2-218ENST00000583821 CDK19Q9BWU1 502 aa11.77□□□□□ -0.53
MSI2-218ENST00000583821 SPATA31A5Q5VU36 1347 aa11.76□□□□□ -0.53
MSI2-218ENST00000583821 SPATA31A7Q8IWB4 1347 aa11.76□□□□□ -0.53
MSI2-218ENST00000583821 POLR3AO14802 1390 aaPredicted RBP11.76□□□□□ -0.53
MSI2-218ENST00000583821 LRP5O75197 1615 aa11.75□□□□□ -0.53
MSI2-218ENST00000583821 PIK3C2AO00443 1686 aa11.75□□□□□ -0.53
MSI2-218ENST00000583821 WNK3Q9BYP7 1800 aa11.75□□□□□ -0.53
MSI2-218ENST00000583821 STAC3Q96MF2 364 aa11.75□□□□□ -0.53
MSI2-218ENST00000583821 PRDM11Q9NQV5 511 aa11.75□□□□□ -0.53
MSI2-218ENST00000583821 ACEP12821 1306 aa11.75□□□□□ -0.53
MSI2-218ENST00000583821 AKAP12Q02952 1782 aa11.74□□□□□ -0.53
MSI2-218ENST00000583821 ZC3H6P61129 1189 aaKnown RBP11.74□□□□□ -0.53
MSI2-218ENST00000583821 PPIP5K1Q6PFW1 1433 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms