RNA–Protein interactions for RNA: ENST00000583805.1

CRLF3-205, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-205ENST00000583805 EIF3AQ14152 1382 aaKnown RBP12.75□□□□□ -0.37
CRLF3-205ENST00000583805 BRWD3Q6RI45 1802 aa12.75□□□□□ -0.37
CRLF3-205ENST00000583805 ALS2Q96Q42 1657 aa12.75□□□□□ -0.37
CRLF3-205ENST00000583805 QTRT2Q9H974 415 aaKnown RBP12.75□□□□□ -0.37
CRLF3-205ENST00000583805 TNS3Q68CZ2 1445 aa12.74□□□□□ -0.37
CRLF3-205ENST00000583805 FNBP4Q8N3X1 1017 aaPredicted RBP12.74□□□□□ -0.37
CRLF3-205ENST00000583805 UPF1Q92900 1129 aaKnown RBP eCLIP12.74□□□□□ -0.37
CRLF3-205ENST00000583805 TRPC5Q9UL62 973 aaPredicted RBP12.74□□□□□ -0.37
CRLF3-205ENST00000583805 CRYBG1Q9Y4K1 1723 aa12.74□□□□□ -0.37
CRLF3-205ENST00000583805 FOXO3O43524 673 aa12.73□□□□□ -0.37
CRLF3-205ENST00000583805 USP21Q9UK80 565 aa12.73□□□□□ -0.37
CRLF3-205ENST00000583805 TULP4Q9NRJ4 1543 aa12.72□□□□□ -0.37
CRLF3-205ENST00000583805 SPDYE2BA6NHP3 402 aa12.72□□□□□ -0.37
CRLF3-205ENST00000583805 SPDYE6P0CI01 402 aa12.72□□□□□ -0.37
CRLF3-205ENST00000583805 SPDYE2Q495Y8 402 aa12.72□□□□□ -0.37
CRLF3-205ENST00000583805 CFAP70Q5T0N1 1121 aa12.72□□□□□ -0.37
CRLF3-205ENST00000583805 ZBTB47Q9UFB7 747 aaPredicted RBP12.72□□□□□ -0.37
CRLF3-205ENST00000583805 KDM2AQ9Y2K7 1162 aa12.72□□□□□ -0.37
CRLF3-205ENST00000583805 EP400Q96L91 3159 aa12.72□□□□□ -0.37
CRLF3-205ENST00000583805 NRAPQ86VF7 1730 aa12.71□□□□□ -0.37
CRLF3-205ENST00000583805 ATAD2Q6PL18 1390 aa12.71□□□□□ -0.37
CRLF3-205ENST00000583805 TOPAZ1Q8N9V7 1692 aa12.71□□□□□ -0.37
CRLF3-205ENST00000583805 SPATA31A3Q5VYP0 1347 aa12.71□□□□□ -0.37
CRLF3-205ENST00000583805 BCL9LQ86UU0 1499 aa12.71□□□□□ -0.38
CRLF3-205ENST00000583805 SBNO1A3KN83 1393 aa12.7□□□□□ -0.38
CRLF3-205ENST00000583805 NUTM2FA1L443 756 aa12.7□□□□□ -0.38
CRLF3-205ENST00000583805 PSME1Q06323 249 aa12.7□□□□□ -0.38
CRLF3-205ENST00000583805 PRAM1Q96QH2 718 aa12.7□□□□□ -0.38
CRLF3-205ENST00000583805 SLIT2O94813 1529 aa12.7□□□□□ -0.38
CRLF3-205ENST00000583805 COL14A1Q05707 1796 aaKnown RBP12.7□□□□□ -0.38
CRLF3-205ENST00000583805 ARHGEF10O15013 1369 aa12.69□□□□□ -0.38
CRLF3-205ENST00000583805 GLI3P10071 1580 aa12.69□□□□□ -0.38
CRLF3-205ENST00000583805 POGKQ9P215 609 aa12.69□□□□□ -0.38
CRLF3-205ENST00000583805 PHF8Q9UPP1 1060 aa12.69□□□□□ -0.38
CRLF3-205ENST00000583805 XPCQ01831 940 aaPredicted RBP12.68□□□□□ -0.38
CRLF3-205ENST00000583805 TPRNQ4KMQ1 711 aa12.68□□□□□ -0.38
CRLF3-205ENST00000583805 PHRF1Q9P1Y6 1649 aaKnown RBP12.67□□□□□ -0.38
CRLF3-205ENST00000583805 RGL2O15211 777 aa12.67□□□□□ -0.38
CRLF3-205ENST00000583805 KRT28Q7Z3Y7 464 aa12.67□□□□□ -0.38
CRLF3-205ENST00000583805 DCAF11Q8TEB1 546 aa12.66□□□□□ -0.38
CRLF3-205ENST00000583805 QRICH2Q9H0J4 1663 aa12.65□□□□□ -0.38
CRLF3-205ENST00000583805 CIZ1Q9ULV3 898 aaPredicted RBP12.65□□□□□ -0.38
CRLF3-205ENST00000583805 RALGAPBQ86X10 1494 aa12.65□□□□□ -0.38
CRLF3-205ENST00000583805 SAFB2Q14151 953 aaKnown RBP eCLIP12.64□□□□□ -0.39
CRLF3-205ENST00000583805 UNC5CLQ8IV45 518 aa12.64□□□□□ -0.39
CRLF3-205ENST00000583805 GJD4Q96KN9 370 aaPredicted RBP12.64□□□□□ -0.39
CRLF3-205ENST00000583805 GPRASP1Q5JY77 1395 aa12.64□□□□□ -0.39
CRLF3-205ENST00000583805 ATP7BP35670 1465 aa12.64□□□□□ -0.39
CRLF3-205ENST00000583805 TRAK1Q9UPV9 953 aa12.63□□□□□ -0.39
CRLF3-205ENST00000583805 SSUH2Q9Y2M2 353 aa12.63□□□□□ -0.39
CRLF3-205ENST00000583805 RGPD1P0DJD0 1748 aa12.62□□□□□ -0.39
CRLF3-205ENST00000583805 CCDC125Q86Z20 511 aa12.62□□□□□ -0.39
CRLF3-205ENST00000583805 WASLO00401 505 aaPredicted RBP12.61□□□□□ -0.39
CRLF3-205ENST00000583805 TRPM1Q7Z4N2 1603 aa12.61□□□□□ -0.39
CRLF3-205ENST00000583805 MINK1Q8N4C8 1332 aaPredicted RBP12.61□□□□□ -0.39
CRLF3-205ENST00000583805 VPS72Q15906 364 aa12.59□□□□□ -0.39
CRLF3-205ENST00000583805 PMFBP1Q8TBY8 1022 aa12.59□□□□□ -0.39
CRLF3-205ENST00000583805 HIRIP3Q9BW71 556 aaPredicted RBP12.59□□□□□ -0.39
CRLF3-205ENST00000583805 PRR36Q9H6K5 1346 aa12.59□□□□□ -0.39
CRLF3-205ENST00000583805 THSD7AQ9UPZ6 1657 aa12.58□□□□□ -0.4
CRLF3-205ENST00000583805 LMOD2Q6P5Q4 547 aa12.58□□□□□ -0.4
CRLF3-205ENST00000583805 TSHZ2Q9NRE2 1034 aa12.58□□□□□ -0.4
CRLF3-205ENST00000583805 NRKQ7Z2Y5 1582 aa12.57□□□□□ -0.4
CRLF3-205ENST00000583805 BLMP54132 1417 aaPredicted RBP12.57□□□□□ -0.4
CRLF3-205ENST00000583805 AKAP12Q02952 1782 aa12.57□□□□□ -0.4
CRLF3-205ENST00000583805 NGDNQ8NEJ9 315 aaKnown RBP12.56□□□□□ -0.4
CRLF3-205ENST00000583805 TNS1Q9HBL0 1735 aaKnown RBP12.56□□□□□ -0.4
CRLF3-205ENST00000583805 POLR3AO14802 1390 aaPredicted RBP12.56□□□□□ -0.4
CRLF3-205ENST00000583805 CABLES1Q8TDN4 633 aa12.55□□□□□ -0.4
CRLF3-205ENST00000583805 WNK3Q9BYP7 1800 aa12.54□□□□□ -0.4
CRLF3-205ENST00000583805 ONECUT3O60422 494 aaPredicted RBP12.54□□□□□ -0.4
CRLF3-205ENST00000583805 NUDT16Q96DE0 195 aaKnown RBP12.54□□□□□ -0.4
CRLF3-205ENST00000583805 LMO7Q8WWI1 1683 aa12.54□□□□□ -0.4
CRLF3-205ENST00000583805 NBR1Q14596 966 aa12.53□□□□□ -0.4
CRLF3-205ENST00000583805 CCDC9Q9Y3X0 531 aaKnown RBP12.53□□□□□ -0.4
CRLF3-205ENST00000583805 BRD4O60885 1362 aaPredicted RBP12.53□□□□□ -0.4
CRLF3-205ENST00000583805 PARP4Q9UKK3 1724 aaKnown RBP12.52□□□□□ -0.41
CRLF3-205ENST00000583805 FAM83GA6ND36 823 aa12.52□□□□□ -0.41
CRLF3-205ENST00000583805 PAK3O75914 559 aaPredicted RBP12.52□□□□□ -0.41
CRLF3-205ENST00000583805 SEPT12Q8IYM1 358 aa12.52□□□□□ -0.41
CRLF3-205ENST00000583805 CCDC61Q9Y6R9 512 aa12.52□□□□□ -0.41
CRLF3-205ENST00000583805 DSG3P32926 999 aa12.51□□□□□ -0.41
CRLF3-205ENST00000583805 SF3B2Q13435 895 aaKnown RBP12.51□□□□□ -0.41
CRLF3-205ENST00000583805 CDK19Q9BWU1 502 aa12.51□□□□□ -0.41
CRLF3-205ENST00000583805 BTG4Q9NY30 223 aa12.51□□□□□ -0.41
CRLF3-205ENST00000583805 ZRANB1Q9UGI0 708 aa12.51□□□□□ -0.41
CRLF3-205ENST00000583805 LRP5O75197 1615 aa12.51□□□□□ -0.41
CRLF3-205ENST00000583805 MON2Q7Z3U7 1717 aa12.51□□□□□ -0.41
CRLF3-205ENST00000583805 KRT27Q7Z3Y8 459 aa12.5□□□□□ -0.41
CRLF3-205ENST00000583805 CENPJQ9HC77 1338 aaPredicted RBP12.5□□□□□ -0.41
CRLF3-205ENST00000583805 PPIP5K1Q6PFW1 1433 aa12.5□□□□□ -0.41
CRLF3-205ENST00000583805 RGPD5Q99666 1765 aa12.49□□□□□ -0.41
CRLF3-205ENST00000583805 PIK3C2AO00443 1686 aa12.49□□□□□ -0.41
CRLF3-205ENST00000583805 ACEP12821 1306 aa12.49□□□□□ -0.41
CRLF3-205ENST00000583805 PLEKHG3A1L390 1219 aa12.49□□□□□ -0.41
CRLF3-205ENST00000583805 PRDM11Q9NQV5 511 aa12.49□□□□□ -0.41
CRLF3-205ENST00000583805 SBF2Q86WG5 1849 aa12.48□□□□□ -0.41
CRLF3-205ENST00000583805 USP54Q70EL1 1684 aa12.48□□□□□ -0.41
CRLF3-205ENST00000583805 KIAA0232Q92628 1395 aa12.48□□□□□ -0.41
CRLF3-205ENST00000583805 SPATA31A5Q5VU36 1347 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms