RNA–Protein interactions for RNA: ENST00000583361.1

PRKCA-204, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-204ENST00000583361 CDK12Q9NYV4 1490 aaPredicted RBP11.25□□□□□ -0.61
PRKCA-204ENST00000583361 PHRF1Q9P1Y6 1649 aaKnown RBP11.25□□□□□ -0.61
PRKCA-204ENST00000583361 NUTM2GQ5VZR2 741 aa11.25□□□□□ -0.61
PRKCA-204ENST00000583361 CARD11Q9BXL7 1154 aa11.25□□□□□ -0.61
PRKCA-204ENST00000583361 CRYBG1Q9Y4K1 1723 aa11.25□□□□□ -0.61
PRKCA-204ENST00000583361 ACEP12821 1306 aa11.25□□□□□ -0.61
PRKCA-204ENST00000583361 EVC2Q86UK5 1308 aa11.25□□□□□ -0.61
PRKCA-204ENST00000583361 COL14A1Q05707 1796 aaKnown RBP11.24□□□□□ -0.61
PRKCA-204ENST00000583361 ATRNO75882 1429 aa11.24□□□□□ -0.61
PRKCA-204ENST00000583361 BRWD3Q6RI45 1802 aa11.23□□□□□ -0.61
PRKCA-204ENST00000583361 A0A0G2JS52 829 aa11.23□□□□□ -0.61
PRKCA-204ENST00000583361 MYT1Q01538 1121 aa11.23□□□□□ -0.61
PRKCA-204ENST00000583361 UNC5CLQ8IV45 518 aa11.23□□□□□ -0.61
PRKCA-204ENST00000583361 BCL9LQ86UU0 1499 aa11.23□□□□□ -0.61
PRKCA-204ENST00000583361 AKAP12Q02952 1782 aa11.23□□□□□ -0.61
PRKCA-204ENST00000583361 SLIT2O94813 1529 aa11.22□□□□□ -0.61
PRKCA-204ENST00000583361 NRAPQ86VF7 1730 aa11.22□□□□□ -0.61
PRKCA-204ENST00000583361 RALGAPBQ86X10 1494 aa11.22□□□□□ -0.61
PRKCA-204ENST00000583361 ABTB2Q8N961 1025 aa11.22□□□□□ -0.61
PRKCA-204ENST00000583361 GJD4Q96KN9 370 aaPredicted RBP11.22□□□□□ -0.61
PRKCA-204ENST00000583361 POLR3AO14802 1390 aaPredicted RBP11.21□□□□□ -0.61
PRKCA-204ENST00000583361 PLEKHG3A1L390 1219 aa11.21□□□□□ -0.61
PRKCA-204ENST00000583361 PRDM11Q9NQV5 511 aa11.21□□□□□ -0.61
PRKCA-204ENST00000583361 CABP1Q9NZU7 370 aa11.21□□□□□ -0.61
PRKCA-204ENST00000583361 GLI3P10071 1580 aa11.2□□□□□ -0.62
PRKCA-204ENST00000583361 ZBTB7CA1YPR0 619 aa11.2□□□□□ -0.62
PRKCA-204ENST00000583361 FAM83GA6ND36 823 aa11.2□□□□□ -0.62
PRKCA-204ENST00000583361 ZC3H6P61129 1189 aaKnown RBP11.2□□□□□ -0.62
PRKCA-204ENST00000583361 UPF1Q92900 1129 aaKnown RBP eCLIP11.2□□□□□ -0.62
PRKCA-204ENST00000583361 BTG4Q9NY30 223 aa11.2□□□□□ -0.62
PRKCA-204ENST00000583361 ATAD2Q6PL18 1390 aa11.19□□□□□ -0.62
PRKCA-204ENST00000583361 CHRNA2Q15822 529 aa11.18□□□□□ -0.62
PRKCA-204ENST00000583361 NLRP13Q86W25 1043 aa11.18□□□□□ -0.62
PRKCA-204ENST00000583361 TMC1Q8TDI8 760 aa11.18□□□□□ -0.62
PRKCA-204ENST00000583361 STRN4Q9NRL3 753 aa11.18□□□□□ -0.62
PRKCA-204ENST00000583361 NRKQ7Z2Y5 1582 aa11.18□□□□□ -0.62
PRKCA-204ENST00000583361 USP6P35125 1406 aa11.18□□□□□ -0.62
PRKCA-204ENST00000583361 KIAA0232Q92628 1395 aa11.17□□□□□ -0.62
PRKCA-204ENST00000583361 NLRP6P59044 892 aa11.17□□□□□ -0.62
PRKCA-204ENST00000583361 VPS72Q15906 364 aa11.17□□□□□ -0.62
PRKCA-204ENST00000583361 MON2Q7Z3U7 1717 aa11.17□□□□□ -0.62
PRKCA-204ENST00000583361 PIK3C2AO00443 1686 aa11.17□□□□□ -0.62
PRKCA-204ENST00000583361 EVA1CP58658 441 aa11.16□□□□□ -0.62
PRKCA-204ENST00000583361 RGPD5Q99666 1765 aa11.16□□□□□ -0.62
PRKCA-204ENST00000583361 KTN1Q86UP2 1357 aaKnown RBP11.16□□□□□ -0.62
PRKCA-204ENST00000583361 SOX12O15370 315 aa11.15□□□□□ -0.62
PRKCA-204ENST00000583361 FAM98CQ17RN3 349 aaKnown RBP11.15□□□□□ -0.62
PRKCA-204ENST00000583361 CCER1Q8TC90 406 aaPredicted RBP11.15□□□□□ -0.62
PRKCA-204ENST00000583361 BRD4O60885 1362 aaPredicted RBP11.15□□□□□ -0.63
PRKCA-204ENST00000583361 SBNO2Q9Y2G9 1366 aa11.15□□□□□ -0.63
PRKCA-204ENST00000583361 SEPT12Q8IYM1 358 aa11.14□□□□□ -0.63
PRKCA-204ENST00000583361 ZNF692Q9BU19 519 aaPredicted RBP11.14□□□□□ -0.63
PRKCA-204ENST00000583361 USP35Q9P2H5 1018 aa11.14□□□□□ -0.63
PRKCA-204ENST00000583361 ST20-MTHFSA0A0A6YYL1 179 aa11.13□□□□□ -0.63
PRKCA-204ENST00000583361 GCP02774 474 aa11.13□□□□□ -0.63
PRKCA-204ENST00000583361 HDGFL2Q7Z4V5 671 aaPredicted RBP11.13□□□□□ -0.63
PRKCA-204ENST00000583361 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.12□□□□□ -0.63
PRKCA-204ENST00000583361 LTN1O94822 1766 aa11.12□□□□□ -0.63
PRKCA-204ENST00000583361 USP19O94966 1318 aa11.11□□□□□ -0.63
PRKCA-204ENST00000583361 TTC21BQ7Z4L5 1316 aa11.11□□□□□ -0.63
PRKCA-204ENST00000583361 SF3B2Q13435 895 aaKnown RBP11.11□□□□□ -0.63
PRKCA-204ENST00000583361 KRT27Q7Z3Y8 459 aa11.11□□□□□ -0.63
PRKCA-204ENST00000583361 LMO7Q8WWI1 1683 aa11.11□□□□□ -0.63
PRKCA-204ENST00000583361 SPATA31A5Q5VU36 1347 aa11.1□□□□□ -0.63
PRKCA-204ENST00000583361 SPATA31A7Q8IWB4 1347 aa11.1□□□□□ -0.63
PRKCA-204ENST00000583361 TTC21AQ8NDW8 1320 aa11.1□□□□□ -0.63
PRKCA-204ENST00000583361 CLSPNQ9HAW4 1339 aa11.1□□□□□ -0.63
PRKCA-204ENST00000583361 SLIT3O75094 1523 aa11.1□□□□□ -0.63
PRKCA-204ENST00000583361 TERF2IPQ9NYB0 399 aa11.1□□□□□ -0.63
PRKCA-204ENST00000583361 USP47Q96K76 1375 aa11.1□□□□□ -0.63
PRKCA-204ENST00000583361 CAMTA1Q9Y6Y1 1673 aa11.1□□□□□ -0.63
PRKCA-204ENST00000583361 EP400Q96L91 3159 aa11.1□□□□□ -0.63
PRKCA-204ENST00000583361 SSH2Q76I76 1423 aa11.09□□□□□ -0.63
PRKCA-204ENST00000583361 CPDO75976 1380 aa11.09□□□□□ -0.63
PRKCA-204ENST00000583361 SLC24A1O60721 1099 aa11.09□□□□□ -0.63
PRKCA-204ENST00000583361 TMF1P82094 1093 aa11.09□□□□□ -0.63
PRKCA-204ENST00000583361 KCNH5Q8NCM2 988 aa11.09□□□□□ -0.63
PRKCA-204ENST00000583361 SLC12A5Q9H2X9 1139 aa11.09□□□□□ -0.63
PRKCA-204ENST00000583361 CPSF1Q10570 1443 aaKnown RBP11.09□□□□□ -0.63
PRKCA-204ENST00000583361 KAT6BQ8WYB5 2073 aa11.08□□□□□ -0.63
PRKCA-204ENST00000583361 THSD7AQ9UPZ6 1657 aa11.08□□□□□ -0.64
PRKCA-204ENST00000583361 LARP1Q6PKG0 1096 aaKnown RBP11.08□□□□□ -0.64
PRKCA-204ENST00000583361 TIMELESSQ9UNS1 1208 aa11.08□□□□□ -0.64
PRKCA-204ENST00000583361 RGPD1P0DJD0 1748 aa11.08□□□□□ -0.64
PRKCA-204ENST00000583361 COL18A1P39060 1754 aa11.08□□□□□ -0.64
PRKCA-204ENST00000583361 SPATA31A1Q5TZJ5 1347 aa11.08□□□□□ -0.64
PRKCA-204ENST00000583361 WNK3Q9BYP7 1800 aa11.07□□□□□ -0.64
PRKCA-204ENST00000583361 A0A1W2PP64 1363 aa11.07□□□□□ -0.64
PRKCA-204ENST00000583361 CSB-PGBD3P0DP91 1061 aa11.07□□□□□ -0.64
PRKCA-204ENST00000583361 FAM182BQ5T319 152 aa11.07□□□□□ -0.64
PRKCA-204ENST00000583361 CCDC125Q86Z20 511 aa11.07□□□□□ -0.64
PRKCA-204ENST00000583361 KIF20BQ96Q89 1820 aa11.07□□□□□ -0.64
PRKCA-204ENST00000583361 COL5A2P05997 1499 aaPredicted RBP11.06□□□□□ -0.64
PRKCA-204ENST00000583361 CD163L1Q9NR16 1453 aa11.06□□□□□ -0.64
PRKCA-204ENST00000583361 USP54Q70EL1 1684 aa11.06□□□□□ -0.64
PRKCA-204ENST00000583361 ONECUT3O60422 494 aaPredicted RBP11.06□□□□□ -0.64
PRKCA-204ENST00000583361 TOM1L2Q6ZVM7 507 aa11.06□□□□□ -0.64
PRKCA-204ENST00000583361 NME9Q86XW9 330 aa11.06□□□□□ -0.64
PRKCA-204ENST00000583361 TESK2Q96S53 571 aa11.06□□□□□ -0.64
PRKCA-204ENST00000583361 POLR3GLQ9BT43 218 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms