RNA–Protein interactions for RNA: ENST00000583066.5

NDEL1-216, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-216ENST00000583066 PTPN23Q9H3S7 1636 aa9.58□□□□□ -0.88
NDEL1-216ENST00000583066 KANK4Q5T7N3 995 aaPredicted RBP9.58□□□□□ -0.88
NDEL1-216ENST00000583066 UNC5CLQ8IV45 518 aa9.58□□□□□ -0.88
NDEL1-216ENST00000583066 SLC52A1Q9NWF4 448 aa9.58□□□□□ -0.88
NDEL1-216ENST00000583066 NUP188Q5SRE5 1749 aa9.58□□□□□ -0.88
NDEL1-216ENST00000583066 UTRNP46939 3433 aa9.57□□□□□ -0.88
NDEL1-216ENST00000583066 CHD4Q14839 1912 aa9.57□□□□□ -0.88
NDEL1-216ENST00000583066 MAP3K13O43283 966 aa9.57□□□□□ -0.88
NDEL1-216ENST00000583066 PYGBP11216 843 aa9.57□□□□□ -0.88
NDEL1-216ENST00000583066 EZH2Q15910 746 aaKnown RBP9.57□□□□□ -0.88
NDEL1-216ENST00000583066 DIEXFQ68CQ4 756 aaKnown RBP9.57□□□□□ -0.88
NDEL1-216ENST00000583066 KANK1Q14678 1352 aa9.57□□□□□ -0.88
NDEL1-216ENST00000583066 NINLQ9Y2I6 1382 aa9.57□□□□□ -0.88
NDEL1-216ENST00000583066 PXDNQ92626 1479 aa9.57□□□□□ -0.88
NDEL1-216ENST00000583066 RREB1Q92766 1687 aa9.57□□□□□ -0.88
NDEL1-216ENST00000583066 DISP2A7MBM2 1401 aa9.56□□□□□ -0.88
NDEL1-216ENST00000583066 USP32Q8NFA0 1604 aa9.56□□□□□ -0.88
NDEL1-216ENST00000583066 GALR2O43603 387 aaPredicted RBP9.56□□□□□ -0.88
NDEL1-216ENST00000583066 FAM182BQ5T319 152 aa9.56□□□□□ -0.88
NDEL1-216ENST00000583066 POTEGQ6S5H5 508 aa9.56□□□□□ -0.88
NDEL1-216ENST00000583066 METP08581 1390 aa9.55□□□□□ -0.88
NDEL1-216ENST00000583066 CHRM1P11229 460 aaPredicted RBP9.55□□□□□ -0.88
NDEL1-216ENST00000583066 RRP7BPQ9NSQ0 103 aa9.55□□□□□ -0.88
NDEL1-216ENST00000583066 XPCQ01831 940 aaPredicted RBP9.54□□□□□ -0.88
NDEL1-216ENST00000583066 MS4A3Q96HJ5 214 aa9.54□□□□□ -0.88
NDEL1-216ENST00000583066 NWD2Q9ULI1 1742 aa9.53□□□□□ -0.88
NDEL1-216ENST00000583066 ONECUT3O60422 494 aaPredicted RBP9.53□□□□□ -0.88
NDEL1-216ENST00000583066 CHGAP10645 457 aaKnown RBP9.53□□□□□ -0.88
NDEL1-216ENST00000583066 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.53□□□□□ -0.88
NDEL1-216ENST00000583066 PPP1R1BQ9UD71 204 aaPredicted RBP9.53□□□□□ -0.88
NDEL1-216ENST00000583066 NRKQ7Z2Y5 1582 aa9.53□□□□□ -0.88
NDEL1-216ENST00000583066 RPRD2Q5VT52 1461 aaKnown RBP9.53□□□□□ -0.88
NDEL1-216ENST00000583066 DHX57Q6P158 1386 aaKnown RBP9.52□□□□□ -0.88
NDEL1-216ENST00000583066 MYOM1P52179 1685 aa9.52□□□□□ -0.89
NDEL1-216ENST00000583066 ADGRB2O60241 1585 aa9.52□□□□□ -0.89
NDEL1-216ENST00000583066 HDGFP51858 240 aaKnown RBP9.52□□□□□ -0.89
NDEL1-216ENST00000583066 NRAPQ86VF7 1730 aa9.52□□□□□ -0.89
NDEL1-216ENST00000583066 ABCA3Q99758 1704 aa9.52□□□□□ -0.89
NDEL1-216ENST00000583066 SGIP1Q9BQI5 828 aa9.52□□□□□ -0.89
NDEL1-216ENST00000583066 CENPBP07199 599 aaPredicted RBP9.51□□□□□ -0.89
NDEL1-216ENST00000583066 VPS72Q15906 364 aa9.51□□□□□ -0.89
NDEL1-216ENST00000583066 CAMKK2Q96RR4 588 aa9.51□□□□□ -0.89
NDEL1-216ENST00000583066 TIMELESSQ9UNS1 1208 aa9.51□□□□□ -0.89
NDEL1-216ENST00000583066 ADGRL2O95490 1459 aa9.51□□□□□ -0.89
NDEL1-216ENST00000583066 ABCC5O15440 1437 aa9.5□□□□□ -0.89
NDEL1-216ENST00000583066 A0A0G2JS52 829 aa9.5□□□□□ -0.89
NDEL1-216ENST00000583066 MYT1Q01538 1121 aa9.5□□□□□ -0.89
NDEL1-216ENST00000583066 CCDC9Q9Y3X0 531 aaKnown RBP9.5□□□□□ -0.89
NDEL1-216ENST00000583066 PCDHB13Q9Y5F0 798 aa9.5□□□□□ -0.89
NDEL1-216ENST00000583066 MYOM3Q5VTT5 1437 aa9.49□□□□□ -0.89
NDEL1-216ENST00000583066 E9PCH4 1651 aa9.49□□□□□ -0.89
NDEL1-216ENST00000583066 THSD7AQ9UPZ6 1657 aa9.49□□□□□ -0.89
NDEL1-216ENST00000583066 FAM98CQ17RN3 349 aaKnown RBP9.49□□□□□ -0.89
NDEL1-216ENST00000583066 IFNL1Q8IU54 200 aa9.49□□□□□ -0.89
NDEL1-216ENST00000583066 SPON1Q9HCB6 807 aa9.49□□□□□ -0.89
NDEL1-216ENST00000583066 CASZ1Q86V15 1759 aa9.49□□□□□ -0.89
NDEL1-216ENST00000583066 ACIN1Q9UKV3 1341 aaKnown RBP9.49□□□□□ -0.89
NDEL1-216ENST00000583066 KCNQ2O43526 872 aa9.48□□□□□ -0.89
NDEL1-216ENST00000583066 OTUD5Q96G74 571 aa9.48□□□□□ -0.89
NDEL1-216ENST00000583066 TRPC6Q9Y210 931 aa9.48□□□□□ -0.89
NDEL1-216ENST00000583066 IQGAP3Q86VI3 1631 aa9.48□□□□□ -0.89
NDEL1-216ENST00000583066 NPHP3Q7Z494 1330 aa9.47□□□□□ -0.89
NDEL1-216ENST00000583066 ROBO2Q9HCK4 1378 aa9.47□□□□□ -0.89
NDEL1-216ENST00000583066 FOXO3O43524 673 aa9.46□□□□□ -0.9
NDEL1-216ENST00000583066 GIGYF1O75420 1035 aaPredicted RBP9.46□□□□□ -0.9
NDEL1-216ENST00000583066 SHANK3Q9BYB0 1731 aa9.45□□□□□ -0.9
NDEL1-216ENST00000583066 TRIM37O94972 964 aa9.45□□□□□ -0.9
NDEL1-216ENST00000583066 CABLES1Q8TDN4 633 aa9.45□□□□□ -0.9
NDEL1-216ENST00000583066 PCDHB8Q9UN66 801 aa9.45□□□□□ -0.9
NDEL1-216ENST00000583066 DAPK1P53355 1430 aa9.45□□□□□ -0.9
NDEL1-216ENST00000583066 SLC24A1O60721 1099 aa9.44□□□□□ -0.9
NDEL1-216ENST00000583066 ECM2O94769 699 aaPredicted RBP9.44□□□□□ -0.9
NDEL1-216ENST00000583066 ESCO1Q5FWF5 840 aa9.44□□□□□ -0.9
NDEL1-216ENST00000583066 RNF25Q96BH1 459 aaPredicted RBP9.44□□□□□ -0.9
NDEL1-216ENST00000583066 PARD3Q8TEW0 1356 aa9.44□□□□□ -0.9
NDEL1-216ENST00000583066 RAB3GAP2Q9H2M9 1393 aa9.44□□□□□ -0.9
NDEL1-216ENST00000583066 CDC42BPGQ6DT37 1551 aa9.44□□□□□ -0.9
NDEL1-216ENST00000583066 SPATA31A3Q5VYP0 1347 aa9.43□□□□□ -0.9
NDEL1-216ENST00000583066 PDGFDQ9GZP0 370 aaPredicted RBP9.43□□□□□ -0.9
NDEL1-216ENST00000583066 APBA3O96018 575 aa9.42□□□□□ -0.9
NDEL1-216ENST00000583066 ZNF467Q7Z7K2 595 aaPredicted RBP9.42□□□□□ -0.9
NDEL1-216ENST00000583066 CHIC2Q9UKJ5 165 aa9.41□□□□□ -0.9
NDEL1-216ENST00000583066 FAM83GA6ND36 823 aa9.4□□□□□ -0.9
NDEL1-216ENST00000583066 PTGER2P43116 358 aa9.4□□□□□ -0.9
NDEL1-216ENST00000583066 NEXMIFQ5QGS0 1516 aa9.4□□□□□ -0.91
NDEL1-216ENST00000583066 NUTM2FA1L443 756 aa9.39□□□□□ -0.91
NDEL1-216ENST00000583066 RGL2O15211 777 aa9.39□□□□□ -0.91
NDEL1-216ENST00000583066 TIE1P35590 1138 aa9.39□□□□□ -0.91
NDEL1-216ENST00000583066 FAM50AQ14320 339 aaKnown RBP9.39□□□□□ -0.91
NDEL1-216ENST00000583066 NBPF8Q3BBV2 869 aa9.39□□□□□ -0.91
NDEL1-216ENST00000583066 NBPF14Q5TI25 921 aa9.39□□□□□ -0.91
NDEL1-216ENST00000583066 FHDC1Q9C0D6 1143 aaPredicted RBP9.39□□□□□ -0.91
NDEL1-216ENST00000583066 BMP2KQ9NSY1 1161 aaPredicted RBP9.39□□□□□ -0.91
NDEL1-216ENST00000583066 TNS3Q68CZ2 1445 aa9.39□□□□□ -0.91
NDEL1-216ENST00000583066 KIF1AQ12756 1690 aa9.39□□□□□ -0.91
NDEL1-216ENST00000583066 ANKRD30AQ9BXX3 1397 aa9.38□□□□□ -0.91
NDEL1-216ENST00000583066 RGPD8O14715 1765 aaPredicted RBP9.38□□□□□ -0.91
NDEL1-216ENST00000583066 COL14A1Q05707 1796 aaKnown RBP9.38□□□□□ -0.91
NDEL1-216ENST00000583066 DLC1Q96QB1 1528 aa9.38□□□□□ -0.91
NDEL1-216ENST00000583066 ATMINO43313 823 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms