RNA–Protein interactions for RNA: ENST00000583066.5

NDEL1-216, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-216ENST00000583066 AEBP2Q6ZN18 517 aaPredicted RBP19.1■□□□□ 0.65
NDEL1-216ENST00000583066 CHIC1Q5VXU3 224 aa18.52■□□□□ 0.56
NDEL1-216ENST00000583066 SENP3Q9H4L4 574 aaPredicted RBP16.37■□□□□ 0.21
NDEL1-216ENST00000583066 PHF23Q9BUL5 403 aaPredicted RBP16.32■□□□□ 0.2
NDEL1-216ENST00000583066 NISCHQ9Y2I1 1504 aa15.78■□□□□ 0.12
NDEL1-216ENST00000583066 POTEDQ86YR6 584 aa15.26■□□□□ 0.03
NDEL1-216ENST00000583066 ABCC9O60706 1549 aa15.22■□□□□ 0.03
NDEL1-216ENST00000583066 FOXD1Q16676 465 aa15.15■□□□□ 0.02
NDEL1-216ENST00000583066 PLPPR3Q6T4P5 718 aa14.97□□□□□ -0.01
NDEL1-216ENST00000583066 DNAJC5BQ9UF47 199 aa14.92□□□□□ -0.02
NDEL1-216ENST00000583066 MSH5O43196 834 aa14.66□□□□□ -0.06
NDEL1-216ENST00000583066 CCDC180Q9P1Z9 1646 aa14.49□□□□□ -0.09
NDEL1-216ENST00000583066 PPP6R1Q9UPN7 881 aa14.43□□□□□ -0.1
NDEL1-216ENST00000583066 ADRA2BP18089 450 aa14.38□□□□□ -0.11
NDEL1-216ENST00000583066 PIAS4Q8N2W9 510 aaPredicted RBP14.13□□□□□ -0.15
NDEL1-216ENST00000583066 DNAJC5Q9H3Z4 198 aa14.12□□□□□ -0.15
NDEL1-216ENST00000583066 RB1CC1Q8TDY2 1594 aa14.1□□□□□ -0.15
NDEL1-216ENST00000583066 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.17
NDEL1-216ENST00000583066 UNC13AQ9UPW8 1703 aa13.93□□□□□ -0.18
NDEL1-216ENST00000583066 NACADO15069 1562 aa13.82□□□□□ -0.2
NDEL1-216ENST00000583066 BICRAQ9NZM4 1560 aa13.82□□□□□ -0.2
NDEL1-216ENST00000583066 CECR2Q9BXF3 1484 aa13.74□□□□□ -0.21
NDEL1-216ENST00000583066 CC2D2AQ9P2K1 1620 aa13.71□□□□□ -0.22
NDEL1-216ENST00000583066 DCAF8L2P0C7V8 631 aa13.57□□□□□ -0.24
NDEL1-216ENST00000583066 EIF4G1Q04637 1599 aaKnown RBP13.49□□□□□ -0.25
NDEL1-216ENST00000583066 SHROOM4Q9ULL8 1493 aa13.4□□□□□ -0.26
NDEL1-216ENST00000583066 MYO15BQ96JP2 1530 aa13.36□□□□□ -0.27
NDEL1-216ENST00000583066 CUX2O14529 1486 aa13.33□□□□□ -0.28
NDEL1-216ENST00000583066 TRIM41Q8WV44 630 aa13.24□□□□□ -0.29
NDEL1-216ENST00000583066 SCRIBQ14160 1630 aa13.22□□□□□ -0.29
NDEL1-216ENST00000583066 PPP4R3CPQ6ZMV5 832 aa13.2□□□□□ -0.3
NDEL1-216ENST00000583066 ERCC6Q03468 1493 aa13.12□□□□□ -0.31
NDEL1-216ENST00000583066 MAPK8IP2Q13387 824 aaPredicted RBP13.09□□□□□ -0.31
NDEL1-216ENST00000583066 SCAF1Q9H7N4 1312 aaKnown RBP13.09□□□□□ -0.31
NDEL1-216ENST00000583066 CACNB1Q02641 598 aaPredicted RBP12.96□□□□□ -0.33
NDEL1-216ENST00000583066 ZCCHC6Q5VYS8 1495 aaKnown RBP12.96□□□□□ -0.34
NDEL1-216ENST00000583066 DCAF1Q9Y4B6 1507 aa12.95□□□□□ -0.34
NDEL1-216ENST00000583066 THOC2Q8NI27 1593 aaKnown RBP12.92□□□□□ -0.34
NDEL1-216ENST00000583066 DMRT2Q9Y5R5 561 aa12.9□□□□□ -0.34
NDEL1-216ENST00000583066 NESP48681 1621 aa12.9□□□□□ -0.34
NDEL1-216ENST00000583066 CNKSR2Q8WXI2 1034 aa12.84□□□□□ -0.35
NDEL1-216ENST00000583066 KCNA4P22459 653 aa12.8□□□□□ -0.36
NDEL1-216ENST00000583066 NCBP3Q53F19 620 aaKnown RBP12.77□□□□□ -0.37
NDEL1-216ENST00000583066 SMARCA2P51531 1590 aa12.77□□□□□ -0.37
NDEL1-216ENST00000583066 NCAPD3P42695 1498 aa12.76□□□□□ -0.37
NDEL1-216ENST00000583066 KIF21AQ7Z4S6 1674 aa12.73□□□□□ -0.37
NDEL1-216ENST00000583066 BAZ1AQ9NRL2 1556 aaPredicted RBP12.69□□□□□ -0.38
NDEL1-216ENST00000583066 ATAD2BQ9ULI0 1458 aa12.66□□□□□ -0.38
NDEL1-216ENST00000583066 NPM3O75607 178 aaKnown RBP12.66□□□□□ -0.38
NDEL1-216ENST00000583066 HMGXB3Q12766 1538 aa12.63□□□□□ -0.39
NDEL1-216ENST00000583066 RNF216Q9NWF9 866 aaPredicted RBP12.62□□□□□ -0.39
NDEL1-216ENST00000583066 HOXD11P31277 338 aaPredicted RBP12.61□□□□□ -0.39
NDEL1-216ENST00000583066 LAMC3Q9Y6N6 1575 aa12.6□□□□□ -0.39
NDEL1-216ENST00000583066 RIMBP3CA6NJZ7 1639 aa12.6□□□□□ -0.39
NDEL1-216ENST00000583066 RIMBP3BA6NNM3 1639 aa12.6□□□□□ -0.39
NDEL1-216ENST00000583066 RIMBP3Q9UFD9 1639 aa12.6□□□□□ -0.39
NDEL1-216ENST00000583066 OSCARQ8IYS5 282 aa12.54□□□□□ -0.4
NDEL1-216ENST00000583066 WDR62O43379 1518 aa12.52□□□□□ -0.4
NDEL1-216ENST00000583066 MRC2Q9UBG0 1479 aa12.51□□□□□ -0.41
NDEL1-216ENST00000583066 SMARCA4P51532 1647 aa12.51□□□□□ -0.41
NDEL1-216ENST00000583066 PDS5BQ9NTI5 1447 aa12.5□□□□□ -0.41
NDEL1-216ENST00000583066 BAZ1BQ9UIG0 1483 aaKnown RBP12.49□□□□□ -0.41
NDEL1-216ENST00000583066 ARHGEF11O15085 1522 aa12.46□□□□□ -0.42
NDEL1-216ENST00000583066 DCAF8L1A6NGE4 600 aa12.42□□□□□ -0.42
NDEL1-216ENST00000583066 TRHP20396 242 aaPredicted RBP12.42□□□□□ -0.42
NDEL1-216ENST00000583066 PEG3Q9GZU2 1588 aa12.35□□□□□ -0.43
NDEL1-216ENST00000583066 CYB5RLQ6IPT4 315 aa12.34□□□□□ -0.43
NDEL1-216ENST00000583066 CADPSQ9ULU8 1353 aa12.32□□□□□ -0.44
NDEL1-216ENST00000583066 RNF39Q9H2S5 420 aa12.31□□□□□ -0.44
NDEL1-216ENST00000583066 ARAP1Q96P48 1450 aa12.31□□□□□ -0.44
NDEL1-216ENST00000583066 CEP164Q9UPV0 1460 aa12.3□□□□□ -0.44
NDEL1-216ENST00000583066 URB2Q14146 1524 aaKnown RBP12.23□□□□□ -0.45
NDEL1-216ENST00000583066 FANCD2Q9BXW9 1451 aa12.23□□□□□ -0.45
NDEL1-216ENST00000583066 ILDR1Q86SU0 546 aaPredicted RBP12.23□□□□□ -0.45
NDEL1-216ENST00000583066 C1QBPQ07021 282 aaKnown RBP12.21□□□□□ -0.45
NDEL1-216ENST00000583066 ZNF608Q9ULD9 1512 aaPredicted RBP12.21□□□□□ -0.46
NDEL1-216ENST00000583066 MROH2BQ7Z745 1585 aa12.2□□□□□ -0.46
NDEL1-216ENST00000583066 CHD1O14646 1710 aa12.18□□□□□ -0.46
NDEL1-216ENST00000583066 SLC4A1APQ9BWU0 796 aaKnown RBP12.13□□□□□ -0.47
NDEL1-216ENST00000583066 EIF4G3O43432 1585 aaKnown RBP12.1□□□□□ -0.47
NDEL1-216ENST00000583066 RSF1Q96T23 1441 aaPredicted RBP12.09□□□□□ -0.47
NDEL1-216ENST00000583066 CFTRP13569 1480 aa12.07□□□□□ -0.48
NDEL1-216ENST00000583066 IFT140Q96RY7 1462 aa12.06□□□□□ -0.48
NDEL1-216ENST00000583066 WIZO95785 1651 aa12.05□□□□□ -0.48
NDEL1-216ENST00000583066 SLC4A2P04920 1241 aa11.99□□□□□ -0.49
NDEL1-216ENST00000583066 CLASP1Q7Z460 1538 aa11.98□□□□□ -0.49
NDEL1-216ENST00000583066 PRDM2Q13029 1718 aa11.97□□□□□ -0.49
NDEL1-216ENST00000583066 AQRO60306 1485 aaKnown RBP eCLIP11.96□□□□□ -0.496e-9■■■■□ 20
NDEL1-216ENST00000583066 FBLN2P98095 1184 aa11.96□□□□□ -0.49
NDEL1-216ENST00000583066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.95□□□□□ -0.58e-10■■□□□ 12.4
NDEL1-216ENST00000583066 TOPBP1Q92547 1522 aa11.94□□□□□ -0.5
NDEL1-216ENST00000583066 TARBP1Q13395 1621 aaKnown RBP11.93□□□□□ -0.5
NDEL1-216ENST00000583066 POTEHQ6S545 545 aa11.89□□□□□ -0.51
NDEL1-216ENST00000583066 KIF13AQ9H1H9 1805 aa11.88□□□□□ -0.51
NDEL1-216ENST00000583066 KDM4FA0A1W2PPD8 638 aa11.87□□□□□ -0.51
NDEL1-216ENST00000583066 GAPVD1Q14C86 1478 aa11.87□□□□□ -0.51
NDEL1-216ENST00000583066 SYNJ1O43426 1573 aa11.84□□□□□ -0.51
NDEL1-216ENST00000583066 DNMBPQ6XZF7 1577 aa11.83□□□□□ -0.52
NDEL1-216ENST00000583066 SNAPC4Q5SXM2 1469 aa11.83□□□□□ -0.52
NDEL1-216ENST00000583066 U3KPZ7 1027 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms