RNA–Protein interactions for RNA: ENST00000582933.5

PPP4R1-223, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-223ENST00000582933 SAMD1Q6SPF0 538 aaPredicted RBP8.43□□□□□ -1.06
PPP4R1-223ENST00000582933 ORAI2Q96SN7 254 aa8.43□□□□□ -1.06
PPP4R1-223ENST00000582933 CARD11Q9BXL7 1154 aa8.43□□□□□ -1.06
PPP4R1-223ENST00000582933 BCL11BQ9C0K0 894 aaPredicted RBP8.43□□□□□ -1.06
PPP4R1-223ENST00000582933 JCADQ9P266 1359 aa8.43□□□□□ -1.06
PPP4R1-223ENST00000582933 MED1Q15648 1581 aaPredicted RBP8.43□□□□□ -1.06
PPP4R1-223ENST00000582933 TOPAZ1Q8N9V7 1692 aa8.43□□□□□ -1.06
PPP4R1-223ENST00000582933 ESCO1Q5FWF5 840 aa8.42□□□□□ -1.06
PPP4R1-223ENST00000582933 LHX8Q68G74 356 aa8.42□□□□□ -1.06
PPP4R1-223ENST00000582933 SPINK5Q9NQ38 1064 aaPredicted RBP8.42□□□□□ -1.06
PPP4R1-223ENST00000582933 SOS2Q07890 1332 aaPredicted RBP8.42□□□□□ -1.06
PPP4R1-223ENST00000582933 NPHP3Q7Z494 1330 aa8.42□□□□□ -1.06
PPP4R1-223ENST00000582933 PRR36Q9H6K5 1346 aa8.42□□□□□ -1.06
PPP4R1-223ENST00000582933 SHPRHQ149N8 1683 aa8.42□□□□□ -1.06
PPP4R1-223ENST00000582933 USP47Q96K76 1375 aa8.41□□□□□ -1.06
PPP4R1-223ENST00000582933 NUTM2FA1L443 756 aa8.41□□□□□ -1.06
PPP4R1-223ENST00000582933 ITSN1Q15811 1721 aa8.4□□□□□ -1.06
PPP4R1-223ENST00000582933 PNPLA6Q8IY17 1366 aa8.4□□□□□ -1.06
PPP4R1-223ENST00000582933 DDX17Q92841 729 aaKnown RBP8.4□□□□□ -1.06
PPP4R1-223ENST00000582933 ATF5Q9Y2D1 282 aaPredicted RBP8.4□□□□□ -1.06
PPP4R1-223ENST00000582933 SALL2Q9Y467 1007 aaPredicted RBP8.4□□□□□ -1.06
PPP4R1-223ENST00000582933 TNS3Q68CZ2 1445 aa8.39□□□□□ -1.07
PPP4R1-223ENST00000582933 SPATA31A6Q5VVP1 1343 aa8.39□□□□□ -1.07
PPP4R1-223ENST00000582933 CDK11BP21127 795 aaKnown RBP8.39□□□□□ -1.07
PPP4R1-223ENST00000582933 CDK19Q9BWU1 502 aa8.39□□□□□ -1.07
PPP4R1-223ENST00000582933 PHF8Q9UPP1 1060 aa8.39□□□□□ -1.07
PPP4R1-223ENST00000582933 LRP6O75581 1613 aa8.39□□□□□ -1.07
PPP4R1-223ENST00000582933 SBNO1A3KN83 1393 aa8.38□□□□□ -1.07
PPP4R1-223ENST00000582933 POLR3AO14802 1390 aaPredicted RBP8.38□□□□□ -1.07
PPP4R1-223ENST00000582933 EVC2Q86UK5 1308 aa8.38□□□□□ -1.07
PPP4R1-223ENST00000582933 FOXO3O43524 673 aa8.38□□□□□ -1.07
PPP4R1-223ENST00000582933 NUDT16Q96DE0 195 aaKnown RBP8.38□□□□□ -1.07
PPP4R1-223ENST00000582933 COL22A1Q8NFW1 1626 aaPredicted RBP8.38□□□□□ -1.07
PPP4R1-223ENST00000582933 PPIP5K1Q6PFW1 1433 aa8.37□□□□□ -1.07
PPP4R1-223ENST00000582933 ATAD2Q6PL18 1390 aa8.37□□□□□ -1.07
PPP4R1-223ENST00000582933 HSP90B1P14625 803 aaKnown RBP8.37□□□□□ -1.07
PPP4R1-223ENST00000582933 SRPK2P78362 688 aaKnown RBP8.37□□□□□ -1.07
PPP4R1-223ENST00000582933 XPCQ01831 940 aaPredicted RBP8.37□□□□□ -1.07
PPP4R1-223ENST00000582933 AAMPQ13685 434 aa8.37□□□□□ -1.07
PPP4R1-223ENST00000582933 LRRC59Q96AG4 307 aaKnown RBP8.37□□□□□ -1.07
PPP4R1-223ENST00000582933 TESK2Q96S53 571 aa8.37□□□□□ -1.07
PPP4R1-223ENST00000582933 CCDC61Q9Y6R9 512 aa8.37□□□□□ -1.07
PPP4R1-223ENST00000582933 TRPM3Q9HCF6 1732 aaPredicted RBP8.37□□□□□ -1.07
PPP4R1-223ENST00000582933 ARHGEF10O15013 1369 aa8.36□□□□□ -1.07
PPP4R1-223ENST00000582933 HAX1O00165 279 aa8.36□□□□□ -1.07
PPP4R1-223ENST00000582933 CABP2Q9NPB3 220 aa8.36□□□□□ -1.07
PPP4R1-223ENST00000582933 SPATA31A3Q5VYP0 1347 aa8.35□□□□□ -1.07
PPP4R1-223ENST00000582933 ST20-MTHFSA0A0A6YYL1 179 aa8.35□□□□□ -1.07
PPP4R1-223ENST00000582933 PLEKHG3A1L390 1219 aa8.35□□□□□ -1.07
PPP4R1-223ENST00000582933 PMFBP1Q8TBY8 1022 aa8.35□□□□□ -1.07
PPP4R1-223ENST00000582933 RSPH6AQ9H0K4 717 aa8.35□□□□□ -1.07
PPP4R1-223ENST00000582933 RGPD8O14715 1765 aaPredicted RBP8.35□□□□□ -1.07
PPP4R1-223ENST00000582933 DISP3Q9P2K9 1392 aa8.35□□□□□ -1.07
PPP4R1-223ENST00000582933 NINLQ9Y2I6 1382 aa8.35□□□□□ -1.07
PPP4R1-223ENST00000582933 ALS2Q96Q42 1657 aa8.34□□□□□ -1.07
PPP4R1-223ENST00000582933 KRT28Q7Z3Y7 464 aa8.34□□□□□ -1.07
PPP4R1-223ENST00000582933 NGDNQ8NEJ9 315 aaKnown RBP8.34□□□□□ -1.07
PPP4R1-223ENST00000582933 USP6P35125 1406 aa8.34□□□□□ -1.07
PPP4R1-223ENST00000582933 BRD4O60885 1362 aaPredicted RBP8.34□□□□□ -1.07
PPP4R1-223ENST00000582933 ACEP12821 1306 aa8.33□□□□□ -1.08
PPP4R1-223ENST00000582933 PSME1Q06323 249 aa8.33□□□□□ -1.08
PPP4R1-223ENST00000582933 CPSF1Q10570 1443 aaKnown RBP8.33□□□□□ -1.08
PPP4R1-223ENST00000582933 NRKQ7Z2Y5 1582 aa8.33□□□□□ -1.08
PPP4R1-223ENST00000582933 PUS7Q96PZ0 661 aaKnown RBP8.33□□□□□ -1.08
PPP4R1-223ENST00000582933 ABCA3Q99758 1704 aa8.33□□□□□ -1.08
PPP4R1-223ENST00000582933 RBM42Q9BTD8 480 aaKnown RBP8.33□□□□□ -1.08
PPP4R1-223ENST00000582933 CD163L1Q9NR16 1453 aa8.32□□□□□ -1.08
PPP4R1-223ENST00000582933 SSH2Q76I76 1423 aa8.32□□□□□ -1.08
PPP4R1-223ENST00000582933 HAP1P54257 671 aaPredicted RBP8.32□□□□□ -1.08
PPP4R1-223ENST00000582933 BCCIPQ9P287 314 aaKnown RBP eCLIP8.32□□□□□ -1.08
PPP4R1-223ENST00000582933 TMF1P82094 1093 aa8.31□□□□□ -1.08
PPP4R1-223ENST00000582933 FKBP8Q14318 412 aa8.31□□□□□ -1.08
PPP4R1-223ENST00000582933 CABP1Q9NZU7 370 aa8.31□□□□□ -1.08
PPP4R1-223ENST00000582933 CRYBG1Q9Y4K1 1723 aa8.31□□□□□ -1.08
PPP4R1-223ENST00000582933 MON2Q7Z3U7 1717 aa8.3□□□□□ -1.08
PPP4R1-223ENST00000582933 NUTM2BA6NNL0 878 aaPredicted RBP8.3□□□□□ -1.08
PPP4R1-223ENST00000582933 NUTM2EB1AL46 878 aaPredicted RBP8.3□□□□□ -1.08
PPP4R1-223ENST00000582933 EIF4G2P78344 907 aaKnown RBP eCLIP8.3□□□□□ -1.08
PPP4R1-223ENST00000582933 MEX3CQ5U5Q3 659 aaKnown RBP8.3□□□□□ -1.08
PPP4R1-223ENST00000582933 NUTM2AQ8IVF1 878 aaPredicted RBP8.3□□□□□ -1.08
PPP4R1-223ENST00000582933 DHX37Q8IY37 1157 aaKnown RBP8.3□□□□□ -1.08
PPP4R1-223ENST00000582933 A0A1W2PP64 1363 aa8.3□□□□□ -1.08
PPP4R1-223ENST00000582933 USP19O94966 1318 aa8.29□□□□□ -1.08
PPP4R1-223ENST00000582933 EDC4Q6P2E9 1401 aaKnown RBP8.29□□□□□ -1.08
PPP4R1-223ENST00000582933 HMGB1P09429 215 aaKnown RBP8.29□□□□□ -1.08
PPP4R1-223ENST00000582933 HSPA5P11021 654 aaKnown RBP8.29□□□□□ -1.08
PPP4R1-223ENST00000582933 TMEM132AQ24JP5 1023 aa8.29□□□□□ -1.08
PPP4R1-223ENST00000582933 CDCA8Q53HL2 280 aa8.29□□□□□ -1.08
PPP4R1-223ENST00000582933 KTN1Q86UP2 1357 aaKnown RBP8.29□□□□□ -1.08
PPP4R1-223ENST00000582933 ANKRD36BQ8N2N9 1353 aa8.29□□□□□ -1.08
PPP4R1-223ENST00000582933 PIK3C2AO00443 1686 aa8.29□□□□□ -1.08
PPP4R1-223ENST00000582933 MYOM1P52179 1685 aa8.29□□□□□ -1.08
PPP4R1-223ENST00000582933 AKAP12Q02952 1782 aa8.29□□□□□ -1.08
PPP4R1-223ENST00000582933 PHRF1Q9P1Y6 1649 aaKnown RBP8.29□□□□□ -1.08
PPP4R1-223ENST00000582933 PAK3O75914 559 aaPredicted RBP8.28□□□□□ -1.08
PPP4R1-223ENST00000582933 ADAMTS2O95450 1211 aa8.28□□□□□ -1.08
PPP4R1-223ENST00000582933 LMOD2Q6P5Q4 547 aa8.28□□□□□ -1.08
PPP4R1-223ENST00000582933 SLIT3O75094 1523 aa8.28□□□□□ -1.08
PPP4R1-223ENST00000582933 TTC21AQ8NDW8 1320 aa8.28□□□□□ -1.08
PPP4R1-223ENST00000582933 RBM10P98175 930 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms