RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 NFKBIBQ15653 356 aa17.6■□□□□ 0.41
GGA3-214ENST00000582717 NGEFQ8N5V2 710 aa17.6■□□□□ 0.41
GGA3-214ENST00000582717 FAM135BQ49AJ0 1406 aa17.6■□□□□ 0.41
GGA3-214ENST00000582717 COL3A1P02461 1466 aaPredicted RBP17.6■□□□□ 0.41
GGA3-214ENST00000582717 RUNDC1Q96C34 613 aa17.6■□□□□ 0.41
GGA3-214ENST00000582717 WASLO00401 505 aaPredicted RBP17.59■□□□□ 0.41
GGA3-214ENST00000582717 LTKP29376 864 aa17.58■□□□□ 0.4
GGA3-214ENST00000582717 NKTRP30414 1462 aaKnown RBP17.58■□□□□ 0.4
GGA3-214ENST00000582717 WWC1Q8IX03 1113 aa17.58■□□□□ 0.4
GGA3-214ENST00000582717 E9PSI1 815 aa17.57■□□□□ 0.4
GGA3-214ENST00000582717 C8orf34Q49A92 452 aa17.57■□□□□ 0.4
GGA3-214ENST00000582717 SKAP1Q86WV1 359 aa17.57■□□□□ 0.4
GGA3-214ENST00000582717 RRP7AQ9Y3A4 280 aaKnown RBP17.57■□□□□ 0.4
GGA3-214ENST00000582717 PLEKHG1Q9ULL1 1385 aa17.57■□□□□ 0.4
GGA3-214ENST00000582717 TCP11L2Q8N4U5 519 aa17.56■□□□□ 0.4
GGA3-214ENST00000582717 SIRT1Q96EB6 747 aa17.56■□□□□ 0.4
GGA3-214ENST00000582717 PPIP5K1Q6PFW1 1433 aa17.56■□□□□ 0.4
GGA3-214ENST00000582717 ROBO2Q9HCK4 1378 aa17.55■□□□□ 0.4
GGA3-214ENST00000582717 ADGRB2O60241 1585 aa17.55■□□□□ 0.4
GGA3-214ENST00000582717 ANO8Q9HCE9 1232 aaPredicted RBP17.55■□□□□ 0.4
GGA3-214ENST00000582717 U2AF1L5P0DN76 240 aaPredicted RBP17.55■□□□□ 0.4
GGA3-214ENST00000582717 TRHP20396 242 aaPredicted RBP17.55■□□□□ 0.4
GGA3-214ENST00000582717 U2AF1Q01081 240 aaKnown RBP eCLIP17.55■□□□□ 0.4
GGA3-214ENST00000582717 NEUROD2Q15784 382 aa17.55■□□□□ 0.4
GGA3-214ENST00000582717 PLPPR3Q6T4P5 718 aa17.55■□□□□ 0.4
GGA3-214ENST00000582717 CPSF1Q10570 1443 aaKnown RBP17.55■□□□□ 0.4
GGA3-214ENST00000582717 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.54■□□□□ 0.4
GGA3-214ENST00000582717 PHF23Q9BUL5 403 aaPredicted RBP17.54■□□□□ 0.4
GGA3-214ENST00000582717 CDC42BPGQ6DT37 1551 aa17.54■□□□□ 0.4
GGA3-214ENST00000582717 SLIT1O75093 1534 aa17.53■□□□□ 0.4
GGA3-214ENST00000582717 NCKAP5LQ9HCH0 1330 aa17.53■□□□□ 0.4
GGA3-214ENST00000582717 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.53■□□□□ 0.4
GGA3-214ENST00000582717 NUDT16Q96DE0 195 aaKnown RBP17.52■□□□□ 0.4
GGA3-214ENST00000582717 ARHGAP23Q9P227 1491 aa17.52■□□□□ 0.4
GGA3-214ENST00000582717 MON2Q7Z3U7 1717 aa17.52■□□□□ 0.4
GGA3-214ENST00000582717 EDC4Q6P2E9 1401 aaKnown RBP17.52■□□□□ 0.39
GGA3-214ENST00000582717 RTN4Q9NQC3 1192 aaKnown RBP17.51■□□□□ 0.39
GGA3-214ENST00000582717 AKAP12Q02952 1782 aa17.51■□□□□ 0.39
GGA3-214ENST00000582717 PTPRUQ92729 1446 aa17.51■□□□□ 0.39
GGA3-214ENST00000582717 PRR36Q9H6K5 1346 aa17.51■□□□□ 0.39
GGA3-214ENST00000582717 PNPLA6Q8IY17 1366 aa17.5■□□□□ 0.39
GGA3-214ENST00000582717 ITSN1Q15811 1721 aa17.5■□□□□ 0.39
GGA3-214ENST00000582717 VIRMAQ69YN4 1812 aaKnown RBP17.5■□□□□ 0.39
GGA3-214ENST00000582717 U2SURPO15042 1029 aaKnown RBP17.5■□□□□ 0.39
GGA3-214ENST00000582717 SLC4A3P48751 1232 aa17.49■□□□□ 0.39
GGA3-214ENST00000582717 FRAT1Q92837 279 aaPredicted RBP17.49■□□□□ 0.39
GGA3-214ENST00000582717 SLC26A8Q96RN1 970 aa17.49■□□□□ 0.39
GGA3-214ENST00000582717 PRKCSHP14314 528 aaPredicted RBP17.49■□□□□ 0.39
GGA3-214ENST00000582717 FBLN1P23142 703 aa17.49■□□□□ 0.39
GGA3-214ENST00000582717 CCDC27Q2M243 656 aa17.49■□□□□ 0.39
GGA3-214ENST00000582717 CCDC61Q9Y6R9 512 aa17.49■□□□□ 0.39
GGA3-214ENST00000582717 BCAR3O75815 825 aa17.48■□□□□ 0.39
GGA3-214ENST00000582717 PLEKHF1Q96S99 279 aa17.48■□□□□ 0.39
GGA3-214ENST00000582717 EID1Q9Y6B2 187 aa17.48■□□□□ 0.39
GGA3-214ENST00000582717 MAP2P11137 1827 aaKnown RBP17.48■□□□□ 0.39
GGA3-214ENST00000582717 NME9Q86XW9 330 aa17.47■□□□□ 0.39
GGA3-214ENST00000582717 WDR63Q8IWG1 891 aa17.47■□□□□ 0.39
GGA3-214ENST00000582717 TOPAZ1Q8N9V7 1692 aa17.47■□□□□ 0.39
GGA3-214ENST00000582717 BRPF3Q9ULD4 1205 aa17.47■□□□□ 0.39
GGA3-214ENST00000582717 DIAPH1O60610 1272 aaKnown RBP17.46■□□□□ 0.39
GGA3-214ENST00000582717 ZRANB1Q9UGI0 708 aa17.46■□□□□ 0.39
GGA3-214ENST00000582717 NCBP3Q53F19 620 aaKnown RBP17.46■□□□□ 0.39
GGA3-214ENST00000582717 POLKQ9UBT6 870 aa17.46■□□□□ 0.39
GGA3-214ENST00000582717 RGS3P49796 1198 aa17.44■□□□□ 0.38
GGA3-214ENST00000582717 MAPK8IP3Q9UPT6 1336 aa17.44■□□□□ 0.38
GGA3-214ENST00000582717 NRKQ7Z2Y5 1582 aa17.43■□□□□ 0.38
GGA3-214ENST00000582717 LRRC7Q96NW7 1537 aa17.43■□□□□ 0.38
GGA3-214ENST00000582717 PDE3AQ14432 1141 aa17.43■□□□□ 0.38
GGA3-214ENST00000582717 TMPOP42166 694 aaKnown RBP17.42■□□□□ 0.38
GGA3-214ENST00000582717 THEMISQ8N1K5 641 aaPredicted RBP17.42■□□□□ 0.38
GGA3-214ENST00000582717 EMILIN1Q9Y6C2 1016 aa17.42■□□□□ 0.38
GGA3-214ENST00000582717 RIMS1Q86UR5 1692 aaKnown RBP17.42■□□□□ 0.38
GGA3-214ENST00000582717 DIP2AQ14689 1571 aa17.42■□□□□ 0.38
GGA3-214ENST00000582717 AMOTL2Q9Y2J4 779 aa17.41■□□□□ 0.38
GGA3-214ENST00000582717 TBX22Q9Y458 520 aa17.41■□□□□ 0.38
GGA3-214ENST00000582717 CEP170BQ9Y4F5 1589 aaPredicted RBP17.41■□□□□ 0.38
GGA3-214ENST00000582717 FRAT2O75474 233 aaPredicted RBP17.41■□□□□ 0.38
GGA3-214ENST00000582717 PTCH1Q13635 1447 aa17.41■□□□□ 0.38
GGA3-214ENST00000582717 NUTM2FA1L443 756 aa17.4■□□□□ 0.38
GGA3-214ENST00000582717 TRIM35Q9UPQ4 493 aa17.4■□□□□ 0.38
GGA3-214ENST00000582717 CDK12Q9NYV4 1490 aaPredicted RBP17.4■□□□□ 0.38
GGA3-214ENST00000582717 AATKQ6ZMQ8 1374 aa17.4■□□□□ 0.38
GGA3-214ENST00000582717 XRN1Q8IZH2 1706 aaKnown RBP17.39■□□□□ 0.38
GGA3-214ENST00000582717 BECN1Q14457 450 aa17.39■□□□□ 0.37
GGA3-214ENST00000582717 COG3Q96JB2 828 aa17.39■□□□□ 0.37
GGA3-214ENST00000582717 ZNF692Q9BU19 519 aaPredicted RBP17.39■□□□□ 0.37
GGA3-214ENST00000582717 AAMPQ13685 434 aa17.38■□□□□ 0.37
GGA3-214ENST00000582717 RARSP54136 660 aaKnown RBP17.38■□□□□ 0.37
GGA3-214ENST00000582717 RSPH6AQ9H0K4 717 aa17.38■□□□□ 0.37
GGA3-214ENST00000582717 MYH16Q9H6N6 1097 aa17.38■□□□□ 0.37
GGA3-214ENST00000582717 ACEP12821 1306 aa17.38■□□□□ 0.37
GGA3-214ENST00000582717 PLEKHG3A1L390 1219 aa17.37■□□□□ 0.37
GGA3-214ENST00000582717 USP19O94966 1318 aa17.37■□□□□ 0.37
GGA3-214ENST00000582717 FCHSD2O94868 740 aa17.36■□□□□ 0.37
GGA3-214ENST00000582717 TTC21BQ7Z4L5 1316 aa17.36■□□□□ 0.37
GGA3-214ENST00000582717 PRKAR2BP31323 418 aa17.36■□□□□ 0.37
GGA3-214ENST00000582717 RRS1Q15050 365 aaKnown RBP17.36■□□□□ 0.37
GGA3-214ENST00000582717 TSR2Q969E8 191 aaKnown RBP17.36■□□□□ 0.37
GGA3-214ENST00000582717 CLUAP1Q96AJ1 413 aa17.36■□□□□ 0.37
GGA3-214ENST00000582717 USP6P35125 1406 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms