RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 CDK19Q9BWU1 502 aa16.9■□□□□ 0.3
CDK5RAP3-223ENST00000582114 NRAPQ86VF7 1730 aa16.9■□□□□ 0.3
CDK5RAP3-223ENST00000582114 SRCAPQ6ZRS2 3230 aa16.89■□□□□ 0.29
CDK5RAP3-223ENST00000582114 FAM98CQ17RN3 349 aaKnown RBP16.89■□□□□ 0.29
CDK5RAP3-223ENST00000582114 NUTM2GQ5VZR2 741 aa16.89■□□□□ 0.29
CDK5RAP3-223ENST00000582114 DEFB132Q7Z7B7 95 aa16.89■□□□□ 0.29
CDK5RAP3-223ENST00000582114 ZRANB1Q9UGI0 708 aa16.89■□□□□ 0.29
CDK5RAP3-223ENST00000582114 ITSN1Q15811 1721 aa16.89■□□□□ 0.29
CDK5RAP3-223ENST00000582114 KRT27Q7Z3Y8 459 aa16.88■□□□□ 0.29
CDK5RAP3-223ENST00000582114 BLMP54132 1417 aaPredicted RBP16.87■□□□□ 0.29
CDK5RAP3-223ENST00000582114 COL14A1Q05707 1796 aaKnown RBP16.87■□□□□ 0.29
CDK5RAP3-223ENST00000582114 PRDM11Q9NQV5 511 aa16.87■□□□□ 0.29
CDK5RAP3-223ENST00000582114 CRYBG1Q9Y4K1 1723 aa16.87■□□□□ 0.29
CDK5RAP3-223ENST00000582114 ONECUT3O60422 494 aaPredicted RBP16.86■□□□□ 0.29
CDK5RAP3-223ENST00000582114 KIAA1210Q9ULL0 1709 aa16.85■□□□□ 0.29
CDK5RAP3-223ENST00000582114 SF3B2Q13435 895 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP3-223ENST00000582114 CHRNA2Q15822 529 aa16.85■□□□□ 0.29
CDK5RAP3-223ENST00000582114 ACEP12821 1306 aa16.85■□□□□ 0.29
CDK5RAP3-223ENST00000582114 FAM182BQ5T319 152 aa16.84■□□□□ 0.29
CDK5RAP3-223ENST00000582114 KIAA0232Q92628 1395 aa16.84■□□□□ 0.29
CDK5RAP3-223ENST00000582114 TOPAZ1Q8N9V7 1692 aa16.84■□□□□ 0.29
CDK5RAP3-223ENST00000582114 ZC3H6P61129 1189 aaKnown RBP16.83■□□□□ 0.28
CDK5RAP3-223ENST00000582114 NBPF8Q3BBV2 869 aa16.83■□□□□ 0.28
CDK5RAP3-223ENST00000582114 PHRF1Q9P1Y6 1649 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP3-223ENST00000582114 SPATA31A5Q5VU36 1347 aa16.82■□□□□ 0.28
CDK5RAP3-223ENST00000582114 SPATA31A7Q8IWB4 1347 aa16.82■□□□□ 0.28
CDK5RAP3-223ENST00000582114 SRPK2P78362 688 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP3-223ENST00000582114 STRN4Q9NRL3 753 aa16.82■□□□□ 0.28
CDK5RAP3-223ENST00000582114 CCDC61Q9Y6R9 512 aa16.82■□□□□ 0.28
CDK5RAP3-223ENST00000582114 POLR3AO14802 1390 aaPredicted RBP16.81■□□□□ 0.28
CDK5RAP3-223ENST00000582114 CABP2Q9NPB3 220 aa16.81■□□□□ 0.28
CDK5RAP3-223ENST00000582114 CENPJQ9HC77 1338 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-223ENST00000582114 PLEKHG3A1L390 1219 aa16.79■□□□□ 0.28
CDK5RAP3-223ENST00000582114 ABTB2Q8N961 1025 aa16.79■□□□□ 0.28
CDK5RAP3-223ENST00000582114 L3MBTL2Q969R5 705 aa16.79■□□□□ 0.28
CDK5RAP3-223ENST00000582114 SIN3AQ96ST3 1273 aa16.79■□□□□ 0.28
CDK5RAP3-223ENST00000582114 PPIP5K1Q6PFW1 1433 aa16.79■□□□□ 0.28
CDK5RAP3-223ENST00000582114 QRICH2Q9H0J4 1663 aa16.78■□□□□ 0.28
CDK5RAP3-223ENST00000582114 USP35Q9P2H5 1018 aa16.78■□□□□ 0.28
CDK5RAP3-223ENST00000582114 NEUROD1Q13562 356 aa16.77■□□□□ 0.28
CDK5RAP3-223ENST00000582114 SPATA31A1Q5TZJ5 1347 aa16.76■□□□□ 0.27
CDK5RAP3-223ENST00000582114 NRKQ7Z2Y5 1582 aa16.76■□□□□ 0.27
CDK5RAP3-223ENST00000582114 THSD7AQ9UPZ6 1657 aa16.75■□□□□ 0.27
CDK5RAP3-223ENST00000582114 BAG6P46379 1132 aa16.75■□□□□ 0.27
CDK5RAP3-223ENST00000582114 EVA1CP58658 441 aa16.75■□□□□ 0.27
CDK5RAP3-223ENST00000582114 ZBTB7CA1YPR0 619 aa16.74■□□□□ 0.27
CDK5RAP3-223ENST00000582114 PSDA5PKW4 1024 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP3-223ENST00000582114 EN1Q05925 392 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP3-223ENST00000582114 CABP1Q9NZU7 370 aa16.73■□□□□ 0.27
CDK5RAP3-223ENST00000582114 CAMTA1Q9Y6Y1 1673 aa16.72■□□□□ 0.27
CDK5RAP3-223ENST00000582114 SSH2Q76I76 1423 aa16.72■□□□□ 0.27
CDK5RAP3-223ENST00000582114 LARP1Q6PKG0 1096 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-223ENST00000582114 USP19O94966 1318 aa16.71■□□□□ 0.27
CDK5RAP3-223ENST00000582114 TRPM1Q7Z4N2 1603 aa16.71■□□□□ 0.27
CDK5RAP3-223ENST00000582114 RGPD1P0DJD0 1748 aa16.71■□□□□ 0.27
CDK5RAP3-223ENST00000582114 GCP02774 474 aa16.71■□□□□ 0.27
CDK5RAP3-223ENST00000582114 NLRP13Q86W25 1043 aa16.71■□□□□ 0.27
CDK5RAP3-223ENST00000582114 ROCK2O75116 1388 aaKnown RBP16.7■□□□□ 0.26
CDK5RAP3-223ENST00000582114 LMO7Q8WWI1 1683 aa16.69■□□□□ 0.26
CDK5RAP3-223ENST00000582114 CPDO75976 1380 aa16.69■□□□□ 0.26
CDK5RAP3-223ENST00000582114 TRIM37O94972 964 aa16.69■□□□□ 0.26
CDK5RAP3-223ENST00000582114 TNS1Q9HBL0 1735 aaKnown RBP16.69■□□□□ 0.26
CDK5RAP3-223ENST00000582114 USP6P35125 1406 aa16.69■□□□□ 0.26
CDK5RAP3-223ENST00000582114 EVC2Q86UK5 1308 aa16.69■□□□□ 0.26
CDK5RAP3-223ENST00000582114 NLRP6P59044 892 aa16.68■□□□□ 0.26
CDK5RAP3-223ENST00000582114 EZH2Q15910 746 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-223ENST00000582114 PDE3BQ13370 1112 aa16.66■□□□□ 0.26
CDK5RAP3-223ENST00000582114 FAM196AQ6ZSG2 479 aa16.66■□□□□ 0.26
CDK5RAP3-223ENST00000582114 BARGINQ6ZT62 677 aa16.66■□□□□ 0.26
CDK5RAP3-223ENST00000582114 TCP11L2Q8N4U5 519 aa16.66■□□□□ 0.26
CDK5RAP3-223ENST00000582114 COL5A2P05997 1499 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP3-223ENST00000582114 SOX12O15370 315 aa16.65■□□□□ 0.26
CDK5RAP3-223ENST00000582114 PIK3C2AO00443 1686 aa16.65■□□□□ 0.26
CDK5RAP3-223ENST00000582114 APBA3O96018 575 aa16.64■□□□□ 0.25
CDK5RAP3-223ENST00000582114 R3HDM1Q15032 1099 aaKnown RBP16.64■□□□□ 0.25
CDK5RAP3-223ENST00000582114 BRD4O60885 1362 aaPredicted RBP16.64■□□□□ 0.25
CDK5RAP3-223ENST00000582114 SLIT3O75094 1523 aa16.63■□□□□ 0.25
CDK5RAP3-223ENST00000582114 DISP2A7MBM2 1401 aa16.62■□□□□ 0.25
CDK5RAP3-223ENST00000582114 LRP5O75197 1615 aa16.61■□□□□ 0.25
CDK5RAP3-223ENST00000582114 CAMKK2Q96RR4 588 aa16.61■□□□□ 0.25
CDK5RAP3-223ENST00000582114 THRAP3Q9Y2W1 955 aaKnown RBP16.61■□□□□ 0.25
CDK5RAP3-223ENST00000582114 TTC21BQ7Z4L5 1316 aa16.61■□□□□ 0.25
CDK5RAP3-223ENST00000582114 CRB1P82279 1406 aa16.61■□□□□ 0.25
CDK5RAP3-223ENST00000582114 AKAP12Q02952 1782 aa16.6■□□□□ 0.25
CDK5RAP3-223ENST00000582114 TOM1L2Q6ZVM7 507 aa16.6■□□□□ 0.25
CDK5RAP3-223ENST00000582114 AATKQ6ZMQ8 1374 aa16.6■□□□□ 0.25
CDK5RAP3-223ENST00000582114 AXIN2Q9Y2T1 843 aa16.59■□□□□ 0.25
CDK5RAP3-223ENST00000582114 ZNF692Q9BU19 519 aaPredicted RBP16.58■□□□□ 0.24
CDK5RAP3-223ENST00000582114 CARD11Q9BXL7 1154 aa16.58■□□□□ 0.24
CDK5RAP3-223ENST00000582114 KTN1Q86UP2 1357 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-223ENST00000582114 PARP4Q9UKK3 1724 aaKnown RBP16.58■□□□□ 0.24
CDK5RAP3-223ENST00000582114 COL18A1P39060 1754 aa16.58■□□□□ 0.24
CDK5RAP3-223ENST00000582114 CPSF1Q10570 1443 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP3-223ENST00000582114 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.57■□□□□ 0.24
CDK5RAP3-223ENST00000582114 CSB-PGBD3P0DP91 1061 aa16.56■□□□□ 0.24
CDK5RAP3-223ENST00000582114 ARHGEF25Q86VW2 580 aa16.56■□□□□ 0.24
CDK5RAP3-223ENST00000582114 RGPD5Q99666 1765 aa16.56■□□□□ 0.24
CDK5RAP3-223ENST00000582114 LRRC37A3O60309 1634 aa16.56■□□□□ 0.24
CDK5RAP3-223ENST00000582114 TTC21AQ8NDW8 1320 aa16.55■□□□□ 0.24
CDK5RAP3-223ENST00000582114 TMC1Q8TDI8 760 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms