RNA–Protein interactions for RNA: ENST00000581850.1

LINC00473-203, long intergenic non-protein coding RNA 473, humanhuman

TSL 3 BASIC

Gene LINC00473, Length 929 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-203ENST00000581850 CPSF1Q10570 1443 aaKnown RBP22.76■■□□□ 1.23
LINC00473-203ENST00000581850 SSH2Q76I76 1423 aa22.76■■□□□ 1.23
LINC00473-203ENST00000581850 PUS7Q96PZ0 661 aaKnown RBP22.76■■□□□ 1.23
LINC00473-203ENST00000581850 ARHGEF10O15013 1369 aa22.76■■□□□ 1.23
LINC00473-203ENST00000581850 EIF4G2P78344 907 aaKnown RBP eCLIP22.75■■□□□ 1.23
LINC00473-203ENST00000581850 TMF1P82094 1093 aa22.74■■□□□ 1.23
LINC00473-203ENST00000581850 SLC24A1O60721 1099 aa22.72■■□□□ 1.23
LINC00473-203ENST00000581850 PAK3O75914 559 aaPredicted RBP22.71■■□□□ 1.23
LINC00473-203ENST00000581850 LMOD2Q6P5Q4 547 aa22.71■■□□□ 1.23
LINC00473-203ENST00000581850 SLC12A5Q9H2X9 1139 aa22.71■■□□□ 1.23
LINC00473-203ENST00000581850 CABLES1Q8TDN4 633 aa22.7■■□□□ 1.22
LINC00473-203ENST00000581850 RGS17Q9UGC6 210 aaPredicted RBP22.7■■□□□ 1.22
LINC00473-203ENST00000581850 A0A1W2PP64 1363 aa22.69■■□□□ 1.22
LINC00473-203ENST00000581850 BRD4O60885 1362 aaPredicted RBP22.69■■□□□ 1.22
LINC00473-203ENST00000581850 TMC1Q8TDI8 760 aa22.69■■□□□ 1.22
LINC00473-203ENST00000581850 USP54Q70EL1 1684 aa22.68■■□□□ 1.22
LINC00473-203ENST00000581850 KTN1Q86UP2 1357 aaKnown RBP22.68■■□□□ 1.22
LINC00473-203ENST00000581850 NINLQ9Y2I6 1382 aa22.68■■□□□ 1.22
LINC00473-203ENST00000581850 PLCH1Q4KWH8 1693 aa22.68■■□□□ 1.22
LINC00473-203ENST00000581850 ADAMTS2O95450 1211 aa22.67■■□□□ 1.22
LINC00473-203ENST00000581850 MEX3CQ5U5Q3 659 aaKnown RBP22.67■■□□□ 1.22
LINC00473-203ENST00000581850 PLEKHG5O94827 1062 aa22.66■■□□□ 1.22
LINC00473-203ENST00000581850 ZNF692Q9BU19 519 aaPredicted RBP22.66■■□□□ 1.22
LINC00473-203ENST00000581850 TTC21BQ7Z4L5 1316 aa22.65■■□□□ 1.22
LINC00473-203ENST00000581850 NUTM2GQ5VZR2 741 aa22.65■■□□□ 1.22
LINC00473-203ENST00000581850 SLIT3O75094 1523 aa22.64■■□□□ 1.21
LINC00473-203ENST00000581850 C8orf37Q96NL8 207 aa22.64■■□□□ 1.21
LINC00473-203ENST00000581850 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.63■■□□□ 1.21
LINC00473-203ENST00000581850 ANKRD36BQ8N2N9 1353 aa22.63■■□□□ 1.21
LINC00473-203ENST00000581850 USP19O94966 1318 aa22.62■■□□□ 1.21
LINC00473-203ENST00000581850 C11orf95C9JLR9 678 aaPredicted RBP22.62■■□□□ 1.21
LINC00473-203ENST00000581850 CDCA8Q53HL2 280 aa22.62■■□□□ 1.21
LINC00473-203ENST00000581850 ABTB2Q8N961 1025 aa22.62■■□□□ 1.21
LINC00473-203ENST00000581850 EDC4Q6P2E9 1401 aaKnown RBP22.62■■□□□ 1.21
LINC00473-203ENST00000581850 NRAPQ86VF7 1730 aa22.62■■□□□ 1.21
LINC00473-203ENST00000581850 NWD2Q9ULI1 1742 aa22.62■■□□□ 1.21
LINC00473-203ENST00000581850 AFF2P51816 1311 aa22.61■■□□□ 1.21
LINC00473-203ENST00000581850 COL14A1Q05707 1796 aaKnown RBP22.61■■□□□ 1.21
LINC00473-203ENST00000581850 HDGFL2Q7Z4V5 671 aaPredicted RBP22.61■■□□□ 1.21
LINC00473-203ENST00000581850 TTC21AQ8NDW8 1320 aa22.6■■□□□ 1.21
LINC00473-203ENST00000581850 KIF20BQ96Q89 1820 aa22.6■■□□□ 1.21
LINC00473-203ENST00000581850 TERF2IPQ9NYB0 399 aa22.6■■□□□ 1.21
LINC00473-203ENST00000581850 SLIT2O94813 1529 aa22.6■■□□□ 1.21
LINC00473-203ENST00000581850 HAP1P54257 671 aaPredicted RBP22.58■■□□□ 1.21
LINC00473-203ENST00000581850 POTEAQ6S8J7 498 aa22.58■■□□□ 1.21
LINC00473-203ENST00000581850 BCL9LQ86UU0 1499 aa22.57■■□□□ 1.2
LINC00473-203ENST00000581850 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.56■■□□□ 1.2
LINC00473-203ENST00000581850 FNBP4Q8N3X1 1017 aaPredicted RBP22.56■■□□□ 1.2
LINC00473-203ENST00000581850 NGLY1Q96IV0 654 aa22.56■■□□□ 1.2
LINC00473-203ENST00000581850 LMO7Q8WWI1 1683 aa22.55■■□□□ 1.2
LINC00473-203ENST00000581850 NLRP6P59044 892 aa22.55■■□□□ 1.2
LINC00473-203ENST00000581850 NLRP13Q86W25 1043 aa22.55■■□□□ 1.2
LINC00473-203ENST00000581850 ZRANB1Q9UGI0 708 aa22.55■■□□□ 1.2
LINC00473-203ENST00000581850 NFAT5O94916 1531 aa22.55■■□□□ 1.2
LINC00473-203ENST00000581850 USP31Q70CQ4 1352 aa22.54■■□□□ 1.2
LINC00473-203ENST00000581850 NME9Q86XW9 330 aa22.54■■□□□ 1.2
LINC00473-203ENST00000581850 POLR3GLQ9BT43 218 aa22.54■■□□□ 1.2
LINC00473-203ENST00000581850 OVOS2A0A0J9YW53 1432 aa22.54■■□□□ 1.2
LINC00473-203ENST00000581850 OVOS2Q6IE36 1432 aa22.54■■□□□ 1.2
LINC00473-203ENST00000581850 COL18A1P39060 1754 aa22.53■■□□□ 1.2
LINC00473-203ENST00000581850 KIAA0232Q92628 1395 aa22.53■■□□□ 1.2
LINC00473-203ENST00000581850 KIF7Q2M1P5 1343 aa22.53■■□□□ 1.2
LINC00473-203ENST00000581850 FAM83GA6ND36 823 aa22.52■■□□□ 1.2
LINC00473-203ENST00000581850 ZNF772Q68DY9 489 aaPredicted RBP22.52■■□□□ 1.2
LINC00473-203ENST00000581850 LTN1O94822 1766 aa22.52■■□□□ 1.2
LINC00473-203ENST00000581850 GCP02774 474 aa22.51■■□□□ 1.19
LINC00473-203ENST00000581850 RGPD5Q99666 1765 aa22.5■■□□□ 1.19
LINC00473-203ENST00000581850 ATRNO75882 1429 aa22.5■■□□□ 1.19
LINC00473-203ENST00000581850 NSD3Q9BZ95 1437 aa22.5■■□□□ 1.19
LINC00473-203ENST00000581850 CARD14Q9BXL6 1004 aa22.5■■□□□ 1.19
LINC00473-203ENST00000581850 USP21Q9UK80 565 aa22.5■■□□□ 1.19
LINC00473-203ENST00000581850 CPDO75976 1380 aa22.5■■□□□ 1.19
LINC00473-203ENST00000581850 ANKRD26Q9UPS8 1709 aa22.49■■□□□ 1.19
LINC00473-203ENST00000581850 ZC3H6P61129 1189 aaKnown RBP22.49■■□□□ 1.19
LINC00473-203ENST00000581850 GLI3P10071 1580 aa22.48■■□□□ 1.19
LINC00473-203ENST00000581850 CAMTA1Q9Y6Y1 1673 aa22.46■■□□□ 1.19
LINC00473-203ENST00000581850 CHRNA2Q15822 529 aa22.46■■□□□ 1.19
LINC00473-203ENST00000581850 PRDM11Q9NQV5 511 aa22.46■■□□□ 1.19
LINC00473-203ENST00000581850 CCDC7Q96M83 1385 aa22.46■■□□□ 1.19
LINC00473-203ENST00000581850 UNC5CLQ8IV45 518 aa22.45■■□□□ 1.18
LINC00473-203ENST00000581850 QTRT2Q9H974 415 aaKnown RBP22.45■■□□□ 1.18
LINC00473-203ENST00000581850 WASHC2AQ641Q2 1341 aa22.45■■□□□ 1.18
LINC00473-203ENST00000581850 BTG4Q9NY30 223 aa22.44■■□□□ 1.18
LINC00473-203ENST00000581850 FYB1O15117 783 aa22.43■■□□□ 1.18
LINC00473-203ENST00000581850 SOX12O15370 315 aa22.43■■□□□ 1.18
LINC00473-203ENST00000581850 PANK3Q9H999 370 aa22.42■■□□□ 1.18
LINC00473-203ENST00000581850 TRPC5Q9UL62 973 aaPredicted RBP22.42■■□□□ 1.18
LINC00473-203ENST00000581850 KCNH5Q8NCM2 988 aa22.41■■□□□ 1.18
LINC00473-203ENST00000581850 ABCC6O95255 1503 aa22.41■■□□□ 1.18
LINC00473-203ENST00000581850 ARHGEF25Q86VW2 580 aa22.4■■□□□ 1.18
LINC00473-203ENST00000581850 GGNBP2Q9H3C7 697 aa22.4■■□□□ 1.18
LINC00473-203ENST00000581850 COL5A2P05997 1499 aaPredicted RBP22.4■■□□□ 1.18
LINC00473-203ENST00000581850 RGS12O14924 1447 aa22.4■■□□□ 1.18
LINC00473-203ENST00000581850 AATKQ6ZMQ8 1374 aa22.39■■□□□ 1.18
LINC00473-203ENST00000581850 CDK12Q9NYV4 1490 aaPredicted RBP22.39■■□□□ 1.17
LINC00473-203ENST00000581850 ZBTB7CA1YPR0 619 aa22.38■■□□□ 1.17
LINC00473-203ENST00000581850 RXRBP28702 533 aa22.38■■□□□ 1.17
LINC00473-203ENST00000581850 RBM6P78332 1123 aaKnown RBP22.38■■□□□ 1.17
LINC00473-203ENST00000581850 COG3Q96JB2 828 aa22.38■■□□□ 1.17
LINC00473-203ENST00000581850 ZEB1P37275 1124 aaPredicted RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms