RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 ADAMTS8Q9UP79 889 aa19.51■□□□□ 0.71
MKS1-211ENST00000581761 POLR3AO14802 1390 aaPredicted RBP19.51■□□□□ 0.71
MKS1-211ENST00000581761 MED1Q15648 1581 aaPredicted RBP19.49■□□□□ 0.71
MKS1-211ENST00000581761 SMG6Q86US8 1419 aaKnown RBP19.49■□□□□ 0.71
MKS1-211ENST00000581761 ANKRD26Q9UPS8 1709 aa19.48■□□□□ 0.71
MKS1-211ENST00000581761 GGNBP2Q9H3C7 697 aa19.48■□□□□ 0.71
MKS1-211ENST00000581761 KIF20BQ96Q89 1820 aa19.48■□□□□ 0.71
MKS1-211ENST00000581761 CDC42BPGQ6DT37 1551 aa19.48■□□□□ 0.71
MKS1-211ENST00000581761 BRINP3Q76B58 766 aa19.47■□□□□ 0.71
MKS1-211ENST00000581761 NUDCQ9Y266 331 aa19.47■□□□□ 0.71
MKS1-211ENST00000581761 SUPT16HQ9Y5B9 1047 aaKnown RBP19.47■□□□□ 0.71
MKS1-211ENST00000581761 CCDC61Q9Y6R9 512 aa19.47■□□□□ 0.71
MKS1-211ENST00000581761 PRR36Q9H6K5 1346 aa19.47■□□□□ 0.71
MKS1-211ENST00000581761 CPSF1Q10570 1443 aaKnown RBP19.46■□□□□ 0.71
MKS1-211ENST00000581761 FYB1O15117 783 aa19.46■□□□□ 0.71
MKS1-211ENST00000581761 CFAP53Q96M91 514 aa19.46■□□□□ 0.71
MKS1-211ENST00000581761 C1orf167Q5SNV9 1468 aa19.46■□□□□ 0.71
MKS1-211ENST00000581761 FKBP8Q14318 412 aa19.45■□□□□ 0.7
MKS1-211ENST00000581761 ORAI2Q96SN7 254 aa19.45■□□□□ 0.7
MKS1-211ENST00000581761 SALL2Q9Y467 1007 aaPredicted RBP19.45■□□□□ 0.7
MKS1-211ENST00000581761 EDC4Q6P2E9 1401 aaKnown RBP19.44■□□□□ 0.7
MKS1-211ENST00000581761 NUTM2FA1L443 756 aa19.44■□□□□ 0.7
MKS1-211ENST00000581761 MTHFSP49914 203 aa19.44■□□□□ 0.7
MKS1-211ENST00000581761 PHF23Q9BUL5 403 aaPredicted RBP19.44■□□□□ 0.7
MKS1-211ENST00000581761 ITSN1Q15811 1721 aa19.43■□□□□ 0.7
MKS1-211ENST00000581761 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.43■□□□□ 0.7
MKS1-211ENST00000581761 TOPAZ1Q8N9V7 1692 aa19.43■□□□□ 0.7
MKS1-211ENST00000581761 PDE3BQ13370 1112 aa19.42■□□□□ 0.7
MKS1-211ENST00000581761 AKAP12Q02952 1782 aa19.42■□□□□ 0.7
MKS1-211ENST00000581761 DDX17Q92841 729 aaKnown RBP19.41■□□□□ 0.7
MKS1-211ENST00000581761 MON2Q7Z3U7 1717 aa19.41■□□□□ 0.7
MKS1-211ENST00000581761 SHPRHQ149N8 1683 aa19.4■□□□□ 0.7
MKS1-211ENST00000581761 PHLPP1O60346 1717 aa19.4■□□□□ 0.7
MKS1-211ENST00000581761 CCDC146Q8IYE0 955 aa19.39■□□□□ 0.69
MKS1-211ENST00000581761 ZNF692Q9BU19 519 aaPredicted RBP19.39■□□□□ 0.69
MKS1-211ENST00000581761 PLEKHG3A1L390 1219 aa19.38■□□□□ 0.69
MKS1-211ENST00000581761 FMN2Q9NZ56 1722 aa19.38■□□□□ 0.69
MKS1-211ENST00000581761 ESCO1Q5FWF5 840 aa19.37■□□□□ 0.69
MKS1-211ENST00000581761 NME9Q86XW9 330 aa19.36■□□□□ 0.69
MKS1-211ENST00000581761 AHDC1Q5TGY3 1603 aaPredicted RBP19.36■□□□□ 0.69
MKS1-211ENST00000581761 ACEP12821 1306 aa19.35■□□□□ 0.69
MKS1-211ENST00000581761 COL16A1Q07092 1604 aaPredicted RBP19.34■□□□□ 0.69
MKS1-211ENST00000581761 SOCS7O14512 581 aa19.34■□□□□ 0.69
MKS1-211ENST00000581761 ANKARQ7Z5J8 1434 aa19.34■□□□□ 0.69
MKS1-211ENST00000581761 JCADQ9P266 1359 aa19.33■□□□□ 0.69
MKS1-211ENST00000581761 APAF1O14727 1248 aa19.33■□□□□ 0.68
MKS1-211ENST00000581761 COG3Q96JB2 828 aa19.33■□□□□ 0.68
MKS1-211ENST00000581761 COL3A1P02461 1466 aaPredicted RBP19.33■□□□□ 0.68
MKS1-211ENST00000581761 NRKQ7Z2Y5 1582 aa19.32■□□□□ 0.68
MKS1-211ENST00000581761 TTC21BQ7Z4L5 1316 aa19.32■□□□□ 0.68
MKS1-211ENST00000581761 NHSL1Q5SYE7 1610 aa19.32■□□□□ 0.68
MKS1-211ENST00000581761 FOXO3O43524 673 aa19.31■□□□□ 0.68
MKS1-211ENST00000581761 IRX6P78412 446 aaPredicted RBP19.31■□□□□ 0.68
MKS1-211ENST00000581761 CDCA7LQ96GN5 454 aa19.31■□□□□ 0.68
MKS1-211ENST00000581761 ZRANB1Q9UGI0 708 aa19.31■□□□□ 0.68
MKS1-211ENST00000581761 USP6P35125 1406 aa19.31■□□□□ 0.68
MKS1-211ENST00000581761 SOS2Q07890 1332 aaPredicted RBP19.3■□□□□ 0.68
MKS1-211ENST00000581761 NGEFQ8N5V2 710 aa19.3■□□□□ 0.68
MKS1-211ENST00000581761 RUNDC1Q96C34 613 aa19.3■□□□□ 0.68
MKS1-211ENST00000581761 RGPD8O14715 1765 aaPredicted RBP19.29■□□□□ 0.68
MKS1-211ENST00000581761 U2AF1L5P0DN76 240 aaPredicted RBP19.29■□□□□ 0.68
MKS1-211ENST00000581761 U2AF1Q01081 240 aaKnown RBP eCLIP19.29■□□□□ 0.68
MKS1-211ENST00000581761 NGDNQ8NEJ9 315 aaKnown RBP19.29■□□□□ 0.68
MKS1-211ENST00000581761 PMFBP1Q8TBY8 1022 aa19.29■□□□□ 0.68
MKS1-211ENST00000581761 PHF8Q9UPP1 1060 aa19.29■□□□□ 0.68
MKS1-211ENST00000581761 ZNF521Q96K83 1311 aa19.28■□□□□ 0.68
MKS1-211ENST00000581761 XPCQ01831 940 aaPredicted RBP19.28■□□□□ 0.68
MKS1-211ENST00000581761 AATKQ6ZMQ8 1374 aa19.28■□□□□ 0.68
MKS1-211ENST00000581761 U2SURPO15042 1029 aaKnown RBP19.27■□□□□ 0.68
MKS1-211ENST00000581761 DIAPH1O60610 1272 aaKnown RBP19.27■□□□□ 0.68
MKS1-211ENST00000581761 POLKQ9UBT6 870 aa19.27■□□□□ 0.68
MKS1-211ENST00000581761 PNPLA6Q8IY17 1366 aa19.27■□□□□ 0.68
MKS1-211ENST00000581761 GOLGA2Q08379 1002 aa19.26■□□□□ 0.67
MKS1-211ENST00000581761 RGS17Q9UGC6 210 aaPredicted RBP19.26■□□□□ 0.67
MKS1-211ENST00000581761 PXDNQ92626 1479 aa19.26■□□□□ 0.67
MKS1-211ENST00000581761 NPHP3Q7Z494 1330 aa19.25■□□□□ 0.67
MKS1-211ENST00000581761 TTC21AQ8NDW8 1320 aa19.25■□□□□ 0.67
MKS1-211ENST00000581761 SSH2Q76I76 1423 aa19.25■□□□□ 0.67
MKS1-211ENST00000581761 FBLN1P23142 703 aa19.25■□□□□ 0.67
MKS1-211ENST00000581761 LRRC59Q96AG4 307 aaKnown RBP19.25■□□□□ 0.67
MKS1-211ENST00000581761 RNF123Q5XPI4 1314 aa19.25■□□□□ 0.67
MKS1-211ENST00000581761 PPM1GO15355 546 aaPredicted RBP19.24■□□□□ 0.67
MKS1-211ENST00000581761 ERICH6BQ5W0A0 696 aa19.24■□□□□ 0.67
MKS1-211ENST00000581761 OVOS2A0A0J9YW53 1432 aa19.24■□□□□ 0.67
MKS1-211ENST00000581761 OVOS2Q6IE36 1432 aa19.24■□□□□ 0.67
MKS1-211ENST00000581761 SPATA31A6Q5VVP1 1343 aa19.24■□□□□ 0.67
MKS1-211ENST00000581761 CDK12Q9NYV4 1490 aaPredicted RBP19.23■□□□□ 0.67
MKS1-211ENST00000581761 MEX3CQ5U5Q3 659 aaKnown RBP19.23■□□□□ 0.67
MKS1-211ENST00000581761 RCAN3Q9UKA8 241 aa19.23■□□□□ 0.67
MKS1-211ENST00000581761 EMILIN1Q9Y6C2 1016 aa19.23■□□□□ 0.67
MKS1-211ENST00000581761 MAP2P11137 1827 aaKnown RBP19.23■□□□□ 0.67
MKS1-211ENST00000581761 KIF1AQ12756 1690 aa19.22■□□□□ 0.67
MKS1-211ENST00000581761 KRT28Q7Z3Y7 464 aa19.22■□□□□ 0.67
MKS1-211ENST00000581761 TCP11L2Q8N4U5 519 aa19.22■□□□□ 0.67
MKS1-211ENST00000581761 SLFN5Q08AF3 891 aa19.21■□□□□ 0.67
MKS1-211ENST00000581761 RRP7AQ9Y3A4 280 aaKnown RBP19.21■□□□□ 0.67
MKS1-211ENST00000581761 NUTM2BA6NNL0 878 aaPredicted RBP19.2■□□□□ 0.66
MKS1-211ENST00000581761 NUTM2EB1AL46 878 aaPredicted RBP19.2■□□□□ 0.66
MKS1-211ENST00000581761 RRS1Q15050 365 aaKnown RBP19.2■□□□□ 0.66
MKS1-211ENST00000581761 NUTM2AQ8IVF1 878 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms