RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 ALS2Q96Q42 1657 aa22.14■■□□□ 1.13
CCDC57-213ENST00000581625 KTN1Q86UP2 1357 aaKnown RBP22.13■■□□□ 1.13
CCDC57-213ENST00000581625 COL22A1Q8NFW1 1626 aaPredicted RBP22.13■■□□□ 1.13
CCDC57-213ENST00000581625 SPATA31A3Q5VYP0 1347 aa22.13■■□□□ 1.13
CCDC57-213ENST00000581625 PNPLA6Q8IY17 1366 aa22.12■■□□□ 1.13
CCDC57-213ENST00000581625 CCDC7Q96M83 1385 aa22.12■■□□□ 1.13
CCDC57-213ENST00000581625 C11orf95C9JLR9 678 aaPredicted RBP22.12■■□□□ 1.13
CCDC57-213ENST00000581625 POLR3GLQ9BT43 218 aa22.12■■□□□ 1.13
CCDC57-213ENST00000581625 EDC4Q6P2E9 1401 aaKnown RBP22.12■■□□□ 1.13
CCDC57-213ENST00000581625 SSH2Q76I76 1423 aa22.12■■□□□ 1.13
CCDC57-213ENST00000581625 MED1Q15648 1581 aaPredicted RBP22.1■■□□□ 1.13
CCDC57-213ENST00000581625 TTC21AQ8NDW8 1320 aa22.09■■□□□ 1.13
CCDC57-213ENST00000581625 SPATA31A6Q5VVP1 1343 aa22.08■■□□□ 1.13
CCDC57-213ENST00000581625 WASHC2AQ641Q2 1341 aa22.08■■□□□ 1.13
CCDC57-213ENST00000581625 PAK3O75914 559 aaPredicted RBP22.08■■□□□ 1.13
CCDC57-213ENST00000581625 TTC21BQ7Z4L5 1316 aa22.06■■□□□ 1.12
CCDC57-213ENST00000581625 PIK3C2AO00443 1686 aa22.05■■□□□ 1.12
CCDC57-213ENST00000581625 LMOD2Q6P5Q4 547 aa22.04■■□□□ 1.12
CCDC57-213ENST00000581625 ABCA3Q99758 1704 aa22.03■■□□□ 1.12
CCDC57-213ENST00000581625 USP54Q70EL1 1684 aa22.02■■□□□ 1.12
CCDC57-213ENST00000581625 ABTB2Q8N961 1025 aa22.02■■□□□ 1.12
CCDC57-213ENST00000581625 NSD3Q9BZ95 1437 aa22.02■■□□□ 1.12
CCDC57-213ENST00000581625 CRYBG1Q9Y4K1 1723 aa22.01■■□□□ 1.11
CCDC57-213ENST00000581625 PHRF1Q9P1Y6 1649 aaKnown RBP22■■□□□ 1.11
CCDC57-213ENST00000581625 NLRP13Q86W25 1043 aa21.99■■□□□ 1.11
CCDC57-213ENST00000581625 USP19O94966 1318 aa21.99■■□□□ 1.11
CCDC57-213ENST00000581625 USP31Q70CQ4 1352 aa21.99■■□□□ 1.11
CCDC57-213ENST00000581625 SLIT3O75094 1523 aa21.98■■□□□ 1.11
CCDC57-213ENST00000581625 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.98■■□□□ 1.11
CCDC57-213ENST00000581625 PANK3Q9H999 370 aa21.98■■□□□ 1.11
CCDC57-213ENST00000581625 KIF20BQ96Q89 1820 aa21.97■■□□□ 1.11
CCDC57-213ENST00000581625 CARD14Q9BXL6 1004 aa21.97■■□□□ 1.11
CCDC57-213ENST00000581625 LRP6O75581 1613 aa21.97■■□□□ 1.11
CCDC57-213ENST00000581625 OVOS2A0A0J9YW53 1432 aa21.97■■□□□ 1.11
CCDC57-213ENST00000581625 OVOS2Q6IE36 1432 aa21.97■■□□□ 1.11
CCDC57-213ENST00000581625 NLRP6P59044 892 aa21.96■■□□□ 1.11
CCDC57-213ENST00000581625 CGNL1Q0VF96 1302 aa21.96■■□□□ 1.11
CCDC57-213ENST00000581625 MARF1Q9Y4F3 1742 aaKnown RBP21.95■■□□□ 1.1
CCDC57-213ENST00000581625 HAP1P54257 671 aaPredicted RBP21.95■■□□□ 1.1
CCDC57-213ENST00000581625 NME9Q86XW9 330 aa21.94■■□□□ 1.1
CCDC57-213ENST00000581625 NSD2O96028 1365 aa21.93■■□□□ 1.1
CCDC57-213ENST00000581625 NUTM2GQ5VZR2 741 aa21.93■■□□□ 1.1
CCDC57-213ENST00000581625 NUTM2BA6NNL0 878 aaPredicted RBP21.92■■□□□ 1.1
CCDC57-213ENST00000581625 NUTM2EB1AL46 878 aaPredicted RBP21.92■■□□□ 1.1
CCDC57-213ENST00000581625 NUTM2AQ8IVF1 878 aaPredicted RBP21.92■■□□□ 1.1
CCDC57-213ENST00000581625 KCNH5Q8NCM2 988 aa21.91■■□□□ 1.1
CCDC57-213ENST00000581625 CABLES1Q8TDN4 633 aa21.91■■□□□ 1.1
CCDC57-213ENST00000581625 KNSTRNQ9Y448 316 aa21.91■■□□□ 1.1
CCDC57-213ENST00000581625 ANKRD26Q9UPS8 1709 aa21.9■■□□□ 1.1
CCDC57-213ENST00000581625 ZNF316A6NFI3 1004 aaPredicted RBP21.9■■□□□ 1.1
CCDC57-213ENST00000581625 FYB1O15117 783 aa21.9■■□□□ 1.1
CCDC57-213ENST00000581625 COG3Q96JB2 828 aa21.9■■□□□ 1.1
CCDC57-213ENST00000581625 GCP02774 474 aa21.88■■□□□ 1.09
CCDC57-213ENST00000581625 MEX3CQ5U5Q3 659 aaKnown RBP21.88■■□□□ 1.09
CCDC57-213ENST00000581625 NFAT5O94916 1531 aa21.88■■□□□ 1.09
CCDC57-213ENST00000581625 CPDO75976 1380 aa21.87■■□□□ 1.09
CCDC57-213ENST00000581625 PLEKHG5O94827 1062 aa21.87■■□□□ 1.09
CCDC57-213ENST00000581625 PER1O15534 1290 aaPredicted RBP21.86■■□□□ 1.09
CCDC57-213ENST00000581625 ADAMTS2O95450 1211 aa21.86■■□□□ 1.09
CCDC57-213ENST00000581625 GGNBP2Q9H3C7 697 aa21.86■■□□□ 1.09
CCDC57-213ENST00000581625 ZRANB1Q9UGI0 708 aa21.86■■□□□ 1.09
CCDC57-213ENST00000581625 NPC1L1Q9UHC9 1359 aa21.86■■□□□ 1.09
CCDC57-213ENST00000581625 COL14A1Q05707 1796 aaKnown RBP21.85■■□□□ 1.09
CCDC57-213ENST00000581625 ABCC6O95255 1503 aa21.85■■□□□ 1.09
CCDC57-213ENST00000581625 KIAA0232Q92628 1395 aa21.84■■□□□ 1.09
CCDC57-213ENST00000581625 AMER1Q5JTC6 1135 aaPredicted RBP21.83■■□□□ 1.09
CCDC57-213ENST00000581625 C8orf37Q96NL8 207 aa21.82■■□□□ 1.08
CCDC57-213ENST00000581625 PRDM11Q9NQV5 511 aa21.82■■□□□ 1.08
CCDC57-213ENST00000581625 PLCH1Q4KWH8 1693 aa21.82■■□□□ 1.08
CCDC57-213ENST00000581625 NWD2Q9ULI1 1742 aa21.8■■□□□ 1.08
CCDC57-213ENST00000581625 ZC3H6P61129 1189 aaKnown RBP21.8■■□□□ 1.08
CCDC57-213ENST00000581625 SLIT2O94813 1529 aa21.8■■□□□ 1.08
CCDC57-213ENST00000581625 LMO7Q8WWI1 1683 aa21.79■■□□□ 1.08
CCDC57-213ENST00000581625 SOX12O15370 315 aa21.79■■□□□ 1.08
CCDC57-213ENST00000581625 DDX10Q13206 875 aaKnown RBP21.79■■□□□ 1.08
CCDC57-213ENST00000581625 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.78■■□□□ 1.08
CCDC57-213ENST00000581625 AATKQ6ZMQ8 1374 aa21.78■■□□□ 1.08
CCDC57-213ENST00000581625 ARHGEF25Q86VW2 580 aa21.78■■□□□ 1.08
CCDC57-213ENST00000581625 NGLY1Q96IV0 654 aa21.78■■□□□ 1.08
CCDC57-213ENST00000581625 LTN1O94822 1766 aa21.77■■□□□ 1.08
CCDC57-213ENST00000581625 FNBP4Q8N3X1 1017 aaPredicted RBP21.77■■□□□ 1.08
CCDC57-213ENST00000581625 PHF23Q9BUL5 403 aaPredicted RBP21.77■■□□□ 1.08
CCDC57-213ENST00000581625 RTL1A6NKG5 1358 aa21.76■■□□□ 1.07
CCDC57-213ENST00000581625 FAM83GA6ND36 823 aa21.76■■□□□ 1.07
CCDC57-213ENST00000581625 AFF2P51816 1311 aa21.76■■□□□ 1.07
CCDC57-213ENST00000581625 KIF24Q5T7B8 1368 aa21.75■■□□□ 1.07
CCDC57-213ENST00000581625 MORC1Q86VD1 984 aa21.75■■□□□ 1.07
CCDC57-213ENST00000581625 NRAPQ86VF7 1730 aa21.75■■□□□ 1.07
CCDC57-213ENST00000581625 COL18A1P39060 1754 aa21.74■■□□□ 1.07
CCDC57-213ENST00000581625 BLMP54132 1417 aaPredicted RBP21.73■■□□□ 1.07
CCDC57-213ENST00000581625 CHRNA2Q15822 529 aa21.73■■□□□ 1.07
CCDC57-213ENST00000581625 CC2D1BQ5T0F9 858 aaKnown RBP21.73■■□□□ 1.07
CCDC57-213ENST00000581625 ZNF772Q68DY9 489 aaPredicted RBP21.73■■□□□ 1.07
CCDC57-213ENST00000581625 MAP3K19Q56UN5 1328 aa21.73■■□□□ 1.07
CCDC57-213ENST00000581625 SMG6Q86US8 1419 aaKnown RBP21.72■■□□□ 1.07
CCDC57-213ENST00000581625 BCL9LQ86UU0 1499 aa21.72■■□□□ 1.07
CCDC57-213ENST00000581625 ZBTB7CA1YPR0 619 aa21.72■■□□□ 1.07
CCDC57-213ENST00000581625 USP21Q9UK80 565 aa21.72■■□□□ 1.07
CCDC57-213ENST00000581625 CAMTA1Q9Y6Y1 1673 aa21.72■■□□□ 1.07
CCDC57-213ENST00000581625 BTG4Q9NY30 223 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms