RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 RETREG3Q86VR2 466 aa7.12□□□□□ -1.27
DDX42-211ENST00000580108 NUTM1Q86Y26 1132 aa7.12□□□□□ -1.27
DDX42-211ENST00000580108 SOGA1O94964 1423 aa7.11□□□□□ -1.27
DDX42-211ENST00000580108 FDX1P10109 184 aa7.11□□□□□ -1.27
DDX42-211ENST00000580108 RC3H1Q5TC82 1133 aaKnown RBP7.11□□□□□ -1.27
DDX42-211ENST00000580108 KRI1Q8N9T8 703 aaKnown RBP7.11□□□□□ -1.27
DDX42-211ENST00000580108 ZC3H15Q8WU90 426 aaKnown RBP7.11□□□□□ -1.27
DDX42-211ENST00000580108 SPIRE2Q8WWL2 714 aa7.11□□□□□ -1.27
DDX42-211ENST00000580108 RIMBP3CA6NJZ7 1639 aa7.11□□□□□ -1.27
DDX42-211ENST00000580108 RIMBP3BA6NNM3 1639 aa7.11□□□□□ -1.27
DDX42-211ENST00000580108 RIMBP3Q9UFD9 1639 aa7.11□□□□□ -1.27
DDX42-211ENST00000580108 PBRM1Q86U86 1689 aa7.1□□□□□ -1.27
DDX42-211ENST00000580108 NDUFV2P19404 249 aa7.1□□□□□ -1.27
DDX42-211ENST00000580108 WNT7BP56706 349 aa7.1□□□□□ -1.27
DDX42-211ENST00000580108 AMHR2Q16671 573 aa7.1□□□□□ -1.27
DDX42-211ENST00000580108 HPS1Q92902 700 aa7.1□□□□□ -1.27
DDX42-211ENST00000580108 SYNJ1O43426 1573 aa7.1□□□□□ -1.27
DDX42-211ENST00000580108 MOXD2PA6NHM9 499 aa7.09□□□□□ -1.27
DDX42-211ENST00000580108 TTLL12Q14166 644 aaPredicted RBP7.09□□□□□ -1.27
DDX42-211ENST00000580108 TREML4Q6UXN2 200 aa7.09□□□□□ -1.27
DDX42-211ENST00000580108 NUDT12Q9BQG2 462 aa7.09□□□□□ -1.27
DDX42-211ENST00000580108 SNAPC4Q5SXM2 1469 aa7.09□□□□□ -1.27
DDX42-211ENST00000580108 C6orf229H3BNL8 230 aa7.08□□□□□ -1.28
DDX42-211ENST00000580108 GIGYF2Q6Y7W6 1299 aaKnown RBP7.08□□□□□ -1.28
DDX42-211ENST00000580108 ATP13A2Q9NQ11 1180 aa7.08□□□□□ -1.28
DDX42-211ENST00000580108 C11orf95C9JLR9 678 aaPredicted RBP7.07□□□□□ -1.28
DDX42-211ENST00000580108 BIVM-ERCC5R4GMW8 1640 aa7.07□□□□□ -1.28
DDX42-211ENST00000580108 ARHGEF11O15085 1522 aa7.06□□□□□ -1.28
DDX42-211ENST00000580108 ABCA5Q8WWZ7 1642 aa7.06□□□□□ -1.28
DDX42-211ENST00000580108 SIAH2O43255 324 aa7.06□□□□□ -1.28
DDX42-211ENST00000580108 CCNYL3P0C7X3 344 aa7.06□□□□□ -1.28
DDX42-211ENST00000580108 MS4A1P11836 297 aa7.06□□□□□ -1.28
DDX42-211ENST00000580108 ALDH1A1P00352 501 aa7.05□□□□□ -1.28
DDX42-211ENST00000580108 SNRPBP14678 240 aaKnown RBP7.05□□□□□ -1.28
DDX42-211ENST00000580108 SH3BP2P78314 561 aa7.05□□□□□ -1.28
DDX42-211ENST00000580108 PARP9Q8IXQ6 854 aa7.05□□□□□ -1.28
DDX42-211ENST00000580108 PRR7Q8TB68 274 aa7.05□□□□□ -1.28
DDX42-211ENST00000580108 BEGAINQ9BUH8 593 aa7.05□□□□□ -1.28
DDX42-211ENST00000580108 TOP2BQ02880 1626 aa7.05□□□□□ -1.28
DDX42-211ENST00000580108 PTPRNQ16849 979 aa7.04□□□□□ -1.28
DDX42-211ENST00000580108 LCE2CQ5TA81 110 aa7.04□□□□□ -1.28
DDX42-211ENST00000580108 GAPVD1Q14C86 1478 aa7.04□□□□□ -1.28
DDX42-211ENST00000580108 WRNQ14191 1432 aaPredicted RBP eCLIP7.03□□□□□ -1.28
DDX42-211ENST00000580108 CLASP1Q7Z460 1538 aa7.03□□□□□ -1.28
DDX42-211ENST00000580108 ABCA10Q8WWZ4 1543 aa7.03□□□□□ -1.28
DDX42-211ENST00000580108 NFX1Q12986 1120 aaKnown RBP7.03□□□□□ -1.28
DDX42-211ENST00000580108 TRIM47Q96LD4 638 aa7.03□□□□□ -1.28
DDX42-211ENST00000580108 TBC1D2Q9BYX2 928 aa7.03□□□□□ -1.28
DDX42-211ENST00000580108 UNC93B1Q9H1C4 597 aa7.03□□□□□ -1.28
DDX42-211ENST00000580108 GRIN2BQ13224 1484 aa7.03□□□□□ -1.28
DDX42-211ENST00000580108 TRIM66O15016 1216 aa7.02□□□□□ -1.29
DDX42-211ENST00000580108 MTMR2Q13614 643 aa7.02□□□□□ -1.29
DDX42-211ENST00000580108 LINC01559Q495D7 138 aa7.02□□□□□ -1.29
DDX42-211ENST00000580108 RSBN1LQ6PCB5 846 aaPredicted RBP7.02□□□□□ -1.29
DDX42-211ENST00000580108 EHBP1Q8NDI1 1231 aa7.02□□□□□ -1.29
DDX42-211ENST00000580108 EVA1BQ9NVM1 165 aa7.02□□□□□ -1.29
DDX42-211ENST00000580108 PCDHB15Q9Y5E8 787 aa7.02□□□□□ -1.29
DDX42-211ENST00000580108 ARAP1Q96P48 1450 aa7.02□□□□□ -1.29
DDX42-211ENST00000580108 ADAMTS12P58397 1594 aa7.01□□□□□ -1.29
DDX42-211ENST00000580108 MAGI1Q96QZ7 1491 aaPredicted RBP7.01□□□□□ -1.29
DDX42-211ENST00000580108 CFAP99D6REC4 459 aa7.01□□□□□ -1.29
DDX42-211ENST00000580108 WFS1O76024 890 aa7.01□□□□□ -1.29
DDX42-211ENST00000580108 KCNH2Q12809 1159 aa7.01□□□□□ -1.29
DDX42-211ENST00000580108 BAP1Q92560 729 aa7.01□□□□□ -1.29
DDX42-211ENST00000580108 ERCC6L2Q5T890 1561 aa7□□□□□ -1.29
DDX42-211ENST00000580108 DESI1Q6ICB0 168 aa7□□□□□ -1.29
DDX42-211ENST00000580108 TLL2Q9Y6L7 1015 aa7□□□□□ -1.29
DDX42-211ENST00000580108 SYNJ2O15056 1496 aa6.99□□□□□ -1.29
DDX42-211ENST00000580108 SPTLC1O15269 473 aa6.99□□□□□ -1.29
DDX42-211ENST00000580108 BMP1P13497 986 aa6.99□□□□□ -1.29
DDX42-211ENST00000580108 GJA5P36382 358 aa6.99□□□□□ -1.29
DDX42-211ENST00000580108 CYB5RLQ6IPT4 315 aa6.99□□□□□ -1.29
DDX42-211ENST00000580108 TRIM46Q7Z4K8 759 aa6.99□□□□□ -1.29
DDX42-211ENST00000580108 ZNF511Q8NB15 262 aa6.99□□□□□ -1.29
DDX42-211ENST00000580108 CHMP7Q8WUX9 453 aaPredicted RBP6.99□□□□□ -1.29
DDX42-211ENST00000580108 SENP2Q9HC62 589 aa6.99□□□□□ -1.29
DDX42-211ENST00000580108 CEP170Q5SW79 1584 aa6.99□□□□□ -1.29
DDX42-211ENST00000580108 SPDYE5A6NIY4 337 aa6.98□□□□□ -1.29
DDX42-211ENST00000580108 HRCP23327 699 aa6.97□□□□□ -1.29
DDX42-211ENST00000580108 LYPD8Q6UX82 237 aa6.97□□□□□ -1.29
DDX42-211ENST00000580108 CABLES1Q8TDN4 633 aa6.97□□□□□ -1.29
DDX42-211ENST00000580108 AK7Q96M32 723 aa6.97□□□□□ -1.29
DDX42-211ENST00000580108 WASF2Q9Y6W5 498 aa6.97□□□□□ -1.29
DDX42-211ENST00000580108 GRIN2AQ12879 1464 aa6.97□□□□□ -1.29
DDX42-211ENST00000580108 TERTO14746 1132 aaKnown RBP6.96□□□□□ -1.3
DDX42-211ENST00000580108 F12P00748 615 aaPredicted RBP6.96□□□□□ -1.3
DDX42-211ENST00000580108 MAP10Q9P2G4 905 aa6.96□□□□□ -1.3
DDX42-211ENST00000580108 CAPN5O15484 640 aaPredicted RBP6.95□□□□□ -1.3
DDX42-211ENST00000580108 RIC3Q7Z5B4 369 aa6.95□□□□□ -1.3
DDX42-211ENST00000580108 KIFC2Q96AC6 838 aa6.95□□□□□ -1.3
DDX42-211ENST00000580108 ZBTB3Q9H5J0 574 aa6.95□□□□□ -1.3
DDX42-211ENST00000580108 LIMD1Q9UGP4 676 aa6.95□□□□□ -1.3
DDX42-211ENST00000580108 PER1O15534 1290 aaPredicted RBP6.94□□□□□ -1.3
DDX42-211ENST00000580108 WIPF1O43516 503 aa6.94□□□□□ -1.3
DDX42-211ENST00000580108 CTHP32929 405 aa6.94□□□□□ -1.3
DDX42-211ENST00000580108 DIXDC1Q155Q3 683 aa6.94□□□□□ -1.3
DDX42-211ENST00000580108 QPCTQ16769 361 aa6.94□□□□□ -1.3
DDX42-211ENST00000580108 CSPP1Q1MSJ5 1256 aa6.94□□□□□ -1.3
DDX42-211ENST00000580108 FOXJ1Q92949 421 aa6.94□□□□□ -1.3
DDX42-211ENST00000580108 ERICH3Q5RHP9 1530 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms