RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 SOS2Q07890 1332 aaPredicted RBP21.87■■□□□ 1.09
CSNK1D-212ENST00000580061 PER1O15534 1290 aaPredicted RBP21.87■■□□□ 1.09
CSNK1D-212ENST00000580061 XPCQ01831 940 aaPredicted RBP21.87■■□□□ 1.09
CSNK1D-212ENST00000580061 KIF20BQ96Q89 1820 aa21.86■■□□□ 1.09
CSNK1D-212ENST00000580061 ALS2Q96Q42 1657 aa21.85■■□□□ 1.09
CSNK1D-212ENST00000580061 COL16A1Q07092 1604 aaPredicted RBP21.84■■□□□ 1.09
CSNK1D-212ENST00000580061 TTC21BQ7Z4L5 1316 aa21.84■■□□□ 1.09
CSNK1D-212ENST00000580061 PIK3C2AO00443 1686 aa21.84■■□□□ 1.09
CSNK1D-212ENST00000580061 SBNO1A3KN83 1393 aa21.84■■□□□ 1.09
CSNK1D-212ENST00000580061 TTC21AQ8NDW8 1320 aa21.82■■□□□ 1.08
CSNK1D-212ENST00000580061 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.82■■□□□ 1.08
CSNK1D-212ENST00000580061 KNSTRNQ9Y448 316 aa21.82■■□□□ 1.08
CSNK1D-212ENST00000580061 PAK3O75914 559 aaPredicted RBP21.81■■□□□ 1.08
CSNK1D-212ENST00000580061 TNS3Q68CZ2 1445 aa21.8■■□□□ 1.08
CSNK1D-212ENST00000580061 ANKRD26Q9UPS8 1709 aa21.8■■□□□ 1.08
CSNK1D-212ENST00000580061 CGNL1Q0VF96 1302 aa21.8■■□□□ 1.08
CSNK1D-212ENST00000580061 SPATA31A3Q5VYP0 1347 aa21.8■■□□□ 1.08
CSNK1D-212ENST00000580061 USP54Q70EL1 1684 aa21.79■■□□□ 1.08
CSNK1D-212ENST00000580061 MARF1Q9Y4F3 1742 aaKnown RBP21.79■■□□□ 1.08
CSNK1D-212ENST00000580061 AMER1Q5JTC6 1135 aaPredicted RBP21.78■■□□□ 1.08
CSNK1D-212ENST00000580061 FYB1O15117 783 aa21.77■■□□□ 1.08
CSNK1D-212ENST00000580061 NME9Q86XW9 330 aa21.77■■□□□ 1.08
CSNK1D-212ENST00000580061 ABTB2Q8N961 1025 aa21.77■■□□□ 1.08
CSNK1D-212ENST00000580061 NPC1L1Q9UHC9 1359 aa21.76■■□□□ 1.07
CSNK1D-212ENST00000580061 LRRC59Q96AG4 307 aaKnown RBP21.76■■□□□ 1.07
CSNK1D-212ENST00000580061 NSD2O96028 1365 aa21.75■■□□□ 1.07
CSNK1D-212ENST00000580061 USP31Q70CQ4 1352 aa21.75■■□□□ 1.07
CSNK1D-212ENST00000580061 FBXO41Q8TF61 875 aa21.75■■□□□ 1.07
CSNK1D-212ENST00000580061 ARHGEF10O15013 1369 aa21.74■■□□□ 1.07
CSNK1D-212ENST00000580061 OVOS2A0A0J9YW53 1432 aa21.74■■□□□ 1.07
CSNK1D-212ENST00000580061 OVOS2Q6IE36 1432 aa21.74■■□□□ 1.07
CSNK1D-212ENST00000580061 ZRANB1Q9UGI0 708 aa21.74■■□□□ 1.07
CSNK1D-212ENST00000580061 CRYBG1Q9Y4K1 1723 aa21.74■■□□□ 1.07
CSNK1D-212ENST00000580061 LMOD2Q6P5Q4 547 aa21.73■■□□□ 1.07
CSNK1D-212ENST00000580061 GGNBP2Q9H3C7 697 aa21.73■■□□□ 1.07
CSNK1D-212ENST00000580061 COL22A1Q8NFW1 1626 aaPredicted RBP21.73■■□□□ 1.07
CSNK1D-212ENST00000580061 SHPRHQ149N8 1683 aa21.72■■□□□ 1.07
CSNK1D-212ENST00000580061 HSPA1LP34931 641 aa21.72■■□□□ 1.07
CSNK1D-212ENST00000580061 NLRP6P59044 892 aa21.72■■□□□ 1.07
CSNK1D-212ENST00000580061 MED1Q15648 1581 aaPredicted RBP21.72■■□□□ 1.07
CSNK1D-212ENST00000580061 PHRF1Q9P1Y6 1649 aaKnown RBP21.71■■□□□ 1.07
CSNK1D-212ENST00000580061 CC2D1BQ5T0F9 858 aaKnown RBP21.71■■□□□ 1.07
CSNK1D-212ENST00000580061 NUTM2GQ5VZR2 741 aa21.71■■□□□ 1.07
CSNK1D-212ENST00000580061 NLRP13Q86W25 1043 aa21.71■■□□□ 1.07
CSNK1D-212ENST00000580061 ABCA3Q99758 1704 aa21.71■■□□□ 1.07
CSNK1D-212ENST00000580061 COG3Q96JB2 828 aa21.7■■□□□ 1.06
CSNK1D-212ENST00000580061 PNPLA6Q8IY17 1366 aa21.7■■□□□ 1.06
CSNK1D-212ENST00000580061 SLIT3O75094 1523 aa21.69■■□□□ 1.06
CSNK1D-212ENST00000580061 CNGB1Q14028 1251 aaPredicted RBP21.68■■□□□ 1.06
CSNK1D-212ENST00000580061 USP19O94966 1318 aa21.68■■□□□ 1.06
CSNK1D-212ENST00000580061 DIEXFQ68CQ4 756 aaKnown RBP21.67■■□□□ 1.06
CSNK1D-212ENST00000580061 JCADQ9P266 1359 aa21.66■■□□□ 1.06
CSNK1D-212ENST00000580061 MORC1Q86VD1 984 aa21.66■■□□□ 1.06
CSNK1D-212ENST00000580061 PARD3Q8TEW0 1356 aa21.64■■□□□ 1.06
CSNK1D-212ENST00000580061 MAP2P11137 1827 aaKnown RBP21.64■■□□□ 1.05
CSNK1D-212ENST00000580061 PLEKHG5O94827 1062 aa21.63■■□□□ 1.05
CSNK1D-212ENST00000580061 CABLES1Q8TDN4 633 aa21.63■■□□□ 1.05
CSNK1D-212ENST00000580061 NFAT5O94916 1531 aa21.63■■□□□ 1.05
CSNK1D-212ENST00000580061 KCNH5Q8NCM2 988 aa21.62■■□□□ 1.05
CSNK1D-212ENST00000580061 PRKRIP1Q9H875 184 aaPredicted RBP21.62■■□□□ 1.05
CSNK1D-212ENST00000580061 LTN1O94822 1766 aa21.61■■□□□ 1.05
CSNK1D-212ENST00000580061 GCP02774 474 aa21.61■■□□□ 1.05
CSNK1D-212ENST00000580061 ANP32CO43423 234 aa21.6■■□□□ 1.05
CSNK1D-212ENST00000580061 RALBP1Q15311 655 aa21.6■■□□□ 1.05
CSNK1D-212ENST00000580061 AATKQ6ZMQ8 1374 aa21.6■■□□□ 1.05
CSNK1D-212ENST00000580061 SOX12O15370 315 aa21.59■■□□□ 1.05
CSNK1D-212ENST00000580061 TNNT2P45379 298 aaPredicted RBP21.59■■□□□ 1.05
CSNK1D-212ENST00000580061 FBLN1P23142 703 aa21.58■■□□□ 1.05
CSNK1D-212ENST00000580061 SPATA31A6Q5VVP1 1343 aa21.56■■□□□ 1.04
CSNK1D-212ENST00000580061 HAP1P54257 671 aaPredicted RBP21.56■■□□□ 1.04
CSNK1D-212ENST00000580061 CPDO75976 1380 aa21.54■■□□□ 1.04
CSNK1D-212ENST00000580061 PPP2R1AP30153 589 aa21.54■■□□□ 1.04
CSNK1D-212ENST00000580061 PEAK1Q9H792 1746 aa21.54■■□□□ 1.04
CSNK1D-212ENST00000580061 ZC3H6P61129 1189 aaKnown RBP21.53■■□□□ 1.04
CSNK1D-212ENST00000580061 RRS1Q15050 365 aaKnown RBP21.53■■□□□ 1.04
CSNK1D-212ENST00000580061 ARHGEF25Q86VW2 580 aa21.53■■□□□ 1.04
CSNK1D-212ENST00000580061 POLKQ9UBT6 870 aa21.53■■□□□ 1.04
CSNK1D-212ENST00000580061 COL18A1P39060 1754 aa21.53■■□□□ 1.04
CSNK1D-212ENST00000580061 SMG6Q86US8 1419 aaKnown RBP21.53■■□□□ 1.04
CSNK1D-212ENST00000580061 MAP3K19Q56UN5 1328 aa21.53■■□□□ 1.04
CSNK1D-212ENST00000580061 MYBBP1AQ9BQG0 1328 aaKnown RBP21.53■■□□□ 1.04
CSNK1D-212ENST00000580061 KIAA0232Q92628 1395 aa21.52■■□□□ 1.04
CSNK1D-212ENST00000580061 NUTM2BA6NNL0 878 aaPredicted RBP21.52■■□□□ 1.04
CSNK1D-212ENST00000580061 NUTM2EB1AL46 878 aaPredicted RBP21.52■■□□□ 1.04
CSNK1D-212ENST00000580061 NUTM2AQ8IVF1 878 aaPredicted RBP21.52■■□□□ 1.04
CSNK1D-212ENST00000580061 LRP6O75581 1613 aa21.51■■□□□ 1.03
CSNK1D-212ENST00000580061 EMILIN1Q9Y6C2 1016 aa21.51■■□□□ 1.03
CSNK1D-212ENST00000580061 RGPD5Q99666 1765 aa21.51■■□□□ 1.03
CSNK1D-212ENST00000580061 KIF24Q5T7B8 1368 aa21.5■■□□□ 1.03
CSNK1D-212ENST00000580061 COL14A1Q05707 1796 aaKnown RBP21.5■■□□□ 1.03
CSNK1D-212ENST00000580061 MTHFSP49914 203 aa21.49■■□□□ 1.03
CSNK1D-212ENST00000580061 LMO7Q8WWI1 1683 aa21.49■■□□□ 1.03
CSNK1D-212ENST00000580061 ABCC6O95255 1503 aa21.49■■□□□ 1.03
CSNK1D-212ENST00000580061 CDK12Q9NYV4 1490 aaPredicted RBP21.48■■□□□ 1.03
CSNK1D-212ENST00000580061 ADAMTS2O95450 1211 aa21.48■■□□□ 1.03
CSNK1D-212ENST00000580061 RTL1A6NKG5 1358 aa21.48■■□□□ 1.03
CSNK1D-212ENST00000580061 ZBTB7CA1YPR0 619 aa21.47■■□□□ 1.03
CSNK1D-212ENST00000580061 AMPHP49418 695 aa21.47■■□□□ 1.03
CSNK1D-212ENST00000580061 PRDM11Q9NQV5 511 aa21.47■■□□□ 1.03
CSNK1D-212ENST00000580061 FLT4P35916 1363 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms