RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 SPATA31A1Q5TZJ5 1347 aa19.87■□□□□ 0.77
CDK5RAP3-213ENST00000579605 PAK3O75914 559 aaPredicted RBP19.87■□□□□ 0.77
CDK5RAP3-213ENST00000579605 CHRNA2Q15822 529 aa19.87■□□□□ 0.77
CDK5RAP3-213ENST00000579605 ZNF784Q8NCA9 323 aaPredicted RBP19.87■□□□□ 0.77
CDK5RAP3-213ENST00000579605 SIRT1Q96EB6 747 aa19.87■□□□□ 0.77
CDK5RAP3-213ENST00000579605 PRAM1Q96QH2 718 aa19.87■□□□□ 0.77
CDK5RAP3-213ENST00000579605 ADGRB2O60241 1585 aa19.87■□□□□ 0.77
CDK5RAP3-213ENST00000579605 RGPD8O14715 1765 aaPredicted RBP19.85■□□□□ 0.77
CDK5RAP3-213ENST00000579605 NINLQ9Y2I6 1382 aa19.85■□□□□ 0.77
CDK5RAP3-213ENST00000579605 GPRASP1Q5JY77 1395 aa19.84■□□□□ 0.77
CDK5RAP3-213ENST00000579605 POGKQ9P215 609 aa19.84■□□□□ 0.77
CDK5RAP3-213ENST00000579605 COL14A1Q05707 1796 aaKnown RBP19.84■□□□□ 0.77
CDK5RAP3-213ENST00000579605 THSD7AQ9UPZ6 1657 aa19.84■□□□□ 0.77
CDK5RAP3-213ENST00000579605 ANKRD30BQ9BXX2 1392 aa19.83■□□□□ 0.77
CDK5RAP3-213ENST00000579605 IFFO2Q5TF58 517 aa19.83■□□□□ 0.77
CDK5RAP3-213ENST00000579605 EVA1CP58658 441 aa19.82■□□□□ 0.76
CDK5RAP3-213ENST00000579605 HIRIP3Q9BW71 556 aaPredicted RBP19.82■□□□□ 0.76
CDK5RAP3-213ENST00000579605 ZC3H6P61129 1189 aaKnown RBP19.81■□□□□ 0.76
CDK5RAP3-213ENST00000579605 CFAP70Q5T0N1 1121 aa19.81■□□□□ 0.76
CDK5RAP3-213ENST00000579605 ACIN1Q9UKV3 1341 aaKnown RBP19.8■□□□□ 0.76
CDK5RAP3-213ENST00000579605 NGDNQ8NEJ9 315 aaKnown RBP19.8■□□□□ 0.76
CDK5RAP3-213ENST00000579605 DHX57Q6P158 1386 aaKnown RBP19.8■□□□□ 0.76
CDK5RAP3-213ENST00000579605 KIAA0232Q92628 1395 aa19.8■□□□□ 0.76
CDK5RAP3-213ENST00000579605 KNDC1Q76NI1 1749 aa19.79■□□□□ 0.76
CDK5RAP3-213ENST00000579605 C14orf93Q9H972 538 aaKnown RBP19.79■□□□□ 0.76
CDK5RAP3-213ENST00000579605 IFT172Q9UG01 1749 aa19.79■□□□□ 0.76
CDK5RAP3-213ENST00000579605 PIK3C2GO75747 1445 aa19.78■□□□□ 0.76
CDK5RAP3-213ENST00000579605 C1QTNF8P60827 252 aa19.78■□□□□ 0.76
CDK5RAP3-213ENST00000579605 CAMTA1Q9Y6Y1 1673 aa19.78■□□□□ 0.76
CDK5RAP3-213ENST00000579605 NUTM2GQ5VZR2 741 aa19.77■□□□□ 0.76
CDK5RAP3-213ENST00000579605 ANKARQ7Z5J8 1434 aa19.76■□□□□ 0.75
CDK5RAP3-213ENST00000579605 ZBTB7AO95365 584 aa19.76■□□□□ 0.75
CDK5RAP3-213ENST00000579605 SPATA31E1Q6ZUB1 1445 aa19.76■□□□□ 0.75
CDK5RAP3-213ENST00000579605 BARGINQ6ZT62 677 aa19.75■□□□□ 0.75
CDK5RAP3-213ENST00000579605 PDGFDQ9GZP0 370 aaPredicted RBP19.75■□□□□ 0.75
CDK5RAP3-213ENST00000579605 NUP188Q5SRE5 1749 aa19.75■□□□□ 0.75
CDK5RAP3-213ENST00000579605 MINK1Q8N4C8 1332 aaPredicted RBP19.75■□□□□ 0.75
CDK5RAP3-213ENST00000579605 PRR36Q9H6K5 1346 aa19.75■□□□□ 0.75
CDK5RAP3-213ENST00000579605 LARP1Q6PKG0 1096 aaKnown RBP19.74■□□□□ 0.75
CDK5RAP3-213ENST00000579605 ATF5Q9Y2D1 282 aaPredicted RBP19.74■□□□□ 0.75
CDK5RAP3-213ENST00000579605 RREB1Q92766 1687 aa19.74■□□□□ 0.75
CDK5RAP3-213ENST00000579605 ANO8Q9HCE9 1232 aaPredicted RBP19.73■□□□□ 0.75
CDK5RAP3-213ENST00000579605 TCP11L2Q8N4U5 519 aa19.72■□□□□ 0.75
CDK5RAP3-213ENST00000579605 TRPM3Q9HCF6 1732 aaPredicted RBP19.72■□□□□ 0.75
CDK5RAP3-213ENST00000579605 TRAK1Q9UPV9 953 aa19.72■□□□□ 0.75
CDK5RAP3-213ENST00000579605 BCL11BQ9C0K0 894 aaPredicted RBP19.71■□□□□ 0.75
CDK5RAP3-213ENST00000579605 ALS2Q96Q42 1657 aa19.7■□□□□ 0.74
CDK5RAP3-213ENST00000579605 SSH2Q76I76 1423 aa19.68■□□□□ 0.74
CDK5RAP3-213ENST00000579605 WASLO00401 505 aaPredicted RBP19.68■□□□□ 0.74
CDK5RAP3-213ENST00000579605 FHDC1Q9C0D6 1143 aaPredicted RBP19.68■□□□□ 0.74
CDK5RAP3-213ENST00000579605 PTGER2P43116 358 aa19.67■□□□□ 0.74
CDK5RAP3-213ENST00000579605 SYT17Q9BSW7 474 aa19.67■□□□□ 0.74
CDK5RAP3-213ENST00000579605 NRKQ7Z2Y5 1582 aa19.66■□□□□ 0.74
CDK5RAP3-213ENST00000579605 UTRNP46939 3433 aa19.66■□□□□ 0.74
CDK5RAP3-213ENST00000579605 PLSCR1O15162 318 aa19.65■□□□□ 0.74
CDK5RAP3-213ENST00000579605 PTF1AQ7RTS3 328 aa19.65■□□□□ 0.74
CDK5RAP3-213ENST00000579605 MPHOSPH9Q99550 1183 aa19.65■□□□□ 0.74
CDK5RAP3-213ENST00000579605 EIF3AQ14152 1382 aaKnown RBP19.64■□□□□ 0.73
CDK5RAP3-213ENST00000579605 ZBTB7CA1YPR0 619 aa19.63■□□□□ 0.73
CDK5RAP3-213ENST00000579605 THRAP3Q9Y2W1 955 aaKnown RBP19.63■□□□□ 0.73
CDK5RAP3-213ENST00000579605 C11orf95C9JLR9 678 aaPredicted RBP19.62■□□□□ 0.73
CDK5RAP3-213ENST00000579605 PROM2Q8N271 834 aa19.62■□□□□ 0.73
CDK5RAP3-213ENST00000579605 NUDT16Q96DE0 195 aaKnown RBP19.61■□□□□ 0.73
CDK5RAP3-213ENST00000579605 STK32BQ9NY57 414 aa19.61■□□□□ 0.73
CDK5RAP3-213ENST00000579605 CRYBG1Q9Y4K1 1723 aa19.61■□□□□ 0.73
CDK5RAP3-213ENST00000579605 TULP4Q9NRJ4 1543 aa19.61■□□□□ 0.73
CDK5RAP3-213ENST00000579605 GIGYF1O75420 1035 aaPredicted RBP19.59■□□□□ 0.73
CDK5RAP3-213ENST00000579605 ABTB2Q8N961 1025 aa19.59■□□□□ 0.73
CDK5RAP3-213ENST00000579605 DLC1Q96QB1 1528 aa19.59■□□□□ 0.73
CDK5RAP3-213ENST00000579605 OVOS2A0A0G2JMS6 1433 aa19.59■□□□□ 0.73
CDK5RAP3-213ENST00000579605 OVOS2A0A0J9YW53 1432 aa19.59■□□□□ 0.73
CDK5RAP3-213ENST00000579605 OVOS2Q6IE36 1432 aa19.59■□□□□ 0.73
CDK5RAP3-213ENST00000579605 DDB1Q16531 1140 aa19.58■□□□□ 0.72
CDK5RAP3-213ENST00000579605 MYOM1P52179 1685 aa19.58■□□□□ 0.72
CDK5RAP3-213ENST00000579605 GPR162Q16538 588 aa19.57■□□□□ 0.72
CDK5RAP3-213ENST00000579605 SLC15A2Q16348 729 aa19.56■□□□□ 0.72
CDK5RAP3-213ENST00000579605 PHRF1Q9P1Y6 1649 aaKnown RBP19.55■□□□□ 0.72
CDK5RAP3-213ENST00000579605 CASZ1Q86V15 1759 aa19.55■□□□□ 0.72
CDK5RAP3-213ENST00000579605 MTFR1LQ9H019 292 aa19.55■□□□□ 0.72
CDK5RAP3-213ENST00000579605 ACEP12821 1306 aa19.54■□□□□ 0.72
CDK5RAP3-213ENST00000579605 TXNRD1Q16881 649 aa19.54■□□□□ 0.72
CDK5RAP3-213ENST00000579605 ARXQ96QS3 562 aa19.54■□□□□ 0.72
CDK5RAP3-213ENST00000579605 KDM2AQ9Y2K7 1162 aa19.54■□□□□ 0.72
CDK5RAP3-213ENST00000579605 GCP02774 474 aa19.53■□□□□ 0.72
CDK5RAP3-213ENST00000579605 PELP1Q8IZL8 1130 aaKnown RBP19.53■□□□□ 0.72
CDK5RAP3-213ENST00000579605 ATP7BP35670 1465 aa19.53■□□□□ 0.72
CDK5RAP3-213ENST00000579605 TOM1L2Q6ZVM7 507 aa19.52■□□□□ 0.72
CDK5RAP3-213ENST00000579605 MARCH10Q8NA82 808 aaPredicted RBP19.52■□□□□ 0.72
CDK5RAP3-213ENST00000579605 SGIP1Q9BQI5 828 aa19.52■□□□□ 0.72
CDK5RAP3-213ENST00000579605 CDK19Q9BWU1 502 aa19.52■□□□□ 0.72
CDK5RAP3-213ENST00000579605 CPDO75976 1380 aa19.52■□□□□ 0.72
CDK5RAP3-213ENST00000579605 KLHL34Q8N239 644 aa19.51■□□□□ 0.71
CDK5RAP3-213ENST00000579605 CRB1P82279 1406 aa19.51■□□□□ 0.71
CDK5RAP3-213ENST00000579605 NLRP13Q86W25 1043 aa19.5■□□□□ 0.71
CDK5RAP3-213ENST00000579605 COL5A2P05997 1499 aaPredicted RBP19.49■□□□□ 0.71
CDK5RAP3-213ENST00000579605 ADGRB1O14514 1584 aa19.49■□□□□ 0.71
CDK5RAP3-213ENST00000579605 USP19O94966 1318 aa19.48■□□□□ 0.71
CDK5RAP3-213ENST00000579605 PARP4Q9UKK3 1724 aaKnown RBP19.48■□□□□ 0.71
CDK5RAP3-213ENST00000579605 CCDC61Q9Y6R9 512 aa19.47■□□□□ 0.71
CDK5RAP3-213ENST00000579605 PEAK1Q9H792 1746 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms