RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-208ENST00000579466 RGPD1P0DJD0 1748 aa14.18□□□□□ -0.14
MSI2-208ENST00000579466 PAK3O75914 559 aaPredicted RBP14.18□□□□□ -0.14
MSI2-208ENST00000579466 ITSN1Q15811 1721 aa14.18□□□□□ -0.14
MSI2-208ENST00000579466 ARHGEF28Q8N1W1 1705 aaKnown RBP14.18□□□□□ -0.14
MSI2-208ENST00000579466 LRP5O75197 1615 aa14.17□□□□□ -0.14
MSI2-208ENST00000579466 ACIN1Q9UKV3 1341 aaKnown RBP14.16□□□□□ -0.14
MSI2-208ENST00000579466 BAG6P46379 1132 aa14.16□□□□□ -0.14
MSI2-208ENST00000579466 NGDNQ8NEJ9 315 aaKnown RBP14.16□□□□□ -0.14
MSI2-208ENST00000579466 DCAF11Q8TEB1 546 aa14.16□□□□□ -0.14
MSI2-208ENST00000579466 EIF3AQ14152 1382 aaKnown RBP14.16□□□□□ -0.14
MSI2-208ENST00000579466 PHRF1Q9P1Y6 1649 aaKnown RBP14.15□□□□□ -0.14
MSI2-208ENST00000579466 ONECUT3O60422 494 aaPredicted RBP14.15□□□□□ -0.14
MSI2-208ENST00000579466 TNS1Q9HBL0 1735 aaKnown RBP14.15□□□□□ -0.14
MSI2-208ENST00000579466 THSD7AQ9UPZ6 1657 aa14.14□□□□□ -0.15
MSI2-208ENST00000579466 WASLO00401 505 aaPredicted RBP14.14□□□□□ -0.15
MSI2-208ENST00000579466 PRDM11Q9NQV5 511 aa14.14□□□□□ -0.15
MSI2-208ENST00000579466 EN1Q05925 392 aaPredicted RBP14.13□□□□□ -0.15
MSI2-208ENST00000579466 NUTM2GQ5VZR2 741 aa14.13□□□□□ -0.15
MSI2-208ENST00000579466 ATP7BP35670 1465 aa14.12□□□□□ -0.15
MSI2-208ENST00000579466 CHRNA2Q15822 529 aa14.12□□□□□ -0.15
MSI2-208ENST00000579466 STRN4Q9NRL3 753 aa14.12□□□□□ -0.15
MSI2-208ENST00000579466 SPATA31A5Q5VU36 1347 aa14.12□□□□□ -0.15
MSI2-208ENST00000579466 SPATA31A7Q8IWB4 1347 aa14.12□□□□□ -0.15
MSI2-208ENST00000579466 KIAA0232Q92628 1395 aa14.11□□□□□ -0.15
MSI2-208ENST00000579466 TOPAZ1Q8N9V7 1692 aa14.1□□□□□ -0.15
MSI2-208ENST00000579466 ZC3H6P61129 1189 aaKnown RBP14.1□□□□□ -0.15
MSI2-208ENST00000579466 USP35Q9P2H5 1018 aa14.1□□□□□ -0.15
MSI2-208ENST00000579466 HRCP23327 699 aa14.09□□□□□ -0.15
MSI2-208ENST00000579466 R3HDM1Q15032 1099 aaKnown RBP14.09□□□□□ -0.15
MSI2-208ENST00000579466 NUDT16Q96DE0 195 aaKnown RBP14.09□□□□□ -0.15
MSI2-208ENST00000579466 NRKQ7Z2Y5 1582 aa14.08□□□□□ -0.16
MSI2-208ENST00000579466 TRIM37O94972 964 aa14.07□□□□□ -0.16
MSI2-208ENST00000579466 EZH2Q15910 746 aaKnown RBP14.07□□□□□ -0.16
MSI2-208ENST00000579466 SPATA31A1Q5TZJ5 1347 aa14.07□□□□□ -0.16
MSI2-208ENST00000579466 CDK19Q9BWU1 502 aa14.06□□□□□ -0.16
MSI2-208ENST00000579466 ZBTB7CA1YPR0 619 aa14.04□□□□□ -0.16
MSI2-208ENST00000579466 ACEP12821 1306 aa14.04□□□□□ -0.16
MSI2-208ENST00000579466 SSH2Q76I76 1423 aa14.04□□□□□ -0.16
MSI2-208ENST00000579466 EVA1CP58658 441 aa14.03□□□□□ -0.16
MSI2-208ENST00000579466 DISP2A7MBM2 1401 aa14.03□□□□□ -0.16
MSI2-208ENST00000579466 NUP188Q5SRE5 1749 aa14.02□□□□□ -0.16
MSI2-208ENST00000579466 KIAA1210Q9ULL0 1709 aa14.02□□□□□ -0.16
MSI2-208ENST00000579466 RREB1Q92766 1687 aa14.02□□□□□ -0.16
MSI2-208ENST00000579466 CAMTA1Q9Y6Y1 1673 aa14.02□□□□□ -0.16
MSI2-208ENST00000579466 APBA3O96018 575 aa14.02□□□□□ -0.17
MSI2-208ENST00000579466 ABTB2Q8N961 1025 aa14.02□□□□□ -0.17
MSI2-208ENST00000579466 LMO7Q8WWI1 1683 aa14.01□□□□□ -0.17
MSI2-208ENST00000579466 POLR3AO14802 1390 aaPredicted RBP14.01□□□□□ -0.17
MSI2-208ENST00000579466 PDE3BQ13370 1112 aa14.01□□□□□ -0.17
MSI2-208ENST00000579466 NBPF8Q3BBV2 869 aa14.01□□□□□ -0.17
MSI2-208ENST00000579466 LARP1Q6PKG0 1096 aaKnown RBP14.01□□□□□ -0.17
MSI2-208ENST00000579466 FAM196AQ6ZSG2 479 aa14.01□□□□□ -0.17
MSI2-208ENST00000579466 QRICH2Q9H0J4 1663 aa14.01□□□□□ -0.17
MSI2-208ENST00000579466 SRPK2P78362 688 aaKnown RBP14□□□□□ -0.17
MSI2-208ENST00000579466 CCDC61Q9Y6R9 512 aa14□□□□□ -0.17
MSI2-208ENST00000579466 PPIP5K1Q6PFW1 1433 aa13.99□□□□□ -0.17
MSI2-208ENST00000579466 NBPF1Q3BBV0 1214 aa13.99□□□□□ -0.17
MSI2-208ENST00000579466 STAC3Q96MF2 364 aa13.99□□□□□ -0.17
MSI2-208ENST00000579466 CAMKK2Q96RR4 588 aa13.99□□□□□ -0.17
MSI2-208ENST00000579466 CABP2Q9NPB3 220 aa13.98□□□□□ -0.17
MSI2-208ENST00000579466 TCP11L2Q8N4U5 519 aa13.97□□□□□ -0.17
MSI2-208ENST00000579466 PARP4Q9UKK3 1724 aaKnown RBP13.97□□□□□ -0.17
MSI2-208ENST00000579466 USP19O94966 1318 aa13.96□□□□□ -0.17
MSI2-208ENST00000579466 COL5A2P05997 1499 aaPredicted RBP13.96□□□□□ -0.17
MSI2-208ENST00000579466 PLEKHG3A1L390 1219 aa13.96□□□□□ -0.17
MSI2-208ENST00000579466 BARGINQ6ZT62 677 aa13.96□□□□□ -0.17
MSI2-208ENST00000579466 LRRC37A3O60309 1634 aa13.96□□□□□ -0.17
MSI2-208ENST00000579466 CENPJQ9HC77 1338 aaPredicted RBP13.95□□□□□ -0.18
MSI2-208ENST00000579466 NLRP13Q86W25 1043 aa13.95□□□□□ -0.18
MSI2-208ENST00000579466 CPDO75976 1380 aa13.95□□□□□ -0.18
MSI2-208ENST00000579466 PARD3Q8TEW0 1356 aa13.95□□□□□ -0.18
MSI2-208ENST00000579466 WNK3Q9BYP7 1800 aa13.94□□□□□ -0.18
MSI2-208ENST00000579466 GCP02774 474 aa13.94□□□□□ -0.18
MSI2-208ENST00000579466 SBF2Q86WG5 1849 aa13.93□□□□□ -0.18
MSI2-208ENST00000579466 PIK3C2AO00443 1686 aa13.93□□□□□ -0.18
MSI2-208ENST00000579466 RGPD5Q99666 1765 aa13.93□□□□□ -0.18
MSI2-208ENST00000579466 CRB1P82279 1406 aa13.92□□□□□ -0.18
MSI2-208ENST00000579466 NLRP6P59044 892 aa13.92□□□□□ -0.18
MSI2-208ENST00000579466 NBPF14Q5TI25 921 aa13.92□□□□□ -0.18
MSI2-208ENST00000579466 PEAK1Q9H792 1746 aa13.92□□□□□ -0.18
MSI2-208ENST00000579466 AKAP12Q02952 1782 aa13.91□□□□□ -0.18
MSI2-208ENST00000579466 USP6P35125 1406 aa13.91□□□□□ -0.18
MSI2-208ENST00000579466 SOX12O15370 315 aa13.91□□□□□ -0.18
MSI2-208ENST00000579466 CABP1Q9NZU7 370 aa13.91□□□□□ -0.18
MSI2-208ENST00000579466 OVOS2A0A0G2JMS6 1433 aa13.9□□□□□ -0.18
MSI2-208ENST00000579466 OVOS2A0A0J9YW53 1432 aa13.9□□□□□ -0.18
MSI2-208ENST00000579466 OVOS2Q6IE36 1432 aa13.9□□□□□ -0.18
MSI2-208ENST00000579466 SLIT3O75094 1523 aa13.9□□□□□ -0.18
MSI2-208ENST00000579466 TOM1L2Q6ZVM7 507 aa13.9□□□□□ -0.18
MSI2-208ENST00000579466 PPP1R1BQ9UD71 204 aaPredicted RBP13.9□□□□□ -0.18
MSI2-208ENST00000579466 THRAP3Q9Y2W1 955 aaKnown RBP13.9□□□□□ -0.18
MSI2-208ENST00000579466 COL18A1P39060 1754 aa13.89□□□□□ -0.19
MSI2-208ENST00000579466 DDB1Q16531 1140 aa13.88□□□□□ -0.19
MSI2-208ENST00000579466 TRPM1Q7Z4N2 1603 aa13.88□□□□□ -0.19
MSI2-208ENST00000579466 RGPD3A6NKT7 1758 aaPredicted RBP13.88□□□□□ -0.19
MSI2-208ENST00000579466 RGPD4Q7Z3J3 1758 aa13.88□□□□□ -0.19
MSI2-208ENST00000579466 PTF1AQ7RTS3 328 aa13.87□□□□□ -0.19
MSI2-208ENST00000579466 AATKQ6ZMQ8 1374 aa13.86□□□□□ -0.19
MSI2-208ENST00000579466 CSB-PGBD3P0DP91 1061 aa13.86□□□□□ -0.19
MSI2-208ENST00000579466 SPON1Q9HCB6 807 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms