RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 MON2Q7Z3U7 1717 aa19.05■□□□□ 0.64
CSNK1D-209ENST00000578904 KTN1Q86UP2 1357 aaKnown RBP19.05■□□□□ 0.64
CSNK1D-209ENST00000578904 SOS2Q07890 1332 aaPredicted RBP19.04■□□□□ 0.64
CSNK1D-209ENST00000578904 ZNF692Q9BU19 519 aaPredicted RBP19.04■□□□□ 0.64
CSNK1D-209ENST00000578904 TRPM3Q9HCF6 1732 aaPredicted RBP19.03■□□□□ 0.64
CSNK1D-209ENST00000578904 NRKQ7Z2Y5 1582 aa19.03■□□□□ 0.64
CSNK1D-209ENST00000578904 PANK3Q9H999 370 aa19.03■□□□□ 0.64
CSNK1D-209ENST00000578904 SBNO1A3KN83 1393 aa19.02■□□□□ 0.64
CSNK1D-209ENST00000578904 BRD4O60885 1362 aaPredicted RBP19.02■□□□□ 0.64
CSNK1D-209ENST00000578904 TNS3Q68CZ2 1445 aa19.01■□□□□ 0.63
CSNK1D-209ENST00000578904 PAK3O75914 559 aaPredicted RBP19.01■□□□□ 0.63
CSNK1D-209ENST00000578904 KNSTRNQ9Y448 316 aa19.01■□□□□ 0.63
CSNK1D-209ENST00000578904 EDC4Q6P2E9 1401 aaKnown RBP19■□□□□ 0.63
CSNK1D-209ENST00000578904 LRRC59Q96AG4 307 aaKnown RBP18.99■□□□□ 0.63
CSNK1D-209ENST00000578904 NSD3Q9BZ95 1437 aa18.99■□□□□ 0.63
CSNK1D-209ENST00000578904 SPATA31A3Q5VYP0 1347 aa18.99■□□□□ 0.63
CSNK1D-209ENST00000578904 SSH2Q76I76 1423 aa18.98■□□□□ 0.63
CSNK1D-209ENST00000578904 ALS2Q96Q42 1657 aa18.98■□□□□ 0.63
CSNK1D-209ENST00000578904 ARHGEF10O15013 1369 aa18.97■□□□□ 0.63
CSNK1D-209ENST00000578904 LMOD2Q6P5Q4 547 aa18.97■□□□□ 0.63
CSNK1D-209ENST00000578904 TTC21BQ7Z4L5 1316 aa18.97■□□□□ 0.63
CSNK1D-209ENST00000578904 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.96■□□□□ 0.63
CSNK1D-209ENST00000578904 MIER1Q8N108 512 aa18.96■□□□□ 0.63
CSNK1D-209ENST00000578904 TTC21AQ8NDW8 1320 aa18.96■□□□□ 0.63
CSNK1D-209ENST00000578904 JCADQ9P266 1359 aa18.95■□□□□ 0.62
CSNK1D-209ENST00000578904 PIK3C2AO00443 1686 aa18.95■□□□□ 0.62
CSNK1D-209ENST00000578904 SHPRHQ149N8 1683 aa18.95■□□□□ 0.62
CSNK1D-209ENST00000578904 PNPLA6Q8IY17 1366 aa18.94■□□□□ 0.62
CSNK1D-209ENST00000578904 RALBP1Q15311 655 aa18.94■□□□□ 0.62
CSNK1D-209ENST00000578904 CARD14Q9BXL6 1004 aa18.94■□□□□ 0.62
CSNK1D-209ENST00000578904 PER1O15534 1290 aaPredicted RBP18.93■□□□□ 0.62
CSNK1D-209ENST00000578904 ABTB2Q8N961 1025 aa18.93■□□□□ 0.62
CSNK1D-209ENST00000578904 RGS17Q9UGC6 210 aaPredicted RBP18.93■□□□□ 0.62
CSNK1D-209ENST00000578904 NPC1L1Q9UHC9 1359 aa18.93■□□□□ 0.62
CSNK1D-209ENST00000578904 KIF20BQ96Q89 1820 aa18.92■□□□□ 0.62
CSNK1D-209ENST00000578904 COL22A1Q8NFW1 1626 aaPredicted RBP18.92■□□□□ 0.62
CSNK1D-209ENST00000578904 CCER2I3L3R5 266 aa18.91■□□□□ 0.62
CSNK1D-209ENST00000578904 NUTM2GQ5VZR2 741 aa18.91■□□□□ 0.62
CSNK1D-209ENST00000578904 NME9Q86XW9 330 aa18.91■□□□□ 0.62
CSNK1D-209ENST00000578904 PRKRIP1Q9H875 184 aaPredicted RBP18.91■□□□□ 0.62
CSNK1D-209ENST00000578904 PLEKHG5O94827 1062 aa18.9■□□□□ 0.62
CSNK1D-209ENST00000578904 CGNL1Q0VF96 1302 aa18.9■□□□□ 0.62
CSNK1D-209ENST00000578904 NLRP6P59044 892 aa18.89■□□□□ 0.61
CSNK1D-209ENST00000578904 NLRP13Q86W25 1043 aa18.88■□□□□ 0.61
CSNK1D-209ENST00000578904 NSD2O96028 1365 aa18.88■□□□□ 0.61
CSNK1D-209ENST00000578904 USP54Q70EL1 1684 aa18.88■□□□□ 0.61
CSNK1D-209ENST00000578904 ABCA3Q99758 1704 aa18.88■□□□□ 0.61
CSNK1D-209ENST00000578904 OVOS2A0A0J9YW53 1432 aa18.87■□□□□ 0.61
CSNK1D-209ENST00000578904 OVOS2Q6IE36 1432 aa18.87■□□□□ 0.61
CSNK1D-209ENST00000578904 USP31Q70CQ4 1352 aa18.87■□□□□ 0.61
CSNK1D-209ENST00000578904 PHRF1Q9P1Y6 1649 aaKnown RBP18.87■□□□□ 0.61
CSNK1D-209ENST00000578904 CRYBG1Q9Y4K1 1723 aa18.86■□□□□ 0.61
CSNK1D-209ENST00000578904 USP19O94966 1318 aa18.86■□□□□ 0.61
CSNK1D-209ENST00000578904 SPATA31A6Q5VVP1 1343 aa18.86■□□□□ 0.61
CSNK1D-209ENST00000578904 HAP1P54257 671 aaPredicted RBP18.86■□□□□ 0.61
CSNK1D-209ENST00000578904 ZRANB1Q9UGI0 708 aa18.86■□□□□ 0.61
CSNK1D-209ENST00000578904 MARF1Q9Y4F3 1742 aaKnown RBP18.86■□□□□ 0.61
CSNK1D-209ENST00000578904 SLIT3O75094 1523 aa18.85■□□□□ 0.61
CSNK1D-209ENST00000578904 FYB1O15117 783 aa18.85■□□□□ 0.61
CSNK1D-209ENST00000578904 CC2D1BQ5T0F9 858 aaKnown RBP18.85■□□□□ 0.61
CSNK1D-209ENST00000578904 CABLES1Q8TDN4 633 aa18.85■□□□□ 0.61
CSNK1D-209ENST00000578904 COG3Q96JB2 828 aa18.85■□□□□ 0.61
CSNK1D-209ENST00000578904 GGNBP2Q9H3C7 697 aa18.85■□□□□ 0.61
CSNK1D-209ENST00000578904 ANKRD26Q9UPS8 1709 aa18.84■□□□□ 0.61
CSNK1D-209ENST00000578904 NUTM2BA6NNL0 878 aaPredicted RBP18.84■□□□□ 0.61
CSNK1D-209ENST00000578904 NUTM2EB1AL46 878 aaPredicted RBP18.84■□□□□ 0.61
CSNK1D-209ENST00000578904 AMER1Q5JTC6 1135 aaPredicted RBP18.84■□□□□ 0.61
CSNK1D-209ENST00000578904 NUTM2AQ8IVF1 878 aaPredicted RBP18.84■□□□□ 0.61
CSNK1D-209ENST00000578904 MYBBP1AQ9BQG0 1328 aaKnown RBP18.83■□□□□ 0.61
CSNK1D-209ENST00000578904 PARD3Q8TEW0 1356 aa18.82■□□□□ 0.6
CSNK1D-209ENST00000578904 CNGB1Q14028 1251 aaPredicted RBP18.82■□□□□ 0.6
CSNK1D-209ENST00000578904 LRP6O75581 1613 aa18.82■□□□□ 0.6
CSNK1D-209ENST00000578904 SOX12O15370 315 aa18.81■□□□□ 0.6
CSNK1D-209ENST00000578904 KCNH5Q8NCM2 988 aa18.8■□□□□ 0.6
CSNK1D-209ENST00000578904 GCP02774 474 aa18.79■□□□□ 0.6
CSNK1D-209ENST00000578904 POTEAQ6S8J7 498 aa18.79■□□□□ 0.6
CSNK1D-209ENST00000578904 MORC1Q86VD1 984 aa18.79■□□□□ 0.6
CSNK1D-209ENST00000578904 NFAT5O94916 1531 aa18.79■□□□□ 0.6
CSNK1D-209ENST00000578904 ADAMTS2O95450 1211 aa18.78■□□□□ 0.6
CSNK1D-209ENST00000578904 MEX3CQ5U5Q3 659 aaKnown RBP18.77■□□□□ 0.6
CSNK1D-209ENST00000578904 ZC3H6P61129 1189 aaKnown RBP18.76■□□□□ 0.59
CSNK1D-209ENST00000578904 ZBTB7CA1YPR0 619 aa18.75■□□□□ 0.59
CSNK1D-209ENST00000578904 MRS2Q9HD23 443 aa18.75■□□□□ 0.59
CSNK1D-209ENST00000578904 KIAA0232Q92628 1395 aa18.75■□□□□ 0.59
CSNK1D-209ENST00000578904 CPDO75976 1380 aa18.74■□□□□ 0.59
CSNK1D-209ENST00000578904 TNNT2P45379 298 aaPredicted RBP18.74■□□□□ 0.59
CSNK1D-209ENST00000578904 PRDM11Q9NQV5 511 aa18.74■□□□□ 0.59
CSNK1D-209ENST00000578904 LTN1O94822 1766 aa18.72■□□□□ 0.59
CSNK1D-209ENST00000578904 COL14A1Q05707 1796 aaKnown RBP18.72■□□□□ 0.59
CSNK1D-209ENST00000578904 AATKQ6ZMQ8 1374 aa18.71■□□□□ 0.59
CSNK1D-209ENST00000578904 C8orf37Q96NL8 207 aa18.71■□□□□ 0.59
CSNK1D-209ENST00000578904 PLCH1Q4KWH8 1693 aa18.7■□□□□ 0.58
CSNK1D-209ENST00000578904 FBLN1P23142 703 aa18.7■□□□□ 0.58
CSNK1D-209ENST00000578904 PPP2R1AP30153 589 aa18.7■□□□□ 0.58
CSNK1D-209ENST00000578904 RRS1Q15050 365 aaKnown RBP18.7■□□□□ 0.58
CSNK1D-209ENST00000578904 CHRNA2Q15822 529 aa18.7■□□□□ 0.58
CSNK1D-209ENST00000578904 ARHGEF25Q86VW2 580 aa18.7■□□□□ 0.58
CSNK1D-209ENST00000578904 MAP3K19Q56UN5 1328 aa18.7■□□□□ 0.58
CSNK1D-209ENST00000578904 ABCC6O95255 1503 aa18.69■□□□□ 0.58
CSNK1D-209ENST00000578904 FAM83GA6ND36 823 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms