RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 CDCA8Q53HL2 280 aa21.86■■□□□ 1.09
LITAF-218ENST00000576036 TMC1Q8TDI8 760 aa21.85■■□□□ 1.09
LITAF-218ENST00000576036 JCADQ9P266 1359 aa21.85■■□□□ 1.09
LITAF-218ENST00000576036 MED1Q15648 1581 aaPredicted RBP21.84■■□□□ 1.09
LITAF-218ENST00000576036 USP54Q70EL1 1684 aa21.84■■□□□ 1.09
LITAF-218ENST00000576036 LRRC59Q96AG4 307 aaKnown RBP21.83■■□□□ 1.09
LITAF-218ENST00000576036 ANKRD36BQ8N2N9 1353 aa21.83■■□□□ 1.08
LITAF-218ENST00000576036 CCDC7Q96M83 1385 aa21.83■■□□□ 1.08
LITAF-218ENST00000576036 WASHC2AQ641Q2 1341 aa21.82■■□□□ 1.08
LITAF-218ENST00000576036 LRP6O75581 1613 aa21.82■■□□□ 1.08
LITAF-218ENST00000576036 PHRF1Q9P1Y6 1649 aaKnown RBP21.82■■□□□ 1.08
LITAF-218ENST00000576036 KTN1Q86UP2 1357 aaKnown RBP21.82■■□□□ 1.08
LITAF-218ENST00000576036 BRD4O60885 1362 aaPredicted RBP21.8■■□□□ 1.08
LITAF-218ENST00000576036 KIF20BQ96Q89 1820 aa21.8■■□□□ 1.08
LITAF-218ENST00000576036 ZNF692Q9BU19 519 aaPredicted RBP21.79■■□□□ 1.08
LITAF-218ENST00000576036 EDC4Q6P2E9 1401 aaKnown RBP21.79■■□□□ 1.08
LITAF-218ENST00000576036 POLR3GLQ9BT43 218 aa21.78■■□□□ 1.08
LITAF-218ENST00000576036 TTC21BQ7Z4L5 1316 aa21.78■■□□□ 1.08
LITAF-218ENST00000576036 ARHGEF10O15013 1369 aa21.77■■□□□ 1.08
LITAF-218ENST00000576036 CARD14Q9BXL6 1004 aa21.77■■□□□ 1.08
LITAF-218ENST00000576036 TERF2IPQ9NYB0 399 aa21.76■■□□□ 1.07
LITAF-218ENST00000576036 PAK3O75914 559 aaPredicted RBP21.75■■□□□ 1.07
LITAF-218ENST00000576036 HDGFL2Q7Z4V5 671 aaPredicted RBP21.75■■□□□ 1.07
LITAF-218ENST00000576036 SLIT3O75094 1523 aa21.74■■□□□ 1.07
LITAF-218ENST00000576036 SPATA31A6Q5VVP1 1343 aa21.73■■□□□ 1.07
LITAF-218ENST00000576036 TTC21AQ8NDW8 1320 aa21.73■■□□□ 1.07
LITAF-218ENST00000576036 NSD3Q9BZ95 1437 aa21.72■■□□□ 1.07
LITAF-218ENST00000576036 ANKRD26Q9UPS8 1709 aa21.72■■□□□ 1.07
LITAF-218ENST00000576036 NUTM2GQ5VZR2 741 aa21.71■■□□□ 1.07
LITAF-218ENST00000576036 LMOD2Q6P5Q4 547 aa21.71■■□□□ 1.07
LITAF-218ENST00000576036 CABLES1Q8TDN4 633 aa21.71■■□□□ 1.07
LITAF-218ENST00000576036 ZRANB1Q9UGI0 708 aa21.71■■□□□ 1.07
LITAF-218ENST00000576036 USP19O94966 1318 aa21.71■■□□□ 1.07
LITAF-218ENST00000576036 NME9Q86XW9 330 aa21.7■■□□□ 1.06
LITAF-218ENST00000576036 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.7■■□□□ 1.06
LITAF-218ENST00000576036 USP31Q70CQ4 1352 aa21.7■■□□□ 1.06
LITAF-218ENST00000576036 OVOS2A0A0J9YW53 1432 aa21.7■■□□□ 1.06
LITAF-218ENST00000576036 OVOS2Q6IE36 1432 aa21.7■■□□□ 1.06
LITAF-218ENST00000576036 ABTB2Q8N961 1025 aa21.69■■□□□ 1.06
LITAF-218ENST00000576036 PANK3Q9H999 370 aa21.69■■□□□ 1.06
LITAF-218ENST00000576036 NFAT5O94916 1531 aa21.68■■□□□ 1.06
LITAF-218ENST00000576036 NUTM2BA6NNL0 878 aaPredicted RBP21.67■■□□□ 1.06
LITAF-218ENST00000576036 NUTM2EB1AL46 878 aaPredicted RBP21.67■■□□□ 1.06
LITAF-218ENST00000576036 NUTM2AQ8IVF1 878 aaPredicted RBP21.67■■□□□ 1.06
LITAF-218ENST00000576036 PLCH1Q4KWH8 1693 aa21.66■■□□□ 1.06
LITAF-218ENST00000576036 PLEKHG5O94827 1062 aa21.66■■□□□ 1.06
LITAF-218ENST00000576036 LTN1O94822 1766 aa21.64■■□□□ 1.06
LITAF-218ENST00000576036 COL18A1P39060 1754 aa21.64■■□□□ 1.06
LITAF-218ENST00000576036 FYB1O15117 783 aa21.64■■□□□ 1.05
LITAF-218ENST00000576036 NLRP6P59044 892 aa21.64■■□□□ 1.05
LITAF-218ENST00000576036 NLRP13Q86W25 1043 aa21.63■■□□□ 1.05
LITAF-218ENST00000576036 PER1O15534 1290 aaPredicted RBP21.62■■□□□ 1.05
LITAF-218ENST00000576036 LMO7Q8WWI1 1683 aa21.62■■□□□ 1.05
LITAF-218ENST00000576036 COL14A1Q05707 1796 aaKnown RBP21.61■■□□□ 1.05
LITAF-218ENST00000576036 RGPD5Q99666 1765 aa21.61■■□□□ 1.05
LITAF-218ENST00000576036 NRAPQ86VF7 1730 aa21.61■■□□□ 1.05
LITAF-218ENST00000576036 NWD2Q9ULI1 1742 aa21.6■■□□□ 1.05
LITAF-218ENST00000576036 ADAMTS2O95450 1211 aa21.6■■□□□ 1.05
LITAF-218ENST00000576036 GCP02774 474 aa21.59■■□□□ 1.05
LITAF-218ENST00000576036 GGNBP2Q9H3C7 697 aa21.59■■□□□ 1.05
LITAF-218ENST00000576036 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.58■■□□□ 1.05
LITAF-218ENST00000576036 SLIT2O94813 1529 aa21.57■■□□□ 1.04
LITAF-218ENST00000576036 AMER1Q5JTC6 1135 aaPredicted RBP21.57■■□□□ 1.04
LITAF-218ENST00000576036 CPDO75976 1380 aa21.57■■□□□ 1.04
LITAF-218ENST00000576036 KIAA0232Q92628 1395 aa21.57■■□□□ 1.04
LITAF-218ENST00000576036 MAP2P11137 1827 aaKnown RBP21.57■■□□□ 1.04
LITAF-218ENST00000576036 CGNL1Q0VF96 1302 aa21.56■■□□□ 1.04
LITAF-218ENST00000576036 PEAK1Q9H792 1746 aa21.55■■□□□ 1.04
LITAF-218ENST00000576036 ZNF316A6NFI3 1004 aaPredicted RBP21.55■■□□□ 1.04
LITAF-218ENST00000576036 FAM83GA6ND36 823 aa21.54■■□□□ 1.04
LITAF-218ENST00000576036 ZC3H6P61129 1189 aaKnown RBP21.54■■□□□ 1.04
LITAF-218ENST00000576036 RGS17Q9UGC6 210 aaPredicted RBP21.54■■□□□ 1.04
LITAF-218ENST00000576036 HAP1P54257 671 aaPredicted RBP21.53■■□□□ 1.04
LITAF-218ENST00000576036 COG3Q96JB2 828 aa21.53■■□□□ 1.04
LITAF-218ENST00000576036 C8orf37Q96NL8 207 aa21.53■■□□□ 1.04
LITAF-218ENST00000576036 CAMTA1Q9Y6Y1 1673 aa21.53■■□□□ 1.04
LITAF-218ENST00000576036 BCL9LQ86UU0 1499 aa21.52■■□□□ 1.04
LITAF-218ENST00000576036 NSD2O96028 1365 aa21.52■■□□□ 1.04
LITAF-218ENST00000576036 SOX12O15370 315 aa21.52■■□□□ 1.04
LITAF-218ENST00000576036 FBLN1P23142 703 aa21.52■■□□□ 1.04
LITAF-218ENST00000576036 MEX3CQ5U5Q3 659 aaKnown RBP21.52■■□□□ 1.04
LITAF-218ENST00000576036 KNSTRNQ9Y448 316 aa21.52■■□□□ 1.04
LITAF-218ENST00000576036 NPC1L1Q9UHC9 1359 aa21.51■■□□□ 1.03
LITAF-218ENST00000576036 ABCC6O95255 1503 aa21.51■■□□□ 1.03
LITAF-218ENST00000576036 CHRNA2Q15822 529 aa21.51■■□□□ 1.03
LITAF-218ENST00000576036 ARHGEF25Q86VW2 580 aa21.51■■□□□ 1.03
LITAF-218ENST00000576036 FNBP4Q8N3X1 1017 aaPredicted RBP21.51■■□□□ 1.03
LITAF-218ENST00000576036 AFF2P51816 1311 aa21.51■■□□□ 1.03
LITAF-218ENST00000576036 DDX10Q13206 875 aaKnown RBP21.5■■□□□ 1.03
LITAF-218ENST00000576036 KCNH5Q8NCM2 988 aa21.5■■□□□ 1.03
LITAF-218ENST00000576036 PRDM11Q9NQV5 511 aa21.49■■□□□ 1.03
LITAF-218ENST00000576036 NGLY1Q96IV0 654 aa21.48■■□□□ 1.03
LITAF-218ENST00000576036 AATKQ6ZMQ8 1374 aa21.48■■□□□ 1.03
LITAF-218ENST00000576036 MAP3K19Q56UN5 1328 aa21.46■■□□□ 1.03
LITAF-218ENST00000576036 AXIN2Q9Y2T1 843 aa21.45■■□□□ 1.02
LITAF-218ENST00000576036 RGPD2P0DJD1 1756 aa21.45■■□□□ 1.02
LITAF-218ENST00000576036 ATRNO75882 1429 aa21.45■■□□□ 1.02
LITAF-218ENST00000576036 COL5A2P05997 1499 aaPredicted RBP21.45■■□□□ 1.02
LITAF-218ENST00000576036 RRS1Q15050 365 aaKnown RBP21.44■■□□□ 1.02
LITAF-218ENST00000576036 PHF23Q9BUL5 403 aaPredicted RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms