RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 TSC1Q92574 1164 aa8.23□□□□□ -1.09
PRPF8-211ENST00000574728 THAP11Q96EK4 314 aa8.23□□□□□ -1.09
PRPF8-211ENST00000574728 TIMELESSQ9UNS1 1208 aa8.23□□□□□ -1.09
PRPF8-211ENST00000574728 SYNJ2O15056 1496 aa8.23□□□□□ -1.09
PRPF8-211ENST00000574728 CFAP99D6REC4 459 aa8.22□□□□□ -1.09
PRPF8-211ENST00000574728 MCM6Q14566 821 aa8.22□□□□□ -1.09
PRPF8-211ENST00000574728 TJAP1Q5JTD0 557 aa8.22□□□□□ -1.09
PRPF8-211ENST00000574728 SPSB2Q99619 263 aa8.22□□□□□ -1.09
PRPF8-211ENST00000574728 CHD1O14646 1710 aa8.21□□□□□ -1.09
PRPF8-211ENST00000574728 CLASP1Q7Z460 1538 aa8.21□□□□□ -1.1
PRPF8-211ENST00000574728 DESI1Q6ICB0 168 aa8.21□□□□□ -1.1
PRPF8-211ENST00000574728 ADAMTS12P58397 1594 aa8.2□□□□□ -1.1
PRPF8-211ENST00000574728 APBB1O00213 710 aa8.2□□□□□ -1.1
PRPF8-211ENST00000574728 ADH1BP00325 375 aa8.2□□□□□ -1.1
PRPF8-211ENST00000574728 USP17L8P0C7I0 530 aa8.2□□□□□ -1.1
PRPF8-211ENST00000574728 PBRM1Q86U86 1689 aa8.2□□□□□ -1.1
PRPF8-211ENST00000574728 IGF1RP08069 1367 aa8.2□□□□□ -1.1
PRPF8-211ENST00000574728 ERICH3Q5RHP9 1530 aa8.19□□□□□ -1.1
PRPF8-211ENST00000574728 TLL1O43897 1013 aa8.19□□□□□ -1.1
PRPF8-211ENST00000574728 UBTFP17480 764 aaKnown RBP8.19□□□□□ -1.1
PRPF8-211ENST00000574728 CTDSPL2Q05D32 466 aa8.19□□□□□ -1.1
PRPF8-211ENST00000574728 MMRN1Q13201 1228 aa8.19□□□□□ -1.1
PRPF8-211ENST00000574728 MSS51Q4VC12 460 aa8.19□□□□□ -1.1
PRPF8-211ENST00000574728 SNRKQ9NRH2 765 aa8.19□□□□□ -1.1
PRPF8-211ENST00000574728 ARHGEF11O15085 1522 aa8.19□□□□□ -1.1
PRPF8-211ENST00000574728 SOCS7O14512 581 aa8.18□□□□□ -1.1
PRPF8-211ENST00000574728 CHMP7Q8WUX9 453 aaPredicted RBP8.18□□□□□ -1.1
PRPF8-211ENST00000574728 ZNF516Q92618 1163 aa8.18□□□□□ -1.1
PRPF8-211ENST00000574728 FHAD1B1AJZ9 1412 aa8.18□□□□□ -1.1
PRPF8-211ENST00000574728 NUP160Q12769 1436 aa8.18□□□□□ -1.1
PRPF8-211ENST00000574728 GRIN2AQ12879 1464 aa8.18□□□□□ -1.1
PRPF8-211ENST00000574728 JUNDP17535 347 aa8.17□□□□□ -1.1
PRPF8-211ENST00000574728 RIMBP3CA6NJZ7 1639 aa8.17□□□□□ -1.1
PRPF8-211ENST00000574728 RIMBP3BA6NNM3 1639 aa8.17□□□□□ -1.1
PRPF8-211ENST00000574728 RIMBP3Q9UFD9 1639 aa8.17□□□□□ -1.1
PRPF8-211ENST00000574728 KCNC4Q03721 635 aa8.16□□□□□ -1.1
PRPF8-211ENST00000574728 FAM160A2Q8N612 972 aaPredicted RBP8.16□□□□□ -1.1
PRPF8-211ENST00000574728 MTMR14Q8NCE2 650 aa8.16□□□□□ -1.1
PRPF8-211ENST00000574728 PRM3Q9NNZ6 103 aa8.16□□□□□ -1.1
PRPF8-211ENST00000574728 CEP170Q5SW79 1584 aa8.15□□□□□ -1.1
PRPF8-211ENST00000574728 RAD21O60216 631 aa8.15□□□□□ -1.1
PRPF8-211ENST00000574728 ITGBL1O95965 494 aaPredicted RBP8.15□□□□□ -1.1
PRPF8-211ENST00000574728 LYPD8Q6UX82 237 aa8.15□□□□□ -1.1
PRPF8-211ENST00000574728 LRRN4Q8WUT4 740 aa8.15□□□□□ -1.1
PRPF8-211ENST00000574728 SLC6A16Q9GZN6 736 aa8.15□□□□□ -1.1
PRPF8-211ENST00000574728 RUSC2Q8N2Y8 1516 aa8.14□□□□□ -1.11
PRPF8-211ENST00000574728 ARAP1Q96P48 1450 aa8.14□□□□□ -1.11
PRPF8-211ENST00000574728 KIF27Q86VH2 1401 aa8.14□□□□□ -1.11
PRPF8-211ENST00000574728 PER1O15534 1290 aaPredicted RBP8.14□□□□□ -1.11
PRPF8-211ENST00000574728 DXOO77932 396 aaKnown RBP8.14□□□□□ -1.11
PRPF8-211ENST00000574728 MMP16P51512 607 aa8.14□□□□□ -1.11
PRPF8-211ENST00000574728 PTPRNQ16849 979 aa8.14□□□□□ -1.11
PRPF8-211ENST00000574728 ZMYND15Q9H091 742 aa8.14□□□□□ -1.11
PRPF8-211ENST00000574728 PRDM9Q9NQV7 894 aa8.13□□□□□ -1.11
PRPF8-211ENST00000574728 NKX2-3Q8TAU0 364 aa8.12□□□□□ -1.11
PRPF8-211ENST00000574728 HMX1Q9NP08 348 aaPredicted RBP8.12□□□□□ -1.11
PRPF8-211ENST00000574728 ERCC6L2Q5T890 1561 aa8.11□□□□□ -1.11
PRPF8-211ENST00000574728 CLUAP1Q96AJ1 413 aa8.11□□□□□ -1.11
PRPF8-211ENST00000574728 GJD4Q96KN9 370 aaPredicted RBP8.11□□□□□ -1.11
PRPF8-211ENST00000574728 NUDT12Q9BQG2 462 aa8.11□□□□□ -1.11
PRPF8-211ENST00000574728 COG6Q9Y2V7 657 aa8.11□□□□□ -1.11
PRPF8-211ENST00000574728 NDUFB9Q9Y6M9 179 aa8.11□□□□□ -1.11
PRPF8-211ENST00000574728 SHROOM2Q13796 1616 aa8.11□□□□□ -1.11
PRPF8-211ENST00000574728 A6NJR5 290 aa8.1□□□□□ -1.11
PRPF8-211ENST00000574728 S1PR4O95977 384 aa8.1□□□□□ -1.11
PRPF8-211ENST00000574728 CCNYL3P0C7X3 344 aa8.1□□□□□ -1.11
PRPF8-211ENST00000574728 PNMA1Q8ND90 353 aa8.1□□□□□ -1.11
PRPF8-211ENST00000574728 CTHP32929 405 aa8.09□□□□□ -1.11
PRPF8-211ENST00000574728 GGCXP38435 758 aa8.09□□□□□ -1.11
PRPF8-211ENST00000574728 NR6A1Q15406 480 aa8.09□□□□□ -1.11
PRPF8-211ENST00000574728 POM121Q96HA1 1249 aa8.09□□□□□ -1.11
PRPF8-211ENST00000574728 TRIM34Q9BYJ4 488 aa8.09□□□□□ -1.11
PRPF8-211ENST00000574728 CARMIL1Q5VZK9 1371 aa8.09□□□□□ -1.12
PRPF8-211ENST00000574728 F12P00748 615 aaPredicted RBP8.08□□□□□ -1.12
PRPF8-211ENST00000574728 WWC1Q8IX03 1113 aa8.08□□□□□ -1.12
PRPF8-211ENST00000574728 CCDC24Q8N4L8 307 aa8.08□□□□□ -1.12
PRPF8-211ENST00000574728 GDPD2Q9HCC8 539 aa8.08□□□□□ -1.12
PRPF8-211ENST00000574728 EVA1BQ9NVM1 165 aa8.08□□□□□ -1.12
PRPF8-211ENST00000574728 TBC1D2BQ9UPU7 963 aa8.08□□□□□ -1.12
PRPF8-211ENST00000574728 KCNH2Q12809 1159 aa8.07□□□□□ -1.12
PRPF8-211ENST00000574728 CYB5RLQ6IPT4 315 aa8.07□□□□□ -1.12
PRPF8-211ENST00000574728 PROSER2Q86WR7 435 aaPredicted RBP8.07□□□□□ -1.12
PRPF8-211ENST00000574728 EPS8L1Q8TE68 723 aa8.07□□□□□ -1.12
PRPF8-211ENST00000574728 MAP10Q9P2G4 905 aa8.07□□□□□ -1.12
PRPF8-211ENST00000574728 CUL7Q14999 1698 aa8.07□□□□□ -1.12
PRPF8-211ENST00000574728 ABL2P42684 1182 aa8.06□□□□□ -1.12
PRPF8-211ENST00000574728 FCF1Q9Y324 198 aaKnown RBP8.06□□□□□ -1.12
PRPF8-211ENST00000574728 KIAA0586Q9BVV6 1533 aa8.06□□□□□ -1.12
PRPF8-211ENST00000574728 PRXQ9BXM0 1461 aa8.06□□□□□ -1.12
PRPF8-211ENST00000574728 ARMC2Q8NEN0 867 aa8.05□□□□□ -1.12
PRPF8-211ENST00000574728 PRG4Q92954 1404 aaPredicted RBP8.04□□□□□ -1.12
PRPF8-211ENST00000574728 IFFO2Q5TF58 517 aa8.04□□□□□ -1.12
PRPF8-211ENST00000574728 ZC3H4Q9UPT8 1303 aaKnown RBP8.03□□□□□ -1.12
PRPF8-211ENST00000574728 RNF223E7ERA6 249 aa8.03□□□□□ -1.12
PRPF8-211ENST00000574728 TRAK2O60296 914 aa8.03□□□□□ -1.12
PRPF8-211ENST00000574728 ANKLE1Q8NAG6 615 aa8.03□□□□□ -1.12
PRPF8-211ENST00000574728 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.03□□□□□ -1.12
PRPF8-211ENST00000574728 FKBPLQ9UIM3 349 aa8.03□□□□□ -1.12
PRPF8-211ENST00000574728 RAPGEF2Q9Y4G8 1499 aa8.02□□□□□ -1.13
PRPF8-211ENST00000574728 PPEF1O14829 653 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms