RNA–Protein interactions for RNA: ENST00000574544.1

ABR-229, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5

Gene ABR, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-229ENST00000574544 PRDM11Q9NQV5 511 aa12.55□□□□□ -0.4
ABR-229ENST00000574544 BTG4Q9NY30 223 aa12.55□□□□□ -0.4
ABR-229ENST00000574544 TULP4Q9NRJ4 1543 aa12.55□□□□□ -0.4
ABR-229ENST00000574544 PPIP5K1Q6PFW1 1433 aa12.54□□□□□ -0.4
ABR-229ENST00000574544 RGPD8O14715 1765 aaPredicted RBP12.53□□□□□ -0.4
ABR-229ENST00000574544 SOX12O15370 315 aa12.53□□□□□ -0.4
ABR-229ENST00000574544 SLC12A5Q9H2X9 1139 aa12.53□□□□□ -0.4
ABR-229ENST00000574544 STRN4Q9NRL3 753 aa12.53□□□□□ -0.4
ABR-229ENST00000574544 TIMELESSQ9UNS1 1208 aa12.53□□□□□ -0.4
ABR-229ENST00000574544 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.52□□□□□ -0.41
ABR-229ENST00000574544 ATP7BP35670 1465 aa12.51□□□□□ -0.41
ABR-229ENST00000574544 KIF1AQ12756 1690 aa12.51□□□□□ -0.41
ABR-229ENST00000574544 KIAA1210Q9ULL0 1709 aa12.51□□□□□ -0.41
ABR-229ENST00000574544 GCP02774 474 aa12.5□□□□□ -0.41
ABR-229ENST00000574544 HDGFL2Q7Z4V5 671 aaPredicted RBP12.5□□□□□ -0.41
ABR-229ENST00000574544 UPF1Q92900 1129 aaKnown RBP eCLIP12.5□□□□□ -0.41
ABR-229ENST00000574544 POLR3GLQ9BT43 218 aa12.5□□□□□ -0.41
ABR-229ENST00000574544 USP35Q9P2H5 1018 aa12.5□□□□□ -0.41
ABR-229ENST00000574544 CLSPNQ9HAW4 1339 aa12.5□□□□□ -0.41
ABR-229ENST00000574544 POLR3AO14802 1390 aaPredicted RBP12.5□□□□□ -0.41
ABR-229ENST00000574544 ADGRB2O60241 1585 aa12.5□□□□□ -0.41
ABR-229ENST00000574544 USP32Q8NFA0 1604 aa12.5□□□□□ -0.41
ABR-229ENST00000574544 ARHGEF28Q8N1W1 1705 aaKnown RBP12.5□□□□□ -0.41
ABR-229ENST00000574544 BCL9LQ86UU0 1499 aa12.49□□□□□ -0.41
ABR-229ENST00000574544 SLC24A1O60721 1099 aa12.49□□□□□ -0.41
ABR-229ENST00000574544 VPS72Q15906 364 aa12.49□□□□□ -0.41
ABR-229ENST00000574544 TTC21BQ7Z4L5 1316 aa12.48□□□□□ -0.41
ABR-229ENST00000574544 TMF1P82094 1093 aa12.48□□□□□ -0.41
ABR-229ENST00000574544 SEPT12Q8IYM1 358 aa12.48□□□□□ -0.41
ABR-229ENST00000574544 TERF2IPQ9NYB0 399 aa12.48□□□□□ -0.41
ABR-229ENST00000574544 ATAD2Q6PL18 1390 aa12.47□□□□□ -0.41
ABR-229ENST00000574544 KTN1Q86UP2 1357 aaKnown RBP12.47□□□□□ -0.41
ABR-229ENST00000574544 KIAA0232Q92628 1395 aa12.47□□□□□ -0.41
ABR-229ENST00000574544 FAM98CQ17RN3 349 aaKnown RBP12.47□□□□□ -0.41
ABR-229ENST00000574544 TRPM1Q7Z4N2 1603 aa12.47□□□□□ -0.41
ABR-229ENST00000574544 TESK2Q96S53 571 aa12.46□□□□□ -0.41
ABR-229ENST00000574544 ZRANB1Q9UGI0 708 aa12.46□□□□□ -0.41
ABR-229ENST00000574544 ATRNO75882 1429 aa12.45□□□□□ -0.42
ABR-229ENST00000574544 RALGAPBQ86X10 1494 aa12.45□□□□□ -0.42
ABR-229ENST00000574544 NME9Q86XW9 330 aa12.44□□□□□ -0.42
ABR-229ENST00000574544 COL22A1Q8NFW1 1626 aaPredicted RBP12.44□□□□□ -0.42
ABR-229ENST00000574544 SLIT2O94813 1529 aa12.43□□□□□ -0.42
ABR-229ENST00000574544 CSB-PGBD3P0DP91 1061 aa12.43□□□□□ -0.42
ABR-229ENST00000574544 CDCA8Q53HL2 280 aa12.43□□□□□ -0.42
ABR-229ENST00000574544 KCNH5Q8NCM2 988 aa12.43□□□□□ -0.42
ABR-229ENST00000574544 PUS7Q96PZ0 661 aaKnown RBP12.43□□□□□ -0.42
ABR-229ENST00000574544 RGS12O14924 1447 aa12.43□□□□□ -0.42
ABR-229ENST00000574544 USP6P35125 1406 aa12.43□□□□□ -0.42
ABR-229ENST00000574544 USP47Q96K76 1375 aa12.43□□□□□ -0.42
ABR-229ENST00000574544 TTC21AQ8NDW8 1320 aa12.42□□□□□ -0.42
ABR-229ENST00000574544 QRICH2Q9H0J4 1663 aa12.42□□□□□ -0.42
ABR-229ENST00000574544 LARP1Q6PKG0 1096 aaKnown RBP12.42□□□□□ -0.42
ABR-229ENST00000574544 KRT27Q7Z3Y8 459 aa12.42□□□□□ -0.42
ABR-229ENST00000574544 BRD4O60885 1362 aaPredicted RBP12.42□□□□□ -0.42
ABR-229ENST00000574544 ONECUT3O60422 494 aaPredicted RBP12.41□□□□□ -0.42
ABR-229ENST00000574544 EIF4G2P78344 907 aaKnown RBP eCLIP12.41□□□□□ -0.42
ABR-229ENST00000574544 SF3B2Q13435 895 aaKnown RBP12.41□□□□□ -0.42
ABR-229ENST00000574544 FAM182BQ5T319 152 aa12.41□□□□□ -0.42
ABR-229ENST00000574544 TOM1L2Q6ZVM7 507 aa12.41□□□□□ -0.42
ABR-229ENST00000574544 SPATA31A5Q5VU36 1347 aa12.4□□□□□ -0.42
ABR-229ENST00000574544 SPATA31A7Q8IWB4 1347 aa12.4□□□□□ -0.42
ABR-229ENST00000574544 SBNO2Q9Y2G9 1366 aa12.4□□□□□ -0.42
ABR-229ENST00000574544 CDK12Q9NYV4 1490 aaPredicted RBP12.4□□□□□ -0.43
ABR-229ENST00000574544 USP19O94966 1318 aa12.39□□□□□ -0.43
ABR-229ENST00000574544 HSPA5P11021 654 aaKnown RBP12.39□□□□□ -0.43
ABR-229ENST00000574544 PDE3BQ13370 1112 aa12.39□□□□□ -0.43
ABR-229ENST00000574544 AXIN2Q9Y2T1 843 aa12.39□□□□□ -0.43
ABR-229ENST00000574544 ARHGEF25Q86VW2 580 aa12.38□□□□□ -0.43
ABR-229ENST00000574544 TCP11L2Q8N4U5 519 aa12.38□□□□□ -0.43
ABR-229ENST00000574544 COG3Q96JB2 828 aa12.38□□□□□ -0.43
ABR-229ENST00000574544 SPATA31A1Q5TZJ5 1347 aa12.37□□□□□ -0.43
ABR-229ENST00000574544 CPSF1Q10570 1443 aaKnown RBP12.37□□□□□ -0.43
ABR-229ENST00000574544 ITSN1Q15811 1721 aa12.37□□□□□ -0.43
ABR-229ENST00000574544 TRPM3Q9HCF6 1732 aaPredicted RBP12.37□□□□□ -0.43
ABR-229ENST00000574544 FBLN1P23142 703 aa12.37□□□□□ -0.43
ABR-229ENST00000574544 CCDC125Q86Z20 511 aa12.37□□□□□ -0.43
ABR-229ENST00000574544 LTV1Q96GA3 475 aaPredicted RBP12.37□□□□□ -0.43
ABR-229ENST00000574544 GGNBP2Q9H3C7 697 aa12.37□□□□□ -0.43
ABR-229ENST00000574544 SSH2Q76I76 1423 aa12.36□□□□□ -0.43
ABR-229ENST00000574544 A0A1W2PP64 1363 aa12.35□□□□□ -0.43
ABR-229ENST00000574544 CPDO75976 1380 aa12.35□□□□□ -0.43
ABR-229ENST00000574544 AMPHP49418 695 aa12.35□□□□□ -0.43
ABR-229ENST00000574544 NLRP2Q9NX02 1062 aa12.35□□□□□ -0.43
ABR-229ENST00000574544 ALS2Q96Q42 1657 aa12.35□□□□□ -0.43
ABR-229ENST00000574544 DEFB132Q7Z7B7 95 aa12.34□□□□□ -0.43
ABR-229ENST00000574544 AATKQ6ZMQ8 1374 aa12.33□□□□□ -0.44
ABR-229ENST00000574544 FYB1O15117 783 aa12.33□□□□□ -0.44
ABR-229ENST00000574544 BARGINQ6ZT62 677 aa12.33□□□□□ -0.44
ABR-229ENST00000574544 THRAP3Q9Y2W1 955 aaKnown RBP12.33□□□□□ -0.44
ABR-229ENST00000574544 TOPAZ1Q8N9V7 1692 aa12.32□□□□□ -0.44
ABR-229ENST00000574544 CAMTA1Q9Y6Y1 1673 aa12.32□□□□□ -0.44
ABR-229ENST00000574544 USP31Q70CQ4 1352 aa12.31□□□□□ -0.44
ABR-229ENST00000574544 MARF1Q9Y4F3 1742 aaKnown RBP12.31□□□□□ -0.44
ABR-229ENST00000574544 GLI3P10071 1580 aa12.31□□□□□ -0.44
ABR-229ENST00000574544 COL14A1Q05707 1796 aaKnown RBP12.31□□□□□ -0.44
ABR-229ENST00000574544 EDC4Q6P2E9 1401 aaKnown RBP12.31□□□□□ -0.44
ABR-229ENST00000574544 EXOC5O00471 708 aa12.31□□□□□ -0.44
ABR-229ENST00000574544 TRIM37O94972 964 aa12.31□□□□□ -0.44
ABR-229ENST00000574544 DDB1Q16531 1140 aa12.31□□□□□ -0.44
ABR-229ENST00000574544 FAM196AQ6ZSG2 479 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms