RNA–Protein interactions for RNA: ENST00000574257.5

ABR-226, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-226ENST00000574257 CCDC125Q86Z20 511 aa17.08■□□□□ 0.32
ABR-226ENST00000574257 NBPF8Q3BBV2 869 aa17.06■□□□□ 0.32
ABR-226ENST00000574257 L3MBTL2Q969R5 705 aa17.06■□□□□ 0.32
ABR-226ENST00000574257 CCDC61Q9Y6R9 512 aa17.06■□□□□ 0.32
ABR-226ENST00000574257 KIAA1210Q9ULL0 1709 aa17.06■□□□□ 0.32
ABR-226ENST00000574257 ACEP12821 1306 aa17.05■□□□□ 0.32
ABR-226ENST00000574257 PLEKHG3A1L390 1219 aa17.05■□□□□ 0.32
ABR-226ENST00000574257 SIN3AQ96ST3 1273 aa17.05■□□□□ 0.32
ABR-226ENST00000574257 NUTM2GQ5VZR2 741 aa17.04■□□□□ 0.32
ABR-226ENST00000574257 FAM98CQ17RN3 349 aaKnown RBP17.03■□□□□ 0.32
ABR-226ENST00000574257 KRT27Q7Z3Y8 459 aa17.03■□□□□ 0.32
ABR-226ENST00000574257 DEFB132Q7Z7B7 95 aa17.03■□□□□ 0.32
ABR-226ENST00000574257 POLR3AO14802 1390 aaPredicted RBP17.02■□□□□ 0.32
ABR-226ENST00000574257 NRAPQ86VF7 1730 aa17.02■□□□□ 0.32
ABR-226ENST00000574257 CRYBG1Q9Y4K1 1723 aa17.02■□□□□ 0.32
ABR-226ENST00000574257 COL14A1Q05707 1796 aaKnown RBP17.02■□□□□ 0.31
ABR-226ENST00000574257 ITSN1Q15811 1721 aa17.01■□□□□ 0.31
ABR-226ENST00000574257 SPATA31A5Q5VU36 1347 aa17.01■□□□□ 0.31
ABR-226ENST00000574257 SPATA31A7Q8IWB4 1347 aa17.01■□□□□ 0.31
ABR-226ENST00000574257 CHRNA2Q15822 529 aa17.01■□□□□ 0.31
ABR-226ENST00000574257 CABP2Q9NPB3 220 aa17.01■□□□□ 0.31
ABR-226ENST00000574257 PRDM11Q9NQV5 511 aa17.01■□□□□ 0.31
ABR-226ENST00000574257 ZRANB1Q9UGI0 708 aa17.01■□□□□ 0.31
ABR-226ENST00000574257 BLMP54132 1417 aaPredicted RBP17.01■□□□□ 0.31
ABR-226ENST00000574257 CENPJQ9HC77 1338 aaPredicted RBP17■□□□□ 0.31
ABR-226ENST00000574257 ZC3H6P61129 1189 aaKnown RBP17■□□□□ 0.31
ABR-226ENST00000574257 KIAA0232Q92628 1395 aa17■□□□□ 0.31
ABR-226ENST00000574257 SRPK2P78362 688 aaKnown RBP16.99■□□□□ 0.31
ABR-226ENST00000574257 TOPAZ1Q8N9V7 1692 aa16.98■□□□□ 0.31
ABR-226ENST00000574257 A0A0G2JS52 829 aa16.98■□□□□ 0.31
ABR-226ENST00000574257 MYT1Q01538 1121 aa16.98■□□□□ 0.31
ABR-226ENST00000574257 NEUROD1Q13562 356 aa16.98■□□□□ 0.31
ABR-226ENST00000574257 FAM182BQ5T319 152 aa16.97■□□□□ 0.31
ABR-226ENST00000574257 ABTB2Q8N961 1025 aa16.97■□□□□ 0.31
ABR-226ENST00000574257 STRN4Q9NRL3 753 aa16.96■□□□□ 0.31
ABR-226ENST00000574257 CABP1Q9NZU7 370 aa16.96■□□□□ 0.31
ABR-226ENST00000574257 PPIP5K1Q6PFW1 1433 aa16.95■□□□□ 0.3
ABR-226ENST00000574257 SPATA31A1Q5TZJ5 1347 aa16.95■□□□□ 0.3
ABR-226ENST00000574257 SF3B2Q13435 895 aaKnown RBP16.94■□□□□ 0.3
ABR-226ENST00000574257 PHRF1Q9P1Y6 1649 aaKnown RBP16.94■□□□□ 0.3
ABR-226ENST00000574257 USP19O94966 1318 aa16.93■□□□□ 0.3
ABR-226ENST00000574257 GCP02774 474 aa16.92■□□□□ 0.3
ABR-226ENST00000574257 QRICH2Q9H0J4 1663 aa16.91■□□□□ 0.3
ABR-226ENST00000574257 EVA1CP58658 441 aa16.91■□□□□ 0.3
ABR-226ENST00000574257 NLRP13Q86W25 1043 aa16.91■□□□□ 0.3
ABR-226ENST00000574257 CAMTA1Q9Y6Y1 1673 aa16.91■□□□□ 0.3
ABR-226ENST00000574257 LARP1Q6PKG0 1096 aaKnown RBP16.9■□□□□ 0.3
ABR-226ENST00000574257 USP35Q9P2H5 1018 aa16.9■□□□□ 0.3
ABR-226ENST00000574257 THSD7AQ9UPZ6 1657 aa16.9■□□□□ 0.3
ABR-226ENST00000574257 CPDO75976 1380 aa16.89■□□□□ 0.3
ABR-226ENST00000574257 TRPM1Q7Z4N2 1603 aa16.89■□□□□ 0.29
ABR-226ENST00000574257 NLRP6P59044 892 aa16.88■□□□□ 0.29
ABR-226ENST00000574257 EN1Q05925 392 aaPredicted RBP16.88■□□□□ 0.29
ABR-226ENST00000574257 NRKQ7Z2Y5 1582 aa16.88■□□□□ 0.29
ABR-226ENST00000574257 EVC2Q86UK5 1308 aa16.88■□□□□ 0.29
ABR-226ENST00000574257 USP6P35125 1406 aa16.87■□□□□ 0.29
ABR-226ENST00000574257 SSH2Q76I76 1423 aa16.87■□□□□ 0.29
ABR-226ENST00000574257 BAG6P46379 1132 aa16.87■□□□□ 0.29
ABR-226ENST00000574257 BRD4O60885 1362 aaPredicted RBP16.87■□□□□ 0.29
ABR-226ENST00000574257 ROCK2O75116 1388 aaKnown RBP16.87■□□□□ 0.29
ABR-226ENST00000574257 BARGINQ6ZT62 677 aa16.86■□□□□ 0.29
ABR-226ENST00000574257 LMO7Q8WWI1 1683 aa16.85■□□□□ 0.29
ABR-226ENST00000574257 ZBTB7CA1YPR0 619 aa16.84■□□□□ 0.29
ABR-226ENST00000574257 TRIM37O94972 964 aa16.84■□□□□ 0.29
ABR-226ENST00000574257 TCP11L2Q8N4U5 519 aa16.84■□□□□ 0.29
ABR-226ENST00000574257 PSDA5PKW4 1024 aaPredicted RBP16.83■□□□□ 0.28
ABR-226ENST00000574257 FAM196AQ6ZSG2 479 aa16.83■□□□□ 0.28
ABR-226ENST00000574257 TTC21BQ7Z4L5 1316 aa16.83■□□□□ 0.28
ABR-226ENST00000574257 ZNF692Q9BU19 519 aaPredicted RBP16.83■□□□□ 0.28
ABR-226ENST00000574257 EZH2Q15910 746 aaKnown RBP16.82■□□□□ 0.28
ABR-226ENST00000574257 AXIN2Q9Y2T1 843 aa16.82■□□□□ 0.28
ABR-226ENST00000574257 PDE3BQ13370 1112 aa16.81■□□□□ 0.28
ABR-226ENST00000574257 CAMKK2Q96RR4 588 aa16.81■□□□□ 0.28
ABR-226ENST00000574257 RGPD1P0DJD0 1748 aa16.81■□□□□ 0.28
ABR-226ENST00000574257 COL5A2P05997 1499 aaPredicted RBP16.8■□□□□ 0.28
ABR-226ENST00000574257 AATKQ6ZMQ8 1374 aa16.8■□□□□ 0.28
ABR-226ENST00000574257 THRAP3Q9Y2W1 955 aaKnown RBP16.8■□□□□ 0.28
ABR-226ENST00000574257 SLIT3O75094 1523 aa16.8■□□□□ 0.28
ABR-226ENST00000574257 PIK3C2AO00443 1686 aa16.79■□□□□ 0.28
ABR-226ENST00000574257 ARHGEF25Q86VW2 580 aa16.79■□□□□ 0.28
ABR-226ENST00000574257 CARD11Q9BXL7 1154 aa16.79■□□□□ 0.28
ABR-226ENST00000574257 COL18A1P39060 1754 aa16.79■□□□□ 0.28
ABR-226ENST00000574257 TNS1Q9HBL0 1735 aaKnown RBP16.79■□□□□ 0.28
ABR-226ENST00000574257 DISP2A7MBM2 1401 aa16.79■□□□□ 0.28
ABR-226ENST00000574257 CPSF1Q10570 1443 aaKnown RBP16.79■□□□□ 0.28
ABR-226ENST00000574257 APBA3O96018 575 aa16.78■□□□□ 0.28
ABR-226ENST00000574257 SOX12O15370 315 aa16.77■□□□□ 0.28
ABR-226ENST00000574257 R3HDM1Q15032 1099 aaKnown RBP16.77■□□□□ 0.28
ABR-226ENST00000574257 CRB1P82279 1406 aa16.77■□□□□ 0.27
ABR-226ENST00000574257 AKAP12Q02952 1782 aa16.77■□□□□ 0.27
ABR-226ENST00000574257 KTN1Q86UP2 1357 aaKnown RBP16.76■□□□□ 0.27
ABR-226ENST00000574257 TTC21AQ8NDW8 1320 aa16.75■□□□□ 0.27
ABR-226ENST00000574257 TOM1L2Q6ZVM7 507 aa16.75■□□□□ 0.27
ABR-226ENST00000574257 SLC12A5Q9H2X9 1139 aa16.75■□□□□ 0.27
ABR-226ENST00000574257 SBNO2Q9Y2G9 1366 aa16.75■□□□□ 0.27
ABR-226ENST00000574257 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.74■□□□□ 0.27
ABR-226ENST00000574257 KCNH5Q8NCM2 988 aa16.74■□□□□ 0.27
ABR-226ENST00000574257 RGPD5Q99666 1765 aa16.74■□□□□ 0.27
ABR-226ENST00000574257 PARP4Q9UKK3 1724 aaKnown RBP16.73■□□□□ 0.27
ABR-226ENST00000574257 WDR17Q8IZU2 1322 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms