RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 NBPF8Q3BBV2 869 aa23.53■■□□□ 1.36
TVP23B-206ENST00000574226 GJD4Q96KN9 370 aaPredicted RBP23.53■■□□□ 1.36
TVP23B-206ENST00000574226 ACEP12821 1306 aa23.53■■□□□ 1.36
TVP23B-206ENST00000574226 EVC2Q86UK5 1308 aa23.53■■□□□ 1.36
TVP23B-206ENST00000574226 BRD4O60885 1362 aaPredicted RBP23.52■■□□□ 1.36
TVP23B-206ENST00000574226 UPF1Q92900 1129 aaKnown RBP eCLIP23.51■■□□□ 1.35
TVP23B-206ENST00000574226 PPIP5K1Q6PFW1 1433 aa23.5■■□□□ 1.35
TVP23B-206ENST00000574226 PLCH1Q4KWH8 1693 aa23.49■■□□□ 1.35
TVP23B-206ENST00000574226 CABP2Q9NPB3 220 aa23.48■■□□□ 1.35
TVP23B-206ENST00000574226 COL14A1Q05707 1796 aaKnown RBP23.47■■□□□ 1.35
TVP23B-206ENST00000574226 PLEKHG5O94827 1062 aa23.47■■□□□ 1.35
TVP23B-206ENST00000574226 VPS72Q15906 364 aa23.47■■□□□ 1.35
TVP23B-206ENST00000574226 ATAD2Q6PL18 1390 aa23.47■■□□□ 1.35
TVP23B-206ENST00000574226 SBNO2Q9Y2G9 1366 aa23.47■■□□□ 1.35
TVP23B-206ENST00000574226 CRYBG1Q9Y4K1 1723 aa23.47■■□□□ 1.35
TVP23B-206ENST00000574226 FAM83GA6ND36 823 aa23.46■■□□□ 1.35
TVP23B-206ENST00000574226 RALGAPBQ86X10 1494 aa23.46■■□□□ 1.35
TVP23B-206ENST00000574226 CARD11Q9BXL7 1154 aa23.45■■□□□ 1.34
TVP23B-206ENST00000574226 ABTB2Q8N961 1025 aa23.43■■□□□ 1.34
TVP23B-206ENST00000574226 PRDM11Q9NQV5 511 aa23.42■■□□□ 1.34
TVP23B-206ENST00000574226 CABP1Q9NZU7 370 aa23.42■■□□□ 1.34
TVP23B-206ENST00000574226 GLI3P10071 1580 aa23.42■■□□□ 1.34
TVP23B-206ENST00000574226 NLRP13Q86W25 1043 aa23.41■■□□□ 1.34
TVP23B-206ENST00000574226 BTG4Q9NY30 223 aa23.41■■□□□ 1.34
TVP23B-206ENST00000574226 SLC24A1O60721 1099 aa23.4■■□□□ 1.34
TVP23B-206ENST00000574226 ZNF692Q9BU19 519 aaPredicted RBP23.4■■□□□ 1.34
TVP23B-206ENST00000574226 CCDC9Q9Y3X0 531 aaKnown RBP23.4■■□□□ 1.34
TVP23B-206ENST00000574226 PHRF1Q9P1Y6 1649 aaKnown RBP23.4■■□□□ 1.34
TVP23B-206ENST00000574226 ONECUT3O60422 494 aaPredicted RBP23.39■■□□□ 1.33
TVP23B-206ENST00000574226 USP6P35125 1406 aa23.39■■□□□ 1.33
TVP23B-206ENST00000574226 CLSPNQ9HAW4 1339 aa23.38■■□□□ 1.33
TVP23B-206ENST00000574226 NRAPQ86VF7 1730 aa23.38■■□□□ 1.33
TVP23B-206ENST00000574226 CCDC125Q86Z20 511 aa23.37■■□□□ 1.33
TVP23B-206ENST00000574226 USP19O94966 1318 aa23.36■■□□□ 1.33
TVP23B-206ENST00000574226 KIAA0232Q92628 1395 aa23.36■■□□□ 1.33
TVP23B-206ENST00000574226 NUTM2GQ5VZR2 741 aa23.35■■□□□ 1.33
TVP23B-206ENST00000574226 TIMELESSQ9UNS1 1208 aa23.35■■□□□ 1.33
TVP23B-206ENST00000574226 CPDO75976 1380 aa23.35■■□□□ 1.33
TVP23B-206ENST00000574226 PUS7Q96PZ0 661 aaKnown RBP23.34■■□□□ 1.33
TVP23B-206ENST00000574226 SEPT12Q8IYM1 358 aa23.33■■□□□ 1.33
TVP23B-206ENST00000574226 ZC3H6P61129 1189 aaKnown RBP23.32■■□□□ 1.32
TVP23B-206ENST00000574226 SSH2Q76I76 1423 aa23.32■■□□□ 1.32
TVP23B-206ENST00000574226 NRKQ7Z2Y5 1582 aa23.31■■□□□ 1.32
TVP23B-206ENST00000574226 GCP02774 474 aa23.31■■□□□ 1.32
TVP23B-206ENST00000574226 AKAP12Q02952 1782 aa23.31■■□□□ 1.32
TVP23B-206ENST00000574226 SPATA31A5Q5VU36 1347 aa23.31■■□□□ 1.32
TVP23B-206ENST00000574226 SPATA31A7Q8IWB4 1347 aa23.31■■□□□ 1.32
TVP23B-206ENST00000574226 TTC21AQ8NDW8 1320 aa23.31■■□□□ 1.32
TVP23B-206ENST00000574226 NLRP6P59044 892 aa23.3■■□□□ 1.32
TVP23B-206ENST00000574226 CPSF1Q10570 1443 aaKnown RBP23.29■■□□□ 1.32
TVP23B-206ENST00000574226 BRWD3Q6RI45 1802 aa23.29■■□□□ 1.32
TVP23B-206ENST00000574226 CHRNA2Q15822 529 aa23.28■■□□□ 1.32
TVP23B-206ENST00000574226 KRT27Q7Z3Y8 459 aa23.27■■□□□ 1.32
TVP23B-206ENST00000574226 TTC21BQ7Z4L5 1316 aa23.27■■□□□ 1.32
TVP23B-206ENST00000574226 KTN1Q86UP2 1357 aaKnown RBP23.27■■□□□ 1.31
TVP23B-206ENST00000574226 A0A0G2JS52 829 aa23.26■■□□□ 1.31
TVP23B-206ENST00000574226 EVA1CP58658 441 aa23.26■■□□□ 1.31
TVP23B-206ENST00000574226 MYT1Q01538 1121 aa23.26■■□□□ 1.31
TVP23B-206ENST00000574226 SLIT3O75094 1523 aa23.26■■□□□ 1.31
TVP23B-206ENST00000574226 FAM98CQ17RN3 349 aaKnown RBP23.25■■□□□ 1.31
TVP23B-206ENST00000574226 KCNH5Q8NCM2 988 aa23.25■■□□□ 1.31
TVP23B-206ENST00000574226 PIK3C2AO00443 1686 aa23.25■■□□□ 1.31
TVP23B-206ENST00000574226 SPATA31A1Q5TZJ5 1347 aa23.24■■□□□ 1.31
TVP23B-206ENST00000574226 NINLQ9Y2I6 1382 aa23.24■■□□□ 1.31
TVP23B-206ENST00000574226 EP400Q96L91 3159 aa23.24■■□□□ 1.31
TVP23B-206ENST00000574226 LMO7Q8WWI1 1683 aa23.23■■□□□ 1.31
TVP23B-206ENST00000574226 MON2Q7Z3U7 1717 aa23.23■■□□□ 1.31
TVP23B-206ENST00000574226 HDGFL2Q7Z4V5 671 aaPredicted RBP23.23■■□□□ 1.31
TVP23B-206ENST00000574226 PCGF6Q9BYE7 350 aa23.23■■□□□ 1.31
TVP23B-206ENST00000574226 STRN4Q9NRL3 753 aa23.23■■□□□ 1.31
TVP23B-206ENST00000574226 TERF2IPQ9NYB0 399 aa23.23■■□□□ 1.31
TVP23B-206ENST00000574226 BLMP54132 1417 aaPredicted RBP23.23■■□□□ 1.31
TVP23B-206ENST00000574226 ST20-MTHFSA0A0A6YYL1 179 aa23.22■■□□□ 1.31
TVP23B-206ENST00000574226 AATKQ6ZMQ8 1374 aa23.22■■□□□ 1.31
TVP23B-206ENST00000574226 CAMTA1Q9Y6Y1 1673 aa23.22■■□□□ 1.31
TVP23B-206ENST00000574226 TMC1Q8TDI8 760 aa23.21■■□□□ 1.31
TVP23B-206ENST00000574226 TESK2Q96S53 571 aa23.21■■□□□ 1.31
TVP23B-206ENST00000574226 SF3B2Q13435 895 aaKnown RBP23.2■■□□□ 1.3
TVP23B-206ENST00000574226 THSD7AQ9UPZ6 1657 aa23.19■■□□□ 1.3
TVP23B-206ENST00000574226 BARGINQ6ZT62 677 aa23.19■■□□□ 1.3
TVP23B-206ENST00000574226 THRAP3Q9Y2W1 955 aaKnown RBP23.19■■□□□ 1.3
TVP23B-206ENST00000574226 COL5A2P05997 1499 aaPredicted RBP23.17■■□□□ 1.3
TVP23B-206ENST00000574226 CD163L1Q9NR16 1453 aa23.17■■□□□ 1.3
TVP23B-206ENST00000574226 EDC4Q6P2E9 1401 aaKnown RBP23.16■■□□□ 1.3
TVP23B-206ENST00000574226 USP31Q70CQ4 1352 aa23.16■■□□□ 1.3
TVP23B-206ENST00000574226 USP47Q96K76 1375 aa23.16■■□□□ 1.3
TVP23B-206ENST00000574226 SLC12A5Q9H2X9 1139 aa23.16■■□□□ 1.3
TVP23B-206ENST00000574226 TMF1P82094 1093 aa23.15■■□□□ 1.3
TVP23B-206ENST00000574226 CDCA8Q53HL2 280 aa23.15■■□□□ 1.3
TVP23B-206ENST00000574226 TCP11L2Q8N4U5 519 aa23.15■■□□□ 1.3
TVP23B-206ENST00000574226 USP54Q70EL1 1684 aa23.15■■□□□ 1.3
TVP23B-206ENST00000574226 LARP1Q6PKG0 1096 aaKnown RBP23.14■■□□□ 1.29
TVP23B-206ENST00000574226 ARHGEF25Q86VW2 580 aa23.14■■□□□ 1.29
TVP23B-206ENST00000574226 CRB1P82279 1406 aa23.14■■□□□ 1.29
TVP23B-206ENST00000574226 ABCC6O95255 1503 aa23.13■■□□□ 1.29
TVP23B-206ENST00000574226 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.13■■□□□ 1.293e-6■■■■□ 22.5
TVP23B-206ENST00000574226 USP35Q9P2H5 1018 aa23.13■■□□□ 1.29
TVP23B-206ENST00000574226 ZBTB7CA1YPR0 619 aa23.12■■□□□ 1.29
TVP23B-206ENST00000574226 A0A1W2PP64 1363 aa23.12■■□□□ 1.29
TVP23B-206ENST00000574226 COL18A1P39060 1754 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms