RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 PPP4R3CPQ6ZMV5 832 aa9.24□□□□□ -0.93
PRPF8-210ENST00000574217 SLC12A5Q9H2X9 1139 aa9.24□□□□□ -0.93
PRPF8-210ENST00000574217 MON2Q7Z3U7 1717 aa9.24□□□□□ -0.93
PRPF8-210ENST00000574217 MED1Q15648 1581 aaPredicted RBP9.24□□□□□ -0.93
PRPF8-210ENST00000574217 LRP6O75581 1613 aa9.23□□□□□ -0.93
PRPF8-210ENST00000574217 CD163L1Q9NR16 1453 aa9.23□□□□□ -0.93
PRPF8-210ENST00000574217 PAK3O75914 559 aaPredicted RBP9.23□□□□□ -0.93
PRPF8-210ENST00000574217 DDX10Q13206 875 aaKnown RBP9.23□□□□□ -0.93
PRPF8-210ENST00000574217 LMOD2Q6P5Q4 547 aa9.23□□□□□ -0.93
PRPF8-210ENST00000574217 SPATA31A6Q5VVP1 1343 aa9.23□□□□□ -0.93
PRPF8-210ENST00000574217 USP6P35125 1406 aa9.22□□□□□ -0.93
PRPF8-210ENST00000574217 CPSF1Q10570 1443 aaKnown RBP9.22□□□□□ -0.93
PRPF8-210ENST00000574217 ABCA3Q99758 1704 aa9.22□□□□□ -0.93
PRPF8-210ENST00000574217 NRKQ7Z2Y5 1582 aa9.22□□□□□ -0.93
PRPF8-210ENST00000574217 NUTM2BA6NNL0 878 aaPredicted RBP9.22□□□□□ -0.93
PRPF8-210ENST00000574217 NUTM2EB1AL46 878 aaPredicted RBP9.22□□□□□ -0.93
PRPF8-210ENST00000574217 PLEKHG5O94827 1062 aa9.22□□□□□ -0.93
PRPF8-210ENST00000574217 NUTM2AQ8IVF1 878 aaPredicted RBP9.22□□□□□ -0.93
PRPF8-210ENST00000574217 TERF2IPQ9NYB0 399 aa9.22□□□□□ -0.93
PRPF8-210ENST00000574217 ANKRD36BQ8N2N9 1353 aa9.22□□□□□ -0.93
PRPF8-210ENST00000574217 HDGFL2Q7Z4V5 671 aaPredicted RBP9.21□□□□□ -0.94
PRPF8-210ENST00000574217 ZNF692Q9BU19 519 aaPredicted RBP9.21□□□□□ -0.94
PRPF8-210ENST00000574217 PANK3Q9H999 370 aa9.21□□□□□ -0.94
PRPF8-210ENST00000574217 MARF1Q9Y4F3 1742 aaKnown RBP9.21□□□□□ -0.94
PRPF8-210ENST00000574217 CRYBG1Q9Y4K1 1723 aa9.21□□□□□ -0.94
PRPF8-210ENST00000574217 A0A1W2PP64 1363 aa9.21□□□□□ -0.94
PRPF8-210ENST00000574217 ARHGEF10O15013 1369 aa9.21□□□□□ -0.94
PRPF8-210ENST00000574217 KTN1Q86UP2 1357 aaKnown RBP9.21□□□□□ -0.94
PRPF8-210ENST00000574217 SSH2Q76I76 1423 aa9.21□□□□□ -0.94
PRPF8-210ENST00000574217 PIK3C2AO00443 1686 aa9.2□□□□□ -0.94
PRPF8-210ENST00000574217 NUTM2GQ5VZR2 741 aa9.2□□□□□ -0.94
PRPF8-210ENST00000574217 CABLES1Q8TDN4 633 aa9.2□□□□□ -0.94
PRPF8-210ENST00000574217 BRD4O60885 1362 aaPredicted RBP9.2□□□□□ -0.94
PRPF8-210ENST00000574217 PHRF1Q9P1Y6 1649 aaKnown RBP9.2□□□□□ -0.94
PRPF8-210ENST00000574217 ABTB2Q8N961 1025 aa9.19□□□□□ -0.94
PRPF8-210ENST00000574217 TTC21BQ7Z4L5 1316 aa9.19□□□□□ -0.94
PRPF8-210ENST00000574217 ADAMTS2O95450 1211 aa9.18□□□□□ -0.94
PRPF8-210ENST00000574217 MEX3CQ5U5Q3 659 aaKnown RBP9.18□□□□□ -0.94
PRPF8-210ENST00000574217 KNSTRNQ9Y448 316 aa9.18□□□□□ -0.94
PRPF8-210ENST00000574217 EDC4Q6P2E9 1401 aaKnown RBP9.17□□□□□ -0.94
PRPF8-210ENST00000574217 NSD3Q9BZ95 1437 aa9.17□□□□□ -0.94
PRPF8-210ENST00000574217 TTC21AQ8NDW8 1320 aa9.17□□□□□ -0.94
PRPF8-210ENST00000574217 HAP1P54257 671 aaPredicted RBP9.17□□□□□ -0.94
PRPF8-210ENST00000574217 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.17□□□□□ -0.94
PRPF8-210ENST00000574217 CARD14Q9BXL6 1004 aa9.17□□□□□ -0.94
PRPF8-210ENST00000574217 CGNL1Q0VF96 1302 aa9.16□□□□□ -0.94
PRPF8-210ENST00000574217 PER1O15534 1290 aaPredicted RBP9.16□□□□□ -0.94
PRPF8-210ENST00000574217 NLRP6P59044 892 aa9.16□□□□□ -0.94
PRPF8-210ENST00000574217 DIEXFQ68CQ4 756 aaKnown RBP9.16□□□□□ -0.94
PRPF8-210ENST00000574217 NLRP13Q86W25 1043 aa9.16□□□□□ -0.94
PRPF8-210ENST00000574217 NME9Q86XW9 330 aa9.16□□□□□ -0.94
PRPF8-210ENST00000574217 C8orf37Q96NL8 207 aa9.16□□□□□ -0.94
PRPF8-210ENST00000574217 ZRANB1Q9UGI0 708 aa9.16□□□□□ -0.94
PRPF8-210ENST00000574217 KIF20BQ96Q89 1820 aa9.16□□□□□ -0.94
PRPF8-210ENST00000574217 USP54Q70EL1 1684 aa9.16□□□□□ -0.94
PRPF8-210ENST00000574217 USP19O94966 1318 aa9.15□□□□□ -0.94
PRPF8-210ENST00000574217 RGS17Q9UGC6 210 aaPredicted RBP9.15□□□□□ -0.94
PRPF8-210ENST00000574217 SLIT3O75094 1523 aa9.15□□□□□ -0.95
PRPF8-210ENST00000574217 USP31Q70CQ4 1352 aa9.14□□□□□ -0.95
PRPF8-210ENST00000574217 PLCH1Q4KWH8 1693 aa9.14□□□□□ -0.95
PRPF8-210ENST00000574217 AFF2P51816 1311 aa9.14□□□□□ -0.95
PRPF8-210ENST00000574217 NGLY1Q96IV0 654 aa9.14□□□□□ -0.95
PRPF8-210ENST00000574217 NSD2O96028 1365 aa9.13□□□□□ -0.95
PRPF8-210ENST00000574217 NPC1L1Q9UHC9 1359 aa9.13□□□□□ -0.95
PRPF8-210ENST00000574217 GCP02774 474 aa9.13□□□□□ -0.95
PRPF8-210ENST00000574217 KCNA4P22459 653 aa9.13□□□□□ -0.95
PRPF8-210ENST00000574217 ZC3H6P61129 1189 aaKnown RBP9.13□□□□□ -0.95
PRPF8-210ENST00000574217 AMER1Q5JTC6 1135 aaPredicted RBP9.13□□□□□ -0.95
PRPF8-210ENST00000574217 COL14A1Q05707 1796 aaKnown RBP9.13□□□□□ -0.95
PRPF8-210ENST00000574217 OVOS2A0A0J9YW53 1432 aa9.13□□□□□ -0.95
PRPF8-210ENST00000574217 OVOS2Q6IE36 1432 aa9.13□□□□□ -0.95
PRPF8-210ENST00000574217 KIAA0232Q92628 1395 aa9.12□□□□□ -0.95
PRPF8-210ENST00000574217 NWD2Q9ULI1 1742 aa9.12□□□□□ -0.95
PRPF8-210ENST00000574217 FAM83GA6ND36 823 aa9.12□□□□□ -0.95
PRPF8-210ENST00000574217 FYB1O15117 783 aa9.12□□□□□ -0.95
PRPF8-210ENST00000574217 SOX12O15370 315 aa9.12□□□□□ -0.95
PRPF8-210ENST00000574217 CNGB1Q14028 1251 aaPredicted RBP9.12□□□□□ -0.95
PRPF8-210ENST00000574217 CC2D1BQ5T0F9 858 aaKnown RBP9.12□□□□□ -0.95
PRPF8-210ENST00000574217 GGNBP2Q9H3C7 697 aa9.12□□□□□ -0.95
PRPF8-210ENST00000574217 LTN1O94822 1766 aa9.12□□□□□ -0.95
PRPF8-210ENST00000574217 NRAPQ86VF7 1730 aa9.11□□□□□ -0.95
PRPF8-210ENST00000574217 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.11□□□□□ -0.95
PRPF8-210ENST00000574217 SLIT2O94813 1529 aa9.11□□□□□ -0.95
PRPF8-210ENST00000574217 NFAT5O94916 1531 aa9.11□□□□□ -0.95
PRPF8-210ENST00000574217 ANP32CO43423 234 aa9.11□□□□□ -0.95
PRPF8-210ENST00000574217 CHRNA2Q15822 529 aa9.11□□□□□ -0.95
PRPF8-210ENST00000574217 POTEAQ6S8J7 498 aa9.11□□□□□ -0.95
PRPF8-210ENST00000574217 FNBP4Q8N3X1 1017 aaPredicted RBP9.11□□□□□ -0.95
PRPF8-210ENST00000574217 PRDM11Q9NQV5 511 aa9.11□□□□□ -0.95
PRPF8-210ENST00000574217 USP21Q9UK80 565 aa9.11□□□□□ -0.95
PRPF8-210ENST00000574217 COL18A1P39060 1754 aa9.11□□□□□ -0.95
PRPF8-210ENST00000574217 RGPD5Q99666 1765 aa9.11□□□□□ -0.95
PRPF8-210ENST00000574217 ANKRD26Q9UPS8 1709 aa9.11□□□□□ -0.95
PRPF8-210ENST00000574217 BCL9LQ86UU0 1499 aa9.1□□□□□ -0.95
PRPF8-210ENST00000574217 ZBTB7CA1YPR0 619 aa9.1□□□□□ -0.95
PRPF8-210ENST00000574217 ZNF772Q68DY9 489 aaPredicted RBP9.1□□□□□ -0.95
PRPF8-210ENST00000574217 KCNH5Q8NCM2 988 aa9.1□□□□□ -0.95
PRPF8-210ENST00000574217 COG3Q96JB2 828 aa9.1□□□□□ -0.95
PRPF8-210ENST00000574217 CPDO75976 1380 aa9.1□□□□□ -0.95
PRPF8-210ENST00000574217 LMO7Q8WWI1 1683 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms