RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 LMOD2Q6P5Q4 547 aa20.36■□□□□ 0.85
ABR-223ENST00000573895 CABP2Q9NPB3 220 aa20.36■□□□□ 0.85
ABR-223ENST00000573895 TRPC5Q9UL62 973 aaPredicted RBP20.36■□□□□ 0.85
ABR-223ENST00000573895 PPIP5K1Q6PFW1 1433 aa20.36■□□□□ 0.85
ABR-223ENST00000573895 BRD4O60885 1362 aaPredicted RBP20.35■□□□□ 0.85
ABR-223ENST00000573895 SLIT2O94813 1529 aa20.35■□□□□ 0.85
ABR-223ENST00000573895 BCL9LQ86UU0 1499 aa20.35■□□□□ 0.85
ABR-223ENST00000573895 NWD2Q9ULI1 1742 aa20.34■□□□□ 0.85
ABR-223ENST00000573895 CRYBG1Q9Y4K1 1723 aa20.34■□□□□ 0.85
ABR-223ENST00000573895 HAP1P54257 671 aaPredicted RBP20.34■□□□□ 0.85
ABR-223ENST00000573895 ATRNO75882 1429 aa20.34■□□□□ 0.85
ABR-223ENST00000573895 CABLES1Q8TDN4 633 aa20.33■□□□□ 0.85
ABR-223ENST00000573895 PAK3O75914 559 aaPredicted RBP20.32■□□□□ 0.84
ABR-223ENST00000573895 UNC5CLQ8IV45 518 aa20.3■□□□□ 0.84
ABR-223ENST00000573895 CABP1Q9NZU7 370 aa20.3■□□□□ 0.84
ABR-223ENST00000573895 PLCH1Q4KWH8 1693 aa20.29■□□□□ 0.84
ABR-223ENST00000573895 ATAD2Q6PL18 1390 aa20.29■□□□□ 0.84
ABR-223ENST00000573895 SLC24A1O60721 1099 aa20.28■□□□□ 0.84
ABR-223ENST00000573895 COL14A1Q05707 1796 aaKnown RBP20.27■□□□□ 0.84
ABR-223ENST00000573895 AKAP12Q02952 1782 aa20.26■□□□□ 0.83
ABR-223ENST00000573895 PUS7Q96PZ0 661 aaKnown RBP20.26■□□□□ 0.83
ABR-223ENST00000573895 ZNF692Q9BU19 519 aaPredicted RBP20.26■□□□□ 0.83
ABR-223ENST00000573895 PHRF1Q9P1Y6 1649 aaKnown RBP20.26■□□□□ 0.83
ABR-223ENST00000573895 RGS12O14924 1447 aa20.26■□□□□ 0.83
ABR-223ENST00000573895 USP6P35125 1406 aa20.26■□□□□ 0.83
ABR-223ENST00000573895 FAM83GA6ND36 823 aa20.25■□□□□ 0.83
ABR-223ENST00000573895 GJD4Q96KN9 370 aaPredicted RBP20.25■□□□□ 0.83
ABR-223ENST00000573895 ABTB2Q8N961 1025 aa20.24■□□□□ 0.83
ABR-223ENST00000573895 PLEKHG5O94827 1062 aa20.23■□□□□ 0.83
ABR-223ENST00000573895 SSH2Q76I76 1423 aa20.23■□□□□ 0.83
ABR-223ENST00000573895 NRAPQ86VF7 1730 aa20.22■□□□□ 0.83
ABR-223ENST00000573895 VPS72Q15906 364 aa20.22■□□□□ 0.83
ABR-223ENST00000573895 NLRP13Q86W25 1043 aa20.22■□□□□ 0.83
ABR-223ENST00000573895 USP19O94966 1318 aa20.22■□□□□ 0.83
ABR-223ENST00000573895 CPSF1Q10570 1443 aaKnown RBP20.21■□□□□ 0.83
ABR-223ENST00000573895 GLI3P10071 1580 aa20.21■□□□□ 0.83
ABR-223ENST00000573895 ST20-MTHFSA0A0A6YYL1 179 aa20.2■□□□□ 0.82
ABR-223ENST00000573895 TESK2Q96S53 571 aa20.2■□□□□ 0.82
ABR-223ENST00000573895 MON2Q7Z3U7 1717 aa20.19■□□□□ 0.82
ABR-223ENST00000573895 PRDM11Q9NQV5 511 aa20.19■□□□□ 0.82
ABR-223ENST00000573895 NRKQ7Z2Y5 1582 aa20.19■□□□□ 0.82
ABR-223ENST00000573895 NUTM2GQ5VZR2 741 aa20.18■□□□□ 0.82
ABR-223ENST00000573895 BTG4Q9NY30 223 aa20.18■□□□□ 0.82
ABR-223ENST00000573895 CPDO75976 1380 aa20.18■□□□□ 0.82
ABR-223ENST00000573895 KIAA0232Q92628 1395 aa20.18■□□□□ 0.82
ABR-223ENST00000573895 PIK3C2AO00443 1686 aa20.17■□□□□ 0.82
ABR-223ENST00000573895 TTC21AQ8NDW8 1320 aa20.17■□□□□ 0.82
ABR-223ENST00000573895 ONECUT3O60422 494 aaPredicted RBP20.16■□□□□ 0.82
ABR-223ENST00000573895 UPF1Q92900 1129 aaKnown RBP eCLIP20.16■□□□□ 0.82
ABR-223ENST00000573895 USP47Q96K76 1375 aa20.16■□□□□ 0.82
ABR-223ENST00000573895 GCP02774 474 aa20.15■□□□□ 0.82
ABR-223ENST00000573895 TTC21BQ7Z4L5 1316 aa20.15■□□□□ 0.82
ABR-223ENST00000573895 KTN1Q86UP2 1357 aaKnown RBP20.15■□□□□ 0.82
ABR-223ENST00000573895 NINLQ9Y2I6 1382 aa20.15■□□□□ 0.82
ABR-223ENST00000573895 SLIT3O75094 1523 aa20.15■□□□□ 0.82
ABR-223ENST00000573895 EP400Q96L91 3159 aa20.15■□□□□ 0.82
ABR-223ENST00000573895 CD163L1Q9NR16 1453 aa20.14■□□□□ 0.81
ABR-223ENST00000573895 NLRP6P59044 892 aa20.14■□□□□ 0.81
ABR-223ENST00000573895 ZC3H6P61129 1189 aaKnown RBP20.13■□□□□ 0.81
ABR-223ENST00000573895 LMO7Q8WWI1 1683 aa20.12■□□□□ 0.81
ABR-223ENST00000573895 BRWD3Q6RI45 1802 aa20.11■□□□□ 0.81
ABR-223ENST00000573895 USP54Q70EL1 1684 aa20.11■□□□□ 0.81
ABR-223ENST00000573895 HDGFL2Q7Z4V5 671 aaPredicted RBP20.11■□□□□ 0.81
ABR-223ENST00000573895 TMC1Q8TDI8 760 aa20.11■□□□□ 0.81
ABR-223ENST00000573895 SLC12A5Q9H2X9 1139 aa20.11■□□□□ 0.81
ABR-223ENST00000573895 TERF2IPQ9NYB0 399 aa20.11■□□□□ 0.81
ABR-223ENST00000573895 CCDC9Q9Y3X0 531 aaKnown RBP20.11■□□□□ 0.81
ABR-223ENST00000573895 SPATA31A5Q5VU36 1347 aa20.1■□□□□ 0.81
ABR-223ENST00000573895 SPATA31A7Q8IWB4 1347 aa20.1■□□□□ 0.81
ABR-223ENST00000573895 TMF1P82094 1093 aa20.1■□□□□ 0.81
ABR-223ENST00000573895 CHRNA2Q15822 529 aa20.1■□□□□ 0.81
ABR-223ENST00000573895 KCNH5Q8NCM2 988 aa20.09■□□□□ 0.81
ABR-223ENST00000573895 EDC4Q6P2E9 1401 aaKnown RBP20.09■□□□□ 0.81
ABR-223ENST00000573895 USP31Q70CQ4 1352 aa20.08■□□□□ 0.81
ABR-223ENST00000573895 CAMTA1Q9Y6Y1 1673 aa20.08■□□□□ 0.81
ABR-223ENST00000573895 CDCA8Q53HL2 280 aa20.08■□□□□ 0.81
ABR-223ENST00000573895 SEPT12Q8IYM1 358 aa20.08■□□□□ 0.81
ABR-223ENST00000573895 A0A1W2PP64 1363 aa20.07■□□□□ 0.8
ABR-223ENST00000573895 AATKQ6ZMQ8 1374 aa20.07■□□□□ 0.8
ABR-223ENST00000573895 SPATA31A1Q5TZJ5 1347 aa20.05■□□□□ 0.8
ABR-223ENST00000573895 COL18A1P39060 1754 aa20.05■□□□□ 0.8
ABR-223ENST00000573895 EVA1CP58658 441 aa20.04■□□□□ 0.8
ABR-223ENST00000573895 CCDC125Q86Z20 511 aa20.04■□□□□ 0.8
ABR-223ENST00000573895 THSD7AQ9UPZ6 1657 aa20.03■□□□□ 0.8
ABR-223ENST00000573895 NFAT5O94916 1531 aa20.03■□□□□ 0.8
ABR-223ENST00000573895 FAM98CQ17RN3 349 aaKnown RBP20.03■□□□□ 0.8
ABR-223ENST00000573895 ARHGEF25Q86VW2 580 aa20.03■□□□□ 0.8
ABR-223ENST00000573895 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.03■□□□□ 0.8
ABR-223ENST00000573895 STRN4Q9NRL3 753 aa20.03■□□□□ 0.8
ABR-223ENST00000573895 ABCC6O95255 1503 aa20.02■□□□□ 0.8
ABR-223ENST00000573895 ANKRD36BQ8N2N9 1353 aa20.02■□□□□ 0.8
ABR-223ENST00000573895 COL5A2P05997 1499 aaPredicted RBP20.02■□□□□ 0.8
ABR-223ENST00000573895 KRT27Q7Z3Y8 459 aa20.01■□□□□ 0.79
ABR-223ENST00000573895 BARGINQ6ZT62 677 aa20■□□□□ 0.79
ABR-223ENST00000573895 THRAP3Q9Y2W1 955 aaKnown RBP20■□□□□ 0.79
ABR-223ENST00000573895 LARP1Q6PKG0 1096 aaKnown RBP19.99■□□□□ 0.79
ABR-223ENST00000573895 NME9Q86XW9 330 aa19.99■□□□□ 0.79
ABR-223ENST00000573895 RGPD5Q99666 1765 aa19.98■□□□□ 0.79
ABR-223ENST00000573895 CRB1P82279 1406 aa19.98■□□□□ 0.79
ABR-223ENST00000573895 OVOS2A0A0J9YW53 1432 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms