RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 TULP4Q9NRJ4 1543 aa17.88■□□□□ 0.45
CTDNEP1-205ENST00000570828 WASLO00401 505 aaPredicted RBP17.87■□□□□ 0.45
CTDNEP1-205ENST00000570828 FNBP4Q8N3X1 1017 aaPredicted RBP17.87■□□□□ 0.45
CTDNEP1-205ENST00000570828 PMFBP1Q8TBY8 1022 aa17.87■□□□□ 0.45
CTDNEP1-205ENST00000570828 SBNO1A3KN83 1393 aa17.87■□□□□ 0.45
CTDNEP1-205ENST00000570828 TRPC5Q9UL62 973 aaPredicted RBP17.86■□□□□ 0.45
CTDNEP1-205ENST00000570828 ARHGEF10O15013 1369 aa17.86■□□□□ 0.45
CTDNEP1-205ENST00000570828 USP32Q8NFA0 1604 aa17.86■□□□□ 0.45
CTDNEP1-205ENST00000570828 RGS12O14924 1447 aa17.85■□□□□ 0.45
CTDNEP1-205ENST00000570828 HAP1P54257 671 aaPredicted RBP17.85■□□□□ 0.45
CTDNEP1-205ENST00000570828 LMOD2Q6P5Q4 547 aa17.85■□□□□ 0.45
CTDNEP1-205ENST00000570828 PRR36Q9H6K5 1346 aa17.85■□□□□ 0.45
CTDNEP1-205ENST00000570828 ARHGEF28Q8N1W1 1705 aaKnown RBP17.84■□□□□ 0.45
CTDNEP1-205ENST00000570828 GPRASP1Q5JY77 1395 aa17.84■□□□□ 0.45
CTDNEP1-205ENST00000570828 KIAA1210Q9ULL0 1709 aa17.84■□□□□ 0.45
CTDNEP1-205ENST00000570828 ZNF692Q9BU19 519 aaPredicted RBP17.83■□□□□ 0.44
CTDNEP1-205ENST00000570828 RGPD8O14715 1765 aaPredicted RBP17.83■□□□□ 0.44
CTDNEP1-205ENST00000570828 ATRNO75882 1429 aa17.82■□□□□ 0.44
CTDNEP1-205ENST00000570828 PLEKHG5O94827 1062 aa17.81■□□□□ 0.44
CTDNEP1-205ENST00000570828 NBPF1Q3BBV0 1214 aa17.81■□□□□ 0.44
CTDNEP1-205ENST00000570828 NGDNQ8NEJ9 315 aaKnown RBP17.81■□□□□ 0.44
CTDNEP1-205ENST00000570828 ATP7BP35670 1465 aa17.81■□□□□ 0.44
CTDNEP1-205ENST00000570828 BCL9LQ86UU0 1499 aa17.81■□□□□ 0.44
CTDNEP1-205ENST00000570828 C19orf67A6NJJ6 358 aa17.8■□□□□ 0.44
CTDNEP1-205ENST00000570828 MKRN4PQ13434 485 aaPredicted RBP17.8■□□□□ 0.44
CTDNEP1-205ENST00000570828 L3MBTL2Q969R5 705 aa17.8■□□□□ 0.44
CTDNEP1-205ENST00000570828 SLC24A1O60721 1099 aa17.79■□□□□ 0.44
CTDNEP1-205ENST00000570828 CABLES1Q8TDN4 633 aa17.79■□□□□ 0.44
CTDNEP1-205ENST00000570828 UPF1Q92900 1129 aaKnown RBP eCLIP17.79■□□□□ 0.44
CTDNEP1-205ENST00000570828 NUDT16Q96DE0 195 aaKnown RBP17.79■□□□□ 0.44
CTDNEP1-205ENST00000570828 SIN3AQ96ST3 1273 aa17.79■□□□□ 0.44
CTDNEP1-205ENST00000570828 SSUH2Q9Y2M2 353 aa17.79■□□□□ 0.44
CTDNEP1-205ENST00000570828 NEUROD1Q13562 356 aa17.78■□□□□ 0.44
CTDNEP1-205ENST00000570828 CDK19Q9BWU1 502 aa17.78■□□□□ 0.44
CTDNEP1-205ENST00000570828 MARF1Q9Y4F3 1742 aaKnown RBP17.78■□□□□ 0.44
CTDNEP1-205ENST00000570828 SLIT2O94813 1529 aa17.77■□□□□ 0.44
CTDNEP1-205ENST00000570828 CENPJQ9HC77 1338 aaPredicted RBP17.76■□□□□ 0.43
CTDNEP1-205ENST00000570828 UNC5CLQ8IV45 518 aa17.76■□□□□ 0.43
CTDNEP1-205ENST00000570828 TRPM3Q9HCF6 1732 aaPredicted RBP17.75■□□□□ 0.43
CTDNEP1-205ENST00000570828 PAK3O75914 559 aaPredicted RBP17.75■□□□□ 0.43
CTDNEP1-205ENST00000570828 GJD4Q96KN9 370 aaPredicted RBP17.75■□□□□ 0.43
CTDNEP1-205ENST00000570828 ITSN1Q15811 1721 aa17.75■□□□□ 0.43
CTDNEP1-205ENST00000570828 CCDC61Q9Y6R9 512 aa17.74■□□□□ 0.43
CTDNEP1-205ENST00000570828 ATAD2Q6PL18 1390 aa17.74■□□□□ 0.43
CTDNEP1-205ENST00000570828 ABCA3Q99758 1704 aa17.72■□□□□ 0.43
CTDNEP1-205ENST00000570828 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.72■□□□□ 0.43
CTDNEP1-205ENST00000570828 ALS2Q96Q42 1657 aa17.72■□□□□ 0.43
CTDNEP1-205ENST00000570828 ROCK2O75116 1388 aaKnown RBP17.72■□□□□ 0.43
CTDNEP1-205ENST00000570828 SRPK2P78362 688 aaKnown RBP17.72■□□□□ 0.43
CTDNEP1-205ENST00000570828 RALGAPBQ86X10 1494 aa17.71■□□□□ 0.43
CTDNEP1-205ENST00000570828 POLR3AO14802 1390 aaPredicted RBP17.71■□□□□ 0.43
CTDNEP1-205ENST00000570828 TOPAZ1Q8N9V7 1692 aa17.7■□□□□ 0.42
CTDNEP1-205ENST00000570828 ACEP12821 1306 aa17.7■□□□□ 0.42
CTDNEP1-205ENST00000570828 PLEKHG3A1L390 1219 aa17.69■□□□□ 0.42
CTDNEP1-205ENST00000570828 VPS72Q15906 364 aa17.69■□□□□ 0.42
CTDNEP1-205ENST00000570828 CCDC9Q9Y3X0 531 aaKnown RBP17.69■□□□□ 0.42
CTDNEP1-205ENST00000570828 TRPM1Q7Z4N2 1603 aa17.69■□□□□ 0.42
CTDNEP1-205ENST00000570828 PLCH1Q4KWH8 1693 aa17.68■□□□□ 0.42
CTDNEP1-205ENST00000570828 FAM83GA6ND36 823 aa17.68■□□□□ 0.42
CTDNEP1-205ENST00000570828 TRIM26Q12899 539 aaPredicted RBP17.68■□□□□ 0.42
CTDNEP1-205ENST00000570828 PPIP5K1Q6PFW1 1433 aa17.68■□□□□ 0.42
CTDNEP1-205ENST00000570828 CABP2Q9NPB3 220 aa17.68■□□□□ 0.42
CTDNEP1-205ENST00000570828 QRICH2Q9H0J4 1663 aa17.67■□□□□ 0.42
CTDNEP1-205ENST00000570828 GLI3P10071 1580 aa17.67■□□□□ 0.42
CTDNEP1-205ENST00000570828 GABBR2O75899 941 aa17.67■□□□□ 0.42
CTDNEP1-205ENST00000570828 NBPF8Q3BBV2 869 aa17.67■□□□□ 0.42
CTDNEP1-205ENST00000570828 NWD2Q9ULI1 1742 aa17.67■□□□□ 0.42
CTDNEP1-205ENST00000570828 TONSLQ96HA7 1378 aa17.66■□□□□ 0.42
CTDNEP1-205ENST00000570828 EP400Q96L91 3159 aa17.66■□□□□ 0.42
CTDNEP1-205ENST00000570828 PRDM11Q9NQV5 511 aa17.66■□□□□ 0.42
CTDNEP1-205ENST00000570828 BTG4Q9NY30 223 aa17.66■□□□□ 0.42
CTDNEP1-205ENST00000570828 EVC2Q86UK5 1308 aa17.65■□□□□ 0.42
CTDNEP1-205ENST00000570828 NUTM2GQ5VZR2 741 aa17.64■□□□□ 0.41
CTDNEP1-205ENST00000570828 COL14A1Q05707 1796 aaKnown RBP17.63■□□□□ 0.41
CTDNEP1-205ENST00000570828 CRYBG1Q9Y4K1 1723 aa17.62■□□□□ 0.41
CTDNEP1-205ENST00000570828 SEPT12Q8IYM1 358 aa17.62■□□□□ 0.41
CTDNEP1-205ENST00000570828 ABTB2Q8N961 1025 aa17.62■□□□□ 0.41
CTDNEP1-205ENST00000570828 KIAA0232Q92628 1395 aa17.62■□□□□ 0.41
CTDNEP1-205ENST00000570828 A0A0G2JS52 829 aa17.61■□□□□ 0.41
CTDNEP1-205ENST00000570828 MYT1Q01538 1121 aa17.61■□□□□ 0.41
CTDNEP1-205ENST00000570828 CHADLQ6NUI6 762 aa17.61■□□□□ 0.41
CTDNEP1-205ENST00000570828 CABP1Q9NZU7 370 aa17.6■□□□□ 0.41
CTDNEP1-205ENST00000570828 BRD4O60885 1362 aaPredicted RBP17.6■□□□□ 0.41
CTDNEP1-205ENST00000570828 NRAPQ86VF7 1730 aa17.6■□□□□ 0.41
CTDNEP1-205ENST00000570828 PHRF1Q9P1Y6 1649 aaKnown RBP17.59■□□□□ 0.41
CTDNEP1-205ENST00000570828 ZC3H6P61129 1189 aaKnown RBP17.59■□□□□ 0.41
CTDNEP1-205ENST00000570828 CARD11Q9BXL7 1154 aa17.59■□□□□ 0.41
CTDNEP1-205ENST00000570828 USP6P35125 1406 aa17.58■□□□□ 0.41
CTDNEP1-205ENST00000570828 USP19O94966 1318 aa17.58■□□□□ 0.4
CTDNEP1-205ENST00000570828 ONECUT3O60422 494 aaPredicted RBP17.58■□□□□ 0.4
CTDNEP1-205ENST00000570828 PRR29P0C7W0 189 aa17.58■□□□□ 0.4
CTDNEP1-205ENST00000570828 CHRNA2Q15822 529 aa17.58■□□□□ 0.4
CTDNEP1-205ENST00000570828 FAM98CQ17RN3 349 aaKnown RBP17.58■□□□□ 0.4
CTDNEP1-205ENST00000570828 NLRP13Q86W25 1043 aa17.58■□□□□ 0.4
CTDNEP1-205ENST00000570828 CCDC125Q86Z20 511 aa17.58■□□□□ 0.4
CTDNEP1-205ENST00000570828 NRKQ7Z2Y5 1582 aa17.57■□□□□ 0.4
CTDNEP1-205ENST00000570828 SBNO2Q9Y2G9 1366 aa17.56■□□□□ 0.4
CTDNEP1-205ENST00000570828 SPATA31A5Q5VU36 1347 aa17.56■□□□□ 0.4
CTDNEP1-205ENST00000570828 SPATA31A7Q8IWB4 1347 aa17.56■□□□□ 0.4
CTDNEP1-205ENST00000570828 KRT27Q7Z3Y8 459 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 227.8 ms