RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 KIAA1210Q9ULL0 1709 aa21.5■■□□□ 1.03
NDE1-203ENST00000570727 PAK3O75914 559 aaPredicted RBP21.5■■□□□ 1.03
NDE1-203ENST00000570727 NRAPQ86VF7 1730 aa21.49■■□□□ 1.03
NDE1-203ENST00000570727 CRYBG1Q9Y4K1 1723 aa21.49■■□□□ 1.03
NDE1-203ENST00000570727 BLMP54132 1417 aaPredicted RBP21.48■■□□□ 1.03
NDE1-203ENST00000570727 ZRANB1Q9UGI0 708 aa21.48■■□□□ 1.03
NDE1-203ENST00000570727 ITSN1Q15811 1721 aa21.48■■□□□ 1.03
NDE1-203ENST00000570727 COL14A1Q05707 1796 aaKnown RBP21.48■■□□□ 1.03
NDE1-203ENST00000570727 KRT27Q7Z3Y8 459 aa21.47■■□□□ 1.03
NDE1-203ENST00000570727 FAM98CQ17RN3 349 aaKnown RBP21.45■■□□□ 1.02
NDE1-203ENST00000570727 NBPF8Q3BBV2 869 aa21.45■■□□□ 1.02
NDE1-203ENST00000570727 DEFB132Q7Z7B7 95 aa21.45■■□□□ 1.02
NDE1-203ENST00000570727 CCDC61Q9Y6R9 512 aa21.45■■□□□ 1.02
NDE1-203ENST00000570727 PLEKHG3A1L390 1219 aa21.44■■□□□ 1.02
NDE1-203ENST00000570727 ACEP12821 1306 aa21.44■■□□□ 1.02
NDE1-203ENST00000570727 POLR3AO14802 1390 aaPredicted RBP21.44■■□□□ 1.02
NDE1-203ENST00000570727 SPATA31A5Q5VU36 1347 aa21.42■■□□□ 1.02
NDE1-203ENST00000570727 SPATA31A7Q8IWB4 1347 aa21.42■■□□□ 1.02
NDE1-203ENST00000570727 TOPAZ1Q8N9V7 1692 aa21.42■■□□□ 1.02
NDE1-203ENST00000570727 NUTM2GQ5VZR2 741 aa21.41■■□□□ 1.02
NDE1-203ENST00000570727 PRDM11Q9NQV5 511 aa21.41■■□□□ 1.02
NDE1-203ENST00000570727 KIAA0232Q92628 1395 aa21.4■■□□□ 1.02
NDE1-203ENST00000570727 A0A0G2JS52 829 aa21.4■■□□□ 1.02
NDE1-203ENST00000570727 MYT1Q01538 1121 aa21.4■■□□□ 1.02
NDE1-203ENST00000570727 ZC3H6P61129 1189 aaKnown RBP21.39■■□□□ 1.01
NDE1-203ENST00000570727 SF3B2Q13435 895 aaKnown RBP21.39■■□□□ 1.01
NDE1-203ENST00000570727 CHRNA2Q15822 529 aa21.39■■□□□ 1.01
NDE1-203ENST00000570727 PHRF1Q9P1Y6 1649 aaKnown RBP21.38■■□□□ 1.01
NDE1-203ENST00000570727 L3MBTL2Q969R5 705 aa21.38■■□□□ 1.01
NDE1-203ENST00000570727 CENPJQ9HC77 1338 aaPredicted RBP21.37■■□□□ 1.01
NDE1-203ENST00000570727 SPATA31A1Q5TZJ5 1347 aa21.35■■□□□ 1.01
NDE1-203ENST00000570727 SRPK2P78362 688 aaKnown RBP21.35■■□□□ 1.01
NDE1-203ENST00000570727 FAM182BQ5T319 152 aa21.35■■□□□ 1.01
NDE1-203ENST00000570727 ABTB2Q8N961 1025 aa21.35■■□□□ 1.01
NDE1-203ENST00000570727 SIN3AQ96ST3 1273 aa21.35■■□□□ 1.01
NDE1-203ENST00000570727 CABP2Q9NPB3 220 aa21.35■■□□□ 1.01
NDE1-203ENST00000570727 THSD7AQ9UPZ6 1657 aa21.34■■□□□ 1.01
NDE1-203ENST00000570727 PPIP5K1Q6PFW1 1433 aa21.33■■□□□ 1.01
NDE1-203ENST00000570727 STRN4Q9NRL3 753 aa21.33■■□□□ 1.01
NDE1-203ENST00000570727 QRICH2Q9H0J4 1663 aa21.31■■□□□ 1
NDE1-203ENST00000570727 USP19O94966 1318 aa21.3■■□□□ 1
NDE1-203ENST00000570727 BAG6P46379 1132 aa21.3■■□□□ 1
NDE1-203ENST00000570727 CABP1Q9NZU7 370 aa21.3■■□□□ 1
NDE1-203ENST00000570727 CAMTA1Q9Y6Y1 1673 aa21.3■■□□□ 1
NDE1-203ENST00000570727 NRKQ7Z2Y5 1582 aa21.29■■□□□ 1
NDE1-203ENST00000570727 NLRP13Q86W25 1043 aa21.29■■□□□ 1
NDE1-203ENST00000570727 CPDO75976 1380 aa21.28■■□□□ 1
NDE1-203ENST00000570727 GCP02774 474 aa21.28■■□□□ 1
NDE1-203ENST00000570727 EVA1CP58658 441 aa21.28■■□□□ 1
NDE1-203ENST00000570727 NEUROD1Q13562 356 aa21.27■■□□□ 1
NDE1-203ENST00000570727 TRPM1Q7Z4N2 1603 aa21.26■□□□□ 0.99
NDE1-203ENST00000570727 BRD4O60885 1362 aaPredicted RBP21.26■□□□□ 0.99
NDE1-203ENST00000570727 LMO7Q8WWI1 1683 aa21.26■□□□□ 0.99
NDE1-203ENST00000570727 EN1Q05925 392 aaPredicted RBP21.26■□□□□ 0.99
NDE1-203ENST00000570727 LARP1Q6PKG0 1096 aaKnown RBP21.26■□□□□ 0.99
NDE1-203ENST00000570727 USP35Q9P2H5 1018 aa21.26■□□□□ 0.99
NDE1-203ENST00000570727 SSH2Q76I76 1423 aa21.26■□□□□ 0.99
NDE1-203ENST00000570727 RGPD1P0DJD0 1748 aa21.26■□□□□ 0.99
NDE1-203ENST00000570727 BARGINQ6ZT62 677 aa21.25■□□□□ 0.99
NDE1-203ENST00000570727 USP6P35125 1406 aa21.23■□□□□ 0.99
NDE1-203ENST00000570727 EVC2Q86UK5 1308 aa21.23■□□□□ 0.99
NDE1-203ENST00000570727 TNS1Q9HBL0 1735 aaKnown RBP21.22■□□□□ 0.99
NDE1-203ENST00000570727 NLRP6P59044 892 aa21.22■□□□□ 0.99
NDE1-203ENST00000570727 FAM196AQ6ZSG2 479 aa21.22■□□□□ 0.99
NDE1-203ENST00000570727 PSDA5PKW4 1024 aaPredicted RBP21.21■□□□□ 0.99
NDE1-203ENST00000570727 TRIM37O94972 964 aa21.21■□□□□ 0.99
NDE1-203ENST00000570727 TCP11L2Q8N4U5 519 aa21.21■□□□□ 0.99
NDE1-203ENST00000570727 DISP2A7MBM2 1401 aa21.21■□□□□ 0.99
NDE1-203ENST00000570727 ROCK2O75116 1388 aaKnown RBP21.2■□□□□ 0.98
NDE1-203ENST00000570727 EZH2Q15910 746 aaKnown RBP21.19■□□□□ 0.98
NDE1-203ENST00000570727 PDE3BQ13370 1112 aa21.18■□□□□ 0.98
NDE1-203ENST00000570727 CAMKK2Q96RR4 588 aa21.18■□□□□ 0.98
NDE1-203ENST00000570727 THRAP3Q9Y2W1 955 aaKnown RBP21.18■□□□□ 0.98
NDE1-203ENST00000570727 COL5A2P05997 1499 aaPredicted RBP21.18■□□□□ 0.98
NDE1-203ENST00000570727 SLIT3O75094 1523 aa21.18■□□□□ 0.98
NDE1-203ENST00000570727 PIK3C2AO00443 1686 aa21.16■□□□□ 0.98
NDE1-203ENST00000570727 AATKQ6ZMQ8 1374 aa21.16■□□□□ 0.98
NDE1-203ENST00000570727 ZNF692Q9BU19 519 aaPredicted RBP21.16■□□□□ 0.98
NDE1-203ENST00000570727 COL18A1P39060 1754 aa21.15■□□□□ 0.98
NDE1-203ENST00000570727 ZBTB7CA1YPR0 619 aa21.15■□□□□ 0.98
NDE1-203ENST00000570727 APBA3O96018 575 aa21.15■□□□□ 0.98
NDE1-203ENST00000570727 TTC21BQ7Z4L5 1316 aa21.14■□□□□ 0.97
NDE1-203ENST00000570727 AXIN2Q9Y2T1 843 aa21.14■□□□□ 0.97
NDE1-203ENST00000570727 AKAP12Q02952 1782 aa21.14■□□□□ 0.97
NDE1-203ENST00000570727 LRP5O75197 1615 aa21.14■□□□□ 0.97
NDE1-203ENST00000570727 CRB1P82279 1406 aa21.13■□□□□ 0.97
NDE1-203ENST00000570727 R3HDM1Q15032 1099 aaKnown RBP21.13■□□□□ 0.97
NDE1-203ENST00000570727 PARP4Q9UKK3 1724 aaKnown RBP21.12■□□□□ 0.97
NDE1-203ENST00000570727 CPSF1Q10570 1443 aaKnown RBP21.12■□□□□ 0.97
NDE1-203ENST00000570727 ARHGEF25Q86VW2 580 aa21.11■□□□□ 0.97
NDE1-203ENST00000570727 TTC21AQ8NDW8 1320 aa21.09■□□□□ 0.97
NDE1-203ENST00000570727 RGPD5Q99666 1765 aa21.09■□□□□ 0.97
NDE1-203ENST00000570727 TOM1L2Q6ZVM7 507 aa21.08■□□□□ 0.97
NDE1-203ENST00000570727 KCNH5Q8NCM2 988 aa21.08■□□□□ 0.97
NDE1-203ENST00000570727 PARD3Q8TEW0 1356 aa21.08■□□□□ 0.96
NDE1-203ENST00000570727 CARD11Q9BXL7 1154 aa21.07■□□□□ 0.96
NDE1-203ENST00000570727 KTN1Q86UP2 1357 aaKnown RBP21.07■□□□□ 0.96
NDE1-203ENST00000570727 SBNO2Q9Y2G9 1366 aa21.07■□□□□ 0.96
NDE1-203ENST00000570727 WDR17Q8IZU2 1322 aa21.06■□□□□ 0.96
NDE1-203ENST00000570727 SOX12O15370 315 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms