RNA–Protein interactions for RNA: ENST00000570513.5

CALCOCO2-225, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-225ENST00000570513 ANP32CO43423 234 aa15.75■□□□□ 0.11
CALCOCO2-225ENST00000570513 NPM3O75607 178 aaKnown RBP15.75■□□□□ 0.11
CALCOCO2-225ENST00000570513 CGNL1Q0VF96 1302 aa15.74■□□□□ 0.11
CALCOCO2-225ENST00000570513 CC2D1BQ5T0F9 858 aaKnown RBP15.74■□□□□ 0.11
CALCOCO2-225ENST00000570513 SSH2Q76I76 1423 aa15.74■□□□□ 0.11
CALCOCO2-225ENST00000570513 NSD2O96028 1365 aa15.74■□□□□ 0.11
CALCOCO2-225ENST00000570513 PARD3Q8TEW0 1356 aa15.74■□□□□ 0.11
CALCOCO2-225ENST00000570513 MIER1Q8N108 512 aa15.73■□□□□ 0.11
CALCOCO2-225ENST00000570513 ANKRD26Q9UPS8 1709 aa15.73■□□□□ 0.11
CALCOCO2-225ENST00000570513 IQSEC2Q5JU85 1478 aa15.72■□□□□ 0.11
CALCOCO2-225ENST00000570513 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.72■□□□□ 0.11
CALCOCO2-225ENST00000570513 ZNF692Q9BU19 519 aaPredicted RBP15.72■□□□□ 0.11
CALCOCO2-225ENST00000570513 PRKRIP1Q9H875 184 aaPredicted RBP15.72■□□□□ 0.11
CALCOCO2-225ENST00000570513 PIK3C2AO00443 1686 aa15.71■□□□□ 0.11
CALCOCO2-225ENST00000570513 TRPM3Q9HCF6 1732 aaPredicted RBP15.71■□□□□ 0.1
CALCOCO2-225ENST00000570513 TTC21BQ7Z4L5 1316 aa15.7■□□□□ 0.1
CALCOCO2-225ENST00000570513 BRINP3Q76B58 766 aa15.7■□□□□ 0.1
CALCOCO2-225ENST00000570513 SLAIN2Q9P270 581 aa15.7■□□□□ 0.1
CALCOCO2-225ENST00000570513 C1QBPQ07021 282 aaKnown RBP15.69■□□□□ 0.1
CALCOCO2-225ENST00000570513 NME9Q86XW9 330 aa15.69■□□□□ 0.1
CALCOCO2-225ENST00000570513 PXDNQ92626 1479 aa15.69■□□□□ 0.1
CALCOCO2-225ENST00000570513 ROBO1Q9Y6N7 1651 aa15.69■□□□□ 0.1
CALCOCO2-225ENST00000570513 NHSL1Q5SYE7 1610 aa15.68■□□□□ 0.1
CALCOCO2-225ENST00000570513 BRD4O60885 1362 aaPredicted RBP15.68■□□□□ 0.1
CALCOCO2-225ENST00000570513 FOXO3O43524 673 aa15.68■□□□□ 0.1
CALCOCO2-225ENST00000570513 XPCQ01831 940 aaPredicted RBP15.68■□□□□ 0.1
CALCOCO2-225ENST00000570513 OVOS2A0A0J9YW53 1432 aa15.68■□□□□ 0.1
CALCOCO2-225ENST00000570513 OVOS2Q6IE36 1432 aa15.68■□□□□ 0.1
CALCOCO2-225ENST00000570513 TTC21AQ8NDW8 1320 aa15.68■□□□□ 0.1
CALCOCO2-225ENST00000570513 FYB1O15117 783 aa15.67■□□□□ 0.1
CALCOCO2-225ENST00000570513 RALBP1Q15311 655 aa15.67■□□□□ 0.1
CALCOCO2-225ENST00000570513 GGNBP2Q9H3C7 697 aa15.67■□□□□ 0.1
CALCOCO2-225ENST00000570513 NPHP3Q7Z494 1330 aa15.67■□□□□ 0.1
CALCOCO2-225ENST00000570513 USP54Q70EL1 1684 aa15.67■□□□□ 0.1
CALCOCO2-225ENST00000570513 PSME1Q06323 249 aa15.66■□□□□ 0.1
CALCOCO2-225ENST00000570513 DDX17Q92841 729 aaKnown RBP15.66■□□□□ 0.1
CALCOCO2-225ENST00000570513 ZRANB1Q9UGI0 708 aa15.65■□□□□ 0.1
CALCOCO2-225ENST00000570513 MARF1Q9Y4F3 1742 aaKnown RBP15.65■□□□□ 0.1
CALCOCO2-225ENST00000570513 MYBBP1AQ9BQG0 1328 aaKnown RBP15.65■□□□□ 0.1
CALCOCO2-225ENST00000570513 AHDC1Q5TGY3 1603 aaPredicted RBP15.65■□□□□ 0.1
CALCOCO2-225ENST00000570513 ALS2Q96Q42 1657 aa15.64■□□□□ 0.09
CALCOCO2-225ENST00000570513 PAK3O75914 559 aaPredicted RBP15.64■□□□□ 0.09
CALCOCO2-225ENST00000570513 TNS3Q68CZ2 1445 aa15.64■□□□□ 0.09
CALCOCO2-225ENST00000570513 MORC1Q86VD1 984 aa15.64■□□□□ 0.09
CALCOCO2-225ENST00000570513 CERKQ8TCT0 537 aa15.64■□□□□ 0.09
CALCOCO2-225ENST00000570513 SBNO1A3KN83 1393 aa15.63■□□□□ 0.09
CALCOCO2-225ENST00000570513 KRT28Q7Z3Y7 464 aa15.63■□□□□ 0.09
CALCOCO2-225ENST00000570513 USP31Q70CQ4 1352 aa15.62■□□□□ 0.09
CALCOCO2-225ENST00000570513 UBAP1LF5GYI3 381 aa15.61■□□□□ 0.09
CALCOCO2-225ENST00000570513 PPP2R1AP30153 589 aa15.61■□□□□ 0.09
CALCOCO2-225ENST00000570513 TNNT2P45379 298 aaPredicted RBP15.61■□□□□ 0.09
CALCOCO2-225ENST00000570513 COG3Q96JB2 828 aa15.61■□□□□ 0.09
CALCOCO2-225ENST00000570513 CCER2I3L3R5 266 aa15.6■□□□□ 0.09
CALCOCO2-225ENST00000570513 TOM1O60784 492 aa15.6■□□□□ 0.09
CALCOCO2-225ENST00000570513 NUTM2GQ5VZR2 741 aa15.6■□□□□ 0.09
CALCOCO2-225ENST00000570513 MED1Q15648 1581 aaPredicted RBP15.6■□□□□ 0.09
CALCOCO2-225ENST00000570513 SOS2Q07890 1332 aaPredicted RBP15.6■□□□□ 0.09
CALCOCO2-225ENST00000570513 SLIT3O75094 1523 aa15.59■□□□□ 0.09
CALCOCO2-225ENST00000570513 NLRP13Q86W25 1043 aa15.59■□□□□ 0.09
CALCOCO2-225ENST00000570513 ABTB2Q8N961 1025 aa15.59■□□□□ 0.09
CALCOCO2-225ENST00000570513 PIP4K2BP78356 416 aa15.58■□□□□ 0.08
CALCOCO2-225ENST00000570513 CCDC184Q52MB2 194 aa15.58■□□□□ 0.08
CALCOCO2-225ENST00000570513 SMG6Q86US8 1419 aaKnown RBP15.58■□□□□ 0.08
CALCOCO2-225ENST00000570513 NFAT5O94916 1531 aa15.58■□□□□ 0.08
CALCOCO2-225ENST00000570513 COL16A1Q07092 1604 aaPredicted RBP15.57■□□□□ 0.08
CALCOCO2-225ENST00000570513 NLRP6P59044 892 aa15.57■□□□□ 0.08
CALCOCO2-225ENST00000570513 LMOD2Q6P5Q4 547 aa15.57■□□□□ 0.08
CALCOCO2-225ENST00000570513 MRS2Q9HD23 443 aa15.57■□□□□ 0.08
CALCOCO2-225ENST00000570513 SPATA31A3Q5VYP0 1347 aa15.57■□□□□ 0.08
CALCOCO2-225ENST00000570513 ARHGEF10O15013 1369 aa15.57■□□□□ 0.08
CALCOCO2-225ENST00000570513 PHRF1Q9P1Y6 1649 aaKnown RBP15.57■□□□□ 0.08
CALCOCO2-225ENST00000570513 CRYBG1Q9Y4K1 1723 aa15.57■□□□□ 0.08
CALCOCO2-225ENST00000570513 USP19O94966 1318 aa15.56■□□□□ 0.08
CALCOCO2-225ENST00000570513 AATKQ6ZMQ8 1374 aa15.56■□□□□ 0.08
CALCOCO2-225ENST00000570513 PHLPP1O60346 1717 aa15.56■□□□□ 0.08
CALCOCO2-225ENST00000570513 SOX12O15370 315 aa15.55■□□□□ 0.08
CALCOCO2-225ENST00000570513 ABCA3Q99758 1704 aa15.54■□□□□ 0.08
CALCOCO2-225ENST00000570513 CDK12Q9NYV4 1490 aaPredicted RBP15.54■□□□□ 0.08
CALCOCO2-225ENST00000570513 PEAK1Q9H792 1746 aa15.54■□□□□ 0.08
CALCOCO2-225ENST00000570513 COL3A1P02461 1466 aaPredicted RBP15.53■□□□□ 0.08
CALCOCO2-225ENST00000570513 PLEKHG5O94827 1062 aa15.53■□□□□ 0.08
CALCOCO2-225ENST00000570513 FBLN1P23142 703 aa15.53■□□□□ 0.08
CALCOCO2-225ENST00000570513 MTHFSP49914 203 aa15.52■□□□□ 0.08
CALCOCO2-225ENST00000570513 RRS1Q15050 365 aaKnown RBP15.52■□□□□ 0.08
CALCOCO2-225ENST00000570513 EMILIN1Q9Y6C2 1016 aa15.52■□□□□ 0.08
CALCOCO2-225ENST00000570513 POLKQ9UBT6 870 aa15.51■□□□□ 0.07
CALCOCO2-225ENST00000570513 SHPRHQ149N8 1683 aa15.51■□□□□ 0.07
CALCOCO2-225ENST00000570513 COL22A1Q8NFW1 1626 aaPredicted RBP15.5■□□□□ 0.07
CALCOCO2-225ENST00000570513 PNPLA6Q8IY17 1366 aa15.49■□□□□ 0.07
CALCOCO2-225ENST00000570513 LTN1O94822 1766 aa15.49■□□□□ 0.07
CALCOCO2-225ENST00000570513 MAP3K19Q56UN5 1328 aa15.49■□□□□ 0.07
CALCOCO2-225ENST00000570513 RTL1A6NKG5 1358 aa15.49■□□□□ 0.07
CALCOCO2-225ENST00000570513 PPM1GO15355 546 aaPredicted RBP15.48■□□□□ 0.07
CALCOCO2-225ENST00000570513 KCNH5Q8NCM2 988 aa15.48■□□□□ 0.07
CALCOCO2-225ENST00000570513 CABLES1Q8TDN4 633 aa15.48■□□□□ 0.07
CALCOCO2-225ENST00000570513 CFAP53Q96M91 514 aa15.48■□□□□ 0.07
CALCOCO2-225ENST00000570513 FLT4P35916 1363 aa15.48■□□□□ 0.07
CALCOCO2-225ENST00000570513 MAP2P11137 1827 aaKnown RBP15.47■□□□□ 0.07
CALCOCO2-225ENST00000570513 GCP02774 474 aa15.47■□□□□ 0.07
CALCOCO2-225ENST00000570513 LRRC59Q96AG4 307 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms