RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-231ENST00000568626 SBNO1A3KN83 1393 aa16.55■□□□□ 0.24
FANCA-231ENST00000568626 SOS2Q07890 1332 aaPredicted RBP16.55■□□□□ 0.24
FANCA-231ENST00000568626 PSME1Q06323 249 aa16.55■□□□□ 0.24
FANCA-231ENST00000568626 SSH2Q76I76 1423 aa16.54■□□□□ 0.24
FANCA-231ENST00000568626 TNS3Q68CZ2 1445 aa16.53■□□□□ 0.24
FANCA-231ENST00000568626 TTC21AQ8NDW8 1320 aa16.52■□□□□ 0.24
FANCA-231ENST00000568626 KRT28Q7Z3Y7 464 aa16.52■□□□□ 0.24
FANCA-231ENST00000568626 ALS2Q96Q42 1657 aa16.52■□□□□ 0.23
FANCA-231ENST00000568626 NSD3Q9BZ95 1437 aa16.52■□□□□ 0.23
FANCA-231ENST00000568626 PANK3Q9H999 370 aa16.51■□□□□ 0.23
FANCA-231ENST00000568626 KIF20BQ96Q89 1820 aa16.51■□□□□ 0.23
FANCA-231ENST00000568626 ARHGEF10O15013 1369 aa16.51■□□□□ 0.23
FANCA-231ENST00000568626 USP54Q70EL1 1684 aa16.5■□□□□ 0.23
FANCA-231ENST00000568626 PIK3C2AO00443 1686 aa16.5■□□□□ 0.23
FANCA-231ENST00000568626 TTC21BQ7Z4L5 1316 aa16.49■□□□□ 0.23
FANCA-231ENST00000568626 DDX17Q92841 729 aaKnown RBP16.49■□□□□ 0.23
FANCA-231ENST00000568626 NSD2O96028 1365 aa16.49■□□□□ 0.23
FANCA-231ENST00000568626 SPATA31A3Q5VYP0 1347 aa16.48■□□□□ 0.23
FANCA-231ENST00000568626 XPCQ01831 940 aaPredicted RBP16.48■□□□□ 0.23
FANCA-231ENST00000568626 LRRC59Q96AG4 307 aaKnown RBP16.48■□□□□ 0.23
FANCA-231ENST00000568626 SHPRHQ149N8 1683 aa16.48■□□□□ 0.23
FANCA-231ENST00000568626 COL22A1Q8NFW1 1626 aaPredicted RBP16.48■□□□□ 0.23
FANCA-231ENST00000568626 CGNL1Q0VF96 1302 aa16.47■□□□□ 0.23
FANCA-231ENST00000568626 KNSTRNQ9Y448 316 aa16.47■□□□□ 0.23
FANCA-231ENST00000568626 ANKRD26Q9UPS8 1709 aa16.47■□□□□ 0.23
FANCA-231ENST00000568626 PAK3O75914 559 aaPredicted RBP16.46■□□□□ 0.23
FANCA-231ENST00000568626 CARD14Q9BXL6 1004 aa16.46■□□□□ 0.23
FANCA-231ENST00000568626 RGS17Q9UGC6 210 aaPredicted RBP16.46■□□□□ 0.23
FANCA-231ENST00000568626 DDX10Q13206 875 aaKnown RBP16.45■□□□□ 0.22
FANCA-231ENST00000568626 USP31Q70CQ4 1352 aa16.45■□□□□ 0.22
FANCA-231ENST00000568626 JCADQ9P266 1359 aa16.45■□□□□ 0.22
FANCA-231ENST00000568626 NPC1L1Q9UHC9 1359 aa16.45■□□□□ 0.22
FANCA-231ENST00000568626 PER1O15534 1290 aaPredicted RBP16.44■□□□□ 0.22
FANCA-231ENST00000568626 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.44■□□□□ 0.22
FANCA-231ENST00000568626 ABTB2Q8N961 1025 aa16.44■□□□□ 0.22
FANCA-231ENST00000568626 OVOS2A0A0J9YW53 1432 aa16.44■□□□□ 0.22
FANCA-231ENST00000568626 OVOS2Q6IE36 1432 aa16.44■□□□□ 0.22
FANCA-231ENST00000568626 PNPLA6Q8IY17 1366 aa16.43■□□□□ 0.22
FANCA-231ENST00000568626 CRYBG1Q9Y4K1 1723 aa16.43■□□□□ 0.22
FANCA-231ENST00000568626 ABCA3Q99758 1704 aa16.42■□□□□ 0.22
FANCA-231ENST00000568626 MARF1Q9Y4F3 1742 aaKnown RBP16.42■□□□□ 0.22
FANCA-231ENST00000568626 PHRF1Q9P1Y6 1649 aaKnown RBP16.42■□□□□ 0.22
FANCA-231ENST00000568626 SLIT3O75094 1523 aa16.41■□□□□ 0.22
FANCA-231ENST00000568626 AMER1Q5JTC6 1135 aaPredicted RBP16.41■□□□□ 0.22
FANCA-231ENST00000568626 LMOD2Q6P5Q4 547 aa16.41■□□□□ 0.22
FANCA-231ENST00000568626 NLRP13Q86W25 1043 aa16.41■□□□□ 0.22
FANCA-231ENST00000568626 NME9Q86XW9 330 aa16.41■□□□□ 0.22
FANCA-231ENST00000568626 USP19O94966 1318 aa16.41■□□□□ 0.22
FANCA-231ENST00000568626 FYB1O15117 783 aa16.4■□□□□ 0.22
FANCA-231ENST00000568626 COG3Q96JB2 828 aa16.4■□□□□ 0.22
FANCA-231ENST00000568626 NLRP6P59044 892 aa16.39■□□□□ 0.21
FANCA-231ENST00000568626 SPATA31A6Q5VVP1 1343 aa16.38■□□□□ 0.21
FANCA-231ENST00000568626 KCNH5Q8NCM2 988 aa16.37■□□□□ 0.21
FANCA-231ENST00000568626 GGNBP2Q9H3C7 697 aa16.37■□□□□ 0.21
FANCA-231ENST00000568626 NFAT5O94916 1531 aa16.36■□□□□ 0.21
FANCA-231ENST00000568626 POTEAQ6S8J7 498 aa16.36■□□□□ 0.21
FANCA-231ENST00000568626 NUTM2GQ5VZR2 741 aa16.35■□□□□ 0.21
FANCA-231ENST00000568626 HAP1P54257 671 aaPredicted RBP16.34■□□□□ 0.21
FANCA-231ENST00000568626 ABCC6O95255 1503 aa16.34■□□□□ 0.21
FANCA-231ENST00000568626 CC2D1BQ5T0F9 858 aaKnown RBP16.33■□□□□ 0.2
FANCA-231ENST00000568626 MORC1Q86VD1 984 aa16.33■□□□□ 0.2
FANCA-231ENST00000568626 ZRANB1Q9UGI0 708 aa16.33■□□□□ 0.2
FANCA-231ENST00000568626 AATKQ6ZMQ8 1374 aa16.33■□□□□ 0.2
FANCA-231ENST00000568626 CPDO75976 1380 aa16.32■□□□□ 0.2
FANCA-231ENST00000568626 PARD3Q8TEW0 1356 aa16.32■□□□□ 0.2
FANCA-231ENST00000568626 LTN1O94822 1766 aa16.31■□□□□ 0.2
FANCA-231ENST00000568626 GCP02774 474 aa16.31■□□□□ 0.2
FANCA-231ENST00000568626 KIF24Q5T7B8 1368 aa16.3■□□□□ 0.2
FANCA-231ENST00000568626 RALBP1Q15311 655 aa16.3■□□□□ 0.2
FANCA-231ENST00000568626 CABLES1Q8TDN4 633 aa16.3■□□□□ 0.2
FANCA-231ENST00000568626 SMG6Q86US8 1419 aaKnown RBP16.29■□□□□ 0.2
FANCA-231ENST00000568626 RTL1A6NKG5 1358 aa16.29■□□□□ 0.2
FANCA-231ENST00000568626 COL14A1Q05707 1796 aaKnown RBP16.29■□□□□ 0.2
FANCA-231ENST00000568626 LRP6O75581 1613 aa16.29■□□□□ 0.2
FANCA-231ENST00000568626 KIAA0232Q92628 1395 aa16.27■□□□□ 0.2
FANCA-231ENST00000568626 ANP32CO43423 234 aa16.27■□□□□ 0.2
FANCA-231ENST00000568626 PLEKHG5O94827 1062 aa16.27■□□□□ 0.2
FANCA-231ENST00000568626 SOX12O15370 315 aa16.26■□□□□ 0.19
FANCA-231ENST00000568626 ARHGEF25Q86VW2 580 aa16.26■□□□□ 0.19
FANCA-231ENST00000568626 PRKRIP1Q9H875 184 aaPredicted RBP16.26■□□□□ 0.19
FANCA-231ENST00000568626 PRDM11Q9NQV5 511 aa16.26■□□□□ 0.19
FANCA-231ENST00000568626 CDK12Q9NYV4 1490 aaPredicted RBP16.26■□□□□ 0.19
FANCA-231ENST00000568626 LMO7Q8WWI1 1683 aa16.26■□□□□ 0.19
FANCA-231ENST00000568626 MAP2P11137 1827 aaKnown RBP16.26■□□□□ 0.19
FANCA-231ENST00000568626 NWD2Q9ULI1 1742 aa16.25■□□□□ 0.19
FANCA-231ENST00000568626 NUTM2BA6NNL0 878 aaPredicted RBP16.25■□□□□ 0.19
FANCA-231ENST00000568626 NUTM2EB1AL46 878 aaPredicted RBP16.25■□□□□ 0.19
FANCA-231ENST00000568626 NUTM2AQ8IVF1 878 aaPredicted RBP16.25■□□□□ 0.19
FANCA-231ENST00000568626 BLMP54132 1417 aaPredicted RBP16.25■□□□□ 0.19
FANCA-231ENST00000568626 FLT4P35916 1363 aa16.25■□□□□ 0.19
FANCA-231ENST00000568626 PLCH1Q4KWH8 1693 aa16.24■□□□□ 0.19
FANCA-231ENST00000568626 MAP3K19Q56UN5 1328 aa16.24■□□□□ 0.19
FANCA-231ENST00000568626 TNNT2P45379 298 aaPredicted RBP16.24■□□□□ 0.19
FANCA-231ENST00000568626 CNGB1Q14028 1251 aaPredicted RBP16.24■□□□□ 0.19
FANCA-231ENST00000568626 DIEXFQ68CQ4 756 aaKnown RBP16.24■□□□□ 0.19
FANCA-231ENST00000568626 COL18A1P39060 1754 aa16.23■□□□□ 0.19
FANCA-231ENST00000568626 MYBBP1AQ9BQG0 1328 aaKnown RBP16.23■□□□□ 0.19
FANCA-231ENST00000568626 PEAK1Q9H792 1746 aa16.23■□□□□ 0.19
FANCA-231ENST00000568626 ADAMTS2O95450 1211 aa16.23■□□□□ 0.19
FANCA-231ENST00000568626 ZC3H6P61129 1189 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms