RNA–Protein interactions for RNA: ENST00000566901.5

CFDP1-207, Transcript of craniofacial development protein 1, humanhuman

TSL 1 (best)

Gene CFDP1, Length 1,167 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-207ENST00000566901 NSD2O96028 1365 aa17.07■□□□□ 0.32
CFDP1-207ENST00000566901 AMER1Q5JTC6 1135 aaPredicted RBP17.07■□□□□ 0.32
CFDP1-207ENST00000566901 SLC12A5Q9H2X9 1139 aa17.07■□□□□ 0.32
CFDP1-207ENST00000566901 TERF2IPQ9NYB0 399 aa17.07■□□□□ 0.32
CFDP1-207ENST00000566901 NSD3Q9BZ95 1437 aa17.06■□□□□ 0.32
CFDP1-207ENST00000566901 A0A1W2PP64 1363 aa17.06■□□□□ 0.32
CFDP1-207ENST00000566901 NUTM2BA6NNL0 878 aaPredicted RBP17.06■□□□□ 0.32
CFDP1-207ENST00000566901 NUTM2EB1AL46 878 aaPredicted RBP17.06■□□□□ 0.32
CFDP1-207ENST00000566901 ZNF772Q68DY9 489 aaPredicted RBP17.06■□□□□ 0.32
CFDP1-207ENST00000566901 NUTM2AQ8IVF1 878 aaPredicted RBP17.06■□□□□ 0.32
CFDP1-207ENST00000566901 TMC1Q8TDI8 760 aa17.06■□□□□ 0.32
CFDP1-207ENST00000566901 CCDC61Q9Y6R9 512 aa17.06■□□□□ 0.32
CFDP1-207ENST00000566901 CPSF1Q10570 1443 aaKnown RBP17.05■□□□□ 0.32
CFDP1-207ENST00000566901 PPIP5K1Q6PFW1 1433 aa17.05■□□□□ 0.32
CFDP1-207ENST00000566901 NUDT16Q96DE0 195 aaKnown RBP17.05■□□□□ 0.32
CFDP1-207ENST00000566901 DCCP43146 1447 aa17.04■□□□□ 0.32
CFDP1-207ENST00000566901 PRR36Q9H6K5 1346 aa17.04■□□□□ 0.32
CFDP1-207ENST00000566901 AKAP12Q02952 1782 aa17.04■□□□□ 0.32
CFDP1-207ENST00000566901 MON2Q7Z3U7 1717 aa17.04■□□□□ 0.32
CFDP1-207ENST00000566901 HDGFL2Q7Z4V5 671 aaPredicted RBP17.03■□□□□ 0.32
CFDP1-207ENST00000566901 CARD14Q9BXL6 1004 aa17.03■□□□□ 0.32
CFDP1-207ENST00000566901 CGNL1Q0VF96 1302 aa17.02■□□□□ 0.32
CFDP1-207ENST00000566901 MYBBP1AQ9BQG0 1328 aaKnown RBP17.02■□□□□ 0.32
CFDP1-207ENST00000566901 BRINP3Q76B58 766 aa17.02■□□□□ 0.32
CFDP1-207ENST00000566901 PLEKHG3A1L390 1219 aa17.01■□□□□ 0.31
CFDP1-207ENST00000566901 CABP1Q9NZU7 370 aa17.01■□□□□ 0.31
CFDP1-207ENST00000566901 EDC4Q6P2E9 1401 aaKnown RBP17.01■□□□□ 0.31
CFDP1-207ENST00000566901 NHSL1Q5SYE7 1610 aa17■□□□□ 0.31
CFDP1-207ENST00000566901 ANKRD26Q9UPS8 1709 aa17■□□□□ 0.31
CFDP1-207ENST00000566901 BRD4O60885 1362 aaPredicted RBP17■□□□□ 0.31
CFDP1-207ENST00000566901 NRKQ7Z2Y5 1582 aa16.99■□□□□ 0.31
CFDP1-207ENST00000566901 POLR3AO14802 1390 aaPredicted RBP16.99■□□□□ 0.31
CFDP1-207ENST00000566901 ZNF692Q9BU19 519 aaPredicted RBP16.98■□□□□ 0.31
CFDP1-207ENST00000566901 KIF20BQ96Q89 1820 aa16.98■□□□□ 0.31
CFDP1-207ENST00000566901 MST1RQ04912 1400 aa16.97■□□□□ 0.31
CFDP1-207ENST00000566901 RXRBP28702 533 aa16.97■□□□□ 0.31
CFDP1-207ENST00000566901 NLRP13Q86W25 1043 aa16.97■□□□□ 0.31
CFDP1-207ENST00000566901 AFF2P51816 1311 aa16.96■□□□□ 0.31
CFDP1-207ENST00000566901 CC2D1BQ5T0F9 858 aaKnown RBP16.96■□□□□ 0.31
CFDP1-207ENST00000566901 USP6P35125 1406 aa16.95■□□□□ 0.3
CFDP1-207ENST00000566901 C8orf37Q96NL8 207 aa16.94■□□□□ 0.3
CFDP1-207ENST00000566901 KIF1AQ12756 1690 aa16.94■□□□□ 0.3
CFDP1-207ENST00000566901 RGPD8O14715 1765 aaPredicted RBP16.93■□□□□ 0.3
CFDP1-207ENST00000566901 ZBTB22O15209 634 aa16.93■□□□□ 0.3
CFDP1-207ENST00000566901 CAPN15O75808 1086 aa16.93■□□□□ 0.3
CFDP1-207ENST00000566901 UPF1Q92900 1129 aaKnown RBP eCLIP16.93■□□□□ 0.3
CFDP1-207ENST00000566901 LRRC59Q96AG4 307 aaKnown RBP16.93■□□□□ 0.3
CFDP1-207ENST00000566901 SSH2Q76I76 1423 aa16.93■□□□□ 0.3
CFDP1-207ENST00000566901 DDX17Q92841 729 aaKnown RBP16.92■□□□□ 0.3
CFDP1-207ENST00000566901 ACEP12821 1306 aa16.92■□□□□ 0.3
CFDP1-207ENST00000566901 MRS2Q9HD23 443 aa16.91■□□□□ 0.3
CFDP1-207ENST00000566901 FOXD4L1Q9NU39 408 aa16.91■□□□□ 0.3
CFDP1-207ENST00000566901 MYCNP04198 464 aaPredicted RBP16.9■□□□□ 0.3
CFDP1-207ENST00000566901 C1orf167Q5SNV9 1468 aa16.9■□□□□ 0.3
CFDP1-207ENST00000566901 USP54Q70EL1 1684 aa16.9■□□□□ 0.3
CFDP1-207ENST00000566901 TTC21AQ8NDW8 1320 aa16.9■□□□□ 0.3
CFDP1-207ENST00000566901 PNPLA6Q8IY17 1366 aa16.89■□□□□ 0.3
CFDP1-207ENST00000566901 CDK12Q9NYV4 1490 aaPredicted RBP16.89■□□□□ 0.29
CFDP1-207ENST00000566901 FYB1O15117 783 aa16.89■□□□□ 0.29
CFDP1-207ENST00000566901 PPP2R1AP30153 589 aa16.89■□□□□ 0.29
CFDP1-207ENST00000566901 DSG3P32926 999 aa16.89■□□□□ 0.29
CFDP1-207ENST00000566901 ADAMTS2O95450 1211 aa16.88■□□□□ 0.29
CFDP1-207ENST00000566901 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
CFDP1-207ENST00000566901 PHF8Q9UPP1 1060 aa16.88■□□□□ 0.29
CFDP1-207ENST00000566901 INSRP06213 1382 aa16.88■□□□□ 0.29
CFDP1-207ENST00000566901 NUTM2FA1L443 756 aa16.87■□□□□ 0.29
CFDP1-207ENST00000566901 TTC21BQ7Z4L5 1316 aa16.87■□□□□ 0.29
CFDP1-207ENST00000566901 OVOS2A0A0J9YW53 1432 aa16.87■□□□□ 0.29
CFDP1-207ENST00000566901 OVOS2Q6IE36 1432 aa16.87■□□□□ 0.29
CFDP1-207ENST00000566901 CCDC184Q52MB2 194 aa16.86■□□□□ 0.29
CFDP1-207ENST00000566901 NGDNQ8NEJ9 315 aaKnown RBP16.86■□□□□ 0.29
CFDP1-207ENST00000566901 NGLY1Q96IV0 654 aa16.86■□□□□ 0.29
CFDP1-207ENST00000566901 QTRT2Q9H974 415 aaKnown RBP16.86■□□□□ 0.29
CFDP1-207ENST00000566901 RGS12O14924 1447 aa16.86■□□□□ 0.29
CFDP1-207ENST00000566901 RBM6P78332 1123 aaKnown RBP16.85■□□□□ 0.29
CFDP1-207ENST00000566901 CNGB1Q14028 1251 aaPredicted RBP16.85■□□□□ 0.29
CFDP1-207ENST00000566901 USP31Q70CQ4 1352 aa16.85■□□□□ 0.29
CFDP1-207ENST00000566901 AATKQ6ZMQ8 1374 aa16.84■□□□□ 0.29
CFDP1-207ENST00000566901 PIK3C2AO00443 1686 aa16.83■□□□□ 0.28
CFDP1-207ENST00000566901 SAMD1Q6SPF0 538 aaPredicted RBP16.83■□□□□ 0.28
CFDP1-207ENST00000566901 SMG6Q86US8 1419 aaKnown RBP16.83■□□□□ 0.28
CFDP1-207ENST00000566901 PMFBP1Q8TBY8 1022 aa16.83■□□□□ 0.28
CFDP1-207ENST00000566901 PNISRQ8TF01 805 aaKnown RBP16.83■□□□□ 0.28
CFDP1-207ENST00000566901 GGNBP2Q9H3C7 697 aa16.83■□□□□ 0.28
CFDP1-207ENST00000566901 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.82■□□□□ 0.28
CFDP1-207ENST00000566901 ORAI2Q96SN7 254 aa16.82■□□□□ 0.28
CFDP1-207ENST00000566901 ESCO1Q5FWF5 840 aa16.81■□□□□ 0.28
CFDP1-207ENST00000566901 NME9Q86XW9 330 aa16.81■□□□□ 0.28
CFDP1-207ENST00000566901 TRPM3Q9HCF6 1732 aaPredicted RBP16.8■□□□□ 0.28
CFDP1-207ENST00000566901 COG3Q96JB2 828 aa16.8■□□□□ 0.28
CFDP1-207ENST00000566901 USP21Q9UK80 565 aa16.79■□□□□ 0.28
CFDP1-207ENST00000566901 MARF1Q9Y4F3 1742 aaKnown RBP16.77■□□□□ 0.28
CFDP1-207ENST00000566901 COL3A1P02461 1466 aaPredicted RBP16.77■□□□□ 0.28
CFDP1-207ENST00000566901 SOS2Q07890 1332 aaPredicted RBP16.76■□□□□ 0.27
CFDP1-207ENST00000566901 CFAP53Q96M91 514 aa16.76■□□□□ 0.27
CFDP1-207ENST00000566901 TRPC5Q9UL62 973 aaPredicted RBP16.76■□□□□ 0.27
CFDP1-207ENST00000566901 COL22A1Q8NFW1 1626 aaPredicted RBP16.76■□□□□ 0.27
CFDP1-207ENST00000566901 BLMP54132 1417 aaPredicted RBP16.76■□□□□ 0.27
CFDP1-207ENST00000566901 SBNO1A3KN83 1393 aa16.76■□□□□ 0.27
CFDP1-207ENST00000566901 NPHP3Q7Z494 1330 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms