RNA–Protein interactions for RNA: ENST00000566480.5

SCAMP2-207, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 2,476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-207ENST00000566480 NUTM2FA1L443 756 aa15.89■□□□□ 0.13
SCAMP2-207ENST00000566480 NGEFQ8N5V2 710 aa15.89■□□□□ 0.13
SCAMP2-207ENST00000566480 ZRANB1Q9UGI0 708 aa15.89■□□□□ 0.13
SCAMP2-207ENST00000566480 CANXP27824 592 aaKnown RBP15.89■□□□□ 0.13
SCAMP2-207ENST00000566480 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.89■□□□□ 0.13
SCAMP2-207ENST00000566480 PANK1Q8TE04 598 aa15.89■□□□□ 0.13
SCAMP2-207ENST00000566480 WASLO00401 505 aaPredicted RBP15.88■□□□□ 0.13
SCAMP2-207ENST00000566480 ADRA2BP18089 450 aa15.88■□□□□ 0.13
SCAMP2-207ENST00000566480 NPM2Q86SE8 214 aaKnown RBP15.88■□□□□ 0.13
SCAMP2-207ENST00000566480 LTKP29376 864 aa15.87■□□□□ 0.13
SCAMP2-207ENST00000566480 TSR2Q969E8 191 aaKnown RBP15.87■□□□□ 0.13
SCAMP2-207ENST00000566480 TNNQ9UQP3 1299 aa15.87■□□□□ 0.13
SCAMP2-207ENST00000566480 TCERG1O14776 1098 aaKnown RBP15.87■□□□□ 0.13
SCAMP2-207ENST00000566480 PLEKHF1Q96S99 279 aa15.87■□□□□ 0.13
SCAMP2-207ENST00000566480 COG6Q9Y2V7 657 aa15.87■□□□□ 0.13
SCAMP2-207ENST00000566480 NME9Q86XW9 330 aa15.86■□□□□ 0.13
SCAMP2-207ENST00000566480 KDM2BQ8NHM5 1336 aa15.86■□□□□ 0.13
SCAMP2-207ENST00000566480 DIAPH1O60610 1272 aaKnown RBP15.86■□□□□ 0.13
SCAMP2-207ENST00000566480 PDE4AP27815 886 aa15.86■□□□□ 0.13
SCAMP2-207ENST00000566480 ERICH6Q7L0X2 663 aa15.86■□□□□ 0.13
SCAMP2-207ENST00000566480 PPIP5K1Q6PFW1 1433 aa15.86■□□□□ 0.13
SCAMP2-207ENST00000566480 WDR63Q8IWG1 891 aa15.85■□□□□ 0.13
SCAMP2-207ENST00000566480 NUDT16Q96DE0 195 aaKnown RBP15.85■□□□□ 0.13
SCAMP2-207ENST00000566480 SLC26A8Q96RN1 970 aa15.85■□□□□ 0.13
SCAMP2-207ENST00000566480 DLC1Q96QB1 1528 aa15.85■□□□□ 0.13
SCAMP2-207ENST00000566480 TMEM2Q9UHN6 1383 aa15.85■□□□□ 0.13
SCAMP2-207ENST00000566480 COL3A1P02461 1466 aaPredicted RBP15.85■□□□□ 0.13
SCAMP2-207ENST00000566480 RARSP54136 660 aaKnown RBP15.85■□□□□ 0.13
SCAMP2-207ENST00000566480 TMPOP42166 694 aaKnown RBP15.84■□□□□ 0.13
SCAMP2-207ENST00000566480 POLKQ9UBT6 870 aa15.84■□□□□ 0.13
SCAMP2-207ENST00000566480 EMILIN1Q9Y6C2 1016 aa15.84■□□□□ 0.13
SCAMP2-207ENST00000566480 MAPK8IP3Q9UPT6 1336 aa15.84■□□□□ 0.13
SCAMP2-207ENST00000566480 CLUAP1Q96AJ1 413 aa15.84■□□□□ 0.13
SCAMP2-207ENST00000566480 HDGFP51858 240 aaKnown RBP15.83■□□□□ 0.12
SCAMP2-207ENST00000566480 CCDC27Q2M243 656 aa15.83■□□□□ 0.12
SCAMP2-207ENST00000566480 ANKRD26Q9UPS8 1709 aa15.83■□□□□ 0.12
SCAMP2-207ENST00000566480 HMOX1P09601 288 aa15.83■□□□□ 0.12
SCAMP2-207ENST00000566480 TRIM35Q9UPQ4 493 aa15.83■□□□□ 0.12
SCAMP2-207ENST00000566480 KIF20BQ96Q89 1820 aa15.82■□□□□ 0.12
SCAMP2-207ENST00000566480 STRCP1A6NGW2 1772 aa15.82■□□□□ 0.12
SCAMP2-207ENST00000566480 ROBO2Q9HCK4 1378 aa15.82■□□□□ 0.12
SCAMP2-207ENST00000566480 PAK3O75914 559 aaPredicted RBP15.82■□□□□ 0.12
SCAMP2-207ENST00000566480 RIPK4P57078 832 aa15.82■□□□□ 0.12
SCAMP2-207ENST00000566480 CENPQQ7L2Z9 268 aaPredicted RBP15.82■□□□□ 0.12
SCAMP2-207ENST00000566480 RLBP1P12271 317 aa15.81■□□□□ 0.12
SCAMP2-207ENST00000566480 ANP32AP39687 249 aaKnown RBP15.81■□□□□ 0.12
SCAMP2-207ENST00000566480 RGS3P49796 1198 aa15.81■□□□□ 0.12
SCAMP2-207ENST00000566480 RRS1Q15050 365 aaKnown RBP15.81■□□□□ 0.12
SCAMP2-207ENST00000566480 BACH2Q9BYV9 841 aa15.81■□□□□ 0.12
SCAMP2-207ENST00000566480 PRR36Q9H6K5 1346 aa15.81■□□□□ 0.12
SCAMP2-207ENST00000566480 MED14O60244 1454 aa15.81■□□□□ 0.12
SCAMP2-207ENST00000566480 IGHDP01880 384 aa15.8■□□□□ 0.12
SCAMP2-207ENST00000566480 CCDC61Q9Y6R9 512 aa15.8■□□□□ 0.12
SCAMP2-207ENST00000566480 MYH16Q9H6N6 1097 aa15.8■□□□□ 0.12
SCAMP2-207ENST00000566480 ATP7BP35670 1465 aa15.8■□□□□ 0.12
SCAMP2-207ENST00000566480 ADGRB2O60241 1585 aa15.79■□□□□ 0.12
SCAMP2-207ENST00000566480 MAP2P11137 1827 aaKnown RBP15.79■□□□□ 0.12
SCAMP2-207ENST00000566480 ARHGAP23Q9P227 1491 aa15.79■□□□□ 0.12
SCAMP2-207ENST00000566480 SLIT1O75093 1534 aa15.79■□□□□ 0.12
SCAMP2-207ENST00000566480 PRKAR2BP31323 418 aa15.79■□□□□ 0.12
SCAMP2-207ENST00000566480 EXOSC9Q06265 439 aaKnown RBP15.79■□□□□ 0.12
SCAMP2-207ENST00000566480 PNPLA6Q8IY17 1366 aa15.79■□□□□ 0.12
SCAMP2-207ENST00000566480 CPSF1Q10570 1443 aaKnown RBP15.79■□□□□ 0.12
SCAMP2-207ENST00000566480 ADAMTS13Q76LX8 1427 aa15.79■□□□□ 0.12
SCAMP2-207ENST00000566480 PDE3AQ14432 1141 aa15.78■□□□□ 0.12
SCAMP2-207ENST00000566480 MS4A1P11836 297 aa15.77■□□□□ 0.12
SCAMP2-207ENST00000566480 PHACTR3Q96KR7 559 aa15.77■□□□□ 0.12
SCAMP2-207ENST00000566480 CPS1P31327 1500 aa15.77■□□□□ 0.12
SCAMP2-207ENST00000566480 THUMPD2Q9BTF0 503 aaKnown RBP15.76■□□□□ 0.11
SCAMP2-207ENST00000566480 TAOK2Q9UL54 1235 aa15.76■□□□□ 0.11
SCAMP2-207ENST00000566480 NOP58Q9Y2X3 529 aaKnown RBP15.76■□□□□ 0.11
SCAMP2-207ENST00000566480 LAS1LQ9Y4W2 734 aaKnown RBP15.76■□□□□ 0.11
SCAMP2-207ENST00000566480 EDC4Q6P2E9 1401 aaKnown RBP15.76■□□□□ 0.11
SCAMP2-207ENST00000566480 ZNF335Q9H4Z2 1342 aaPredicted RBP15.76■□□□□ 0.11
SCAMP2-207ENST00000566480 SOX12O15370 315 aa15.76■□□□□ 0.11
SCAMP2-207ENST00000566480 THEMISQ8N1K5 641 aaPredicted RBP15.76■□□□□ 0.11
SCAMP2-207ENST00000566480 COG3Q96JB2 828 aa15.76■□□□□ 0.11
SCAMP2-207ENST00000566480 IPO9Q96P70 1041 aaKnown RBP15.76■□□□□ 0.11
SCAMP2-207ENST00000566480 FAM135BQ49AJ0 1406 aa15.75■□□□□ 0.11
SCAMP2-207ENST00000566480 RSPH6AQ9H0K4 717 aa15.75■□□□□ 0.11
SCAMP2-207ENST00000566480 TECPR2O15040 1411 aa15.75■□□□□ 0.11
SCAMP2-207ENST00000566480 RBM33Q96EV2 1170 aaKnown RBP15.74■□□□□ 0.11
SCAMP2-207ENST00000566480 LRRC7Q96NW7 1537 aa15.74■□□□□ 0.11
SCAMP2-207ENST00000566480 FCHSD2O94868 740 aa15.74■□□□□ 0.11
SCAMP2-207ENST00000566480 EID1Q9Y6B2 187 aa15.74■□□□□ 0.11
SCAMP2-207ENST00000566480 NPHP4O75161 1426 aaPredicted RBP15.74■□□□□ 0.11
SCAMP2-207ENST00000566480 SMC4Q9NTJ3 1288 aa15.73■□□□□ 0.11
SCAMP2-207ENST00000566480 PTPRUQ92729 1446 aa15.73■□□□□ 0.11
SCAMP2-207ENST00000566480 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.73■□□□□ 0.11
SCAMP2-207ENST00000566480 ACEP12821 1306 aa15.72■□□□□ 0.11
SCAMP2-207ENST00000566480 PMFBP1Q8TBY8 1022 aa15.72■□□□□ 0.11
SCAMP2-207ENST00000566480 SSH1Q8WYL5 1049 aa15.72■□□□□ 0.11
SCAMP2-207ENST00000566480 SIRT1Q96EB6 747 aa15.72■□□□□ 0.11
SCAMP2-207ENST00000566480 AMOTL2Q9Y2J4 779 aa15.72■□□□□ 0.11
SCAMP2-207ENST00000566480 PCDHB15Q9Y5E8 787 aa15.72■□□□□ 0.11
SCAMP2-207ENST00000566480 KNDC1Q76NI1 1749 aa15.72■□□□□ 0.11
SCAMP2-207ENST00000566480 PLEKHG1Q9ULL1 1385 aa15.72■□□□□ 0.11
SCAMP2-207ENST00000566480 CDC42BPGQ6DT37 1551 aa15.72■□□□□ 0.11
SCAMP2-207ENST00000566480 IL13P35225 146 aa15.72■□□□□ 0.11
SCAMP2-207ENST00000566480 ANKLE2Q86XL3 938 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms