RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 FAM182BQ5T319 152 aa19.78■□□□□ 0.76
COMMD4-214ENST00000566230 SPATA31A5Q5VU36 1347 aa19.77■□□□□ 0.76
COMMD4-214ENST00000566230 SPATA31A7Q8IWB4 1347 aa19.77■□□□□ 0.76
COMMD4-214ENST00000566230 TULP4Q9NRJ4 1543 aa19.77■□□□□ 0.76
COMMD4-214ENST00000566230 RGPD1P0DJD0 1748 aa19.77■□□□□ 0.76
COMMD4-214ENST00000566230 HRCP23327 699 aa19.77■□□□□ 0.76
COMMD4-214ENST00000566230 THSD7AQ9UPZ6 1657 aa19.76■□□□□ 0.75
COMMD4-214ENST00000566230 WASLO00401 505 aaPredicted RBP19.76■□□□□ 0.75
COMMD4-214ENST00000566230 EN1Q05925 392 aaPredicted RBP19.76■□□□□ 0.75
COMMD4-214ENST00000566230 EIF3AQ14152 1382 aaKnown RBP19.74■□□□□ 0.75
COMMD4-214ENST00000566230 TNS1Q9HBL0 1735 aaKnown RBP19.73■□□□□ 0.75
COMMD4-214ENST00000566230 NGDNQ8NEJ9 315 aaKnown RBP19.73■□□□□ 0.75
COMMD4-214ENST00000566230 KDM2AQ9Y2K7 1162 aa19.73■□□□□ 0.75
COMMD4-214ENST00000566230 RAB3GAP2Q9H2M9 1393 aa19.72■□□□□ 0.75
COMMD4-214ENST00000566230 PAK3O75914 559 aaPredicted RBP19.72■□□□□ 0.75
COMMD4-214ENST00000566230 DCAF11Q8TEB1 546 aa19.71■□□□□ 0.75
COMMD4-214ENST00000566230 PRDM11Q9NQV5 511 aa19.71■□□□□ 0.75
COMMD4-214ENST00000566230 DISP2A7MBM2 1401 aa19.7■□□□□ 0.74
COMMD4-214ENST00000566230 ITSN1Q15811 1721 aa19.69■□□□□ 0.74
COMMD4-214ENST00000566230 ARHGEF28Q8N1W1 1705 aaKnown RBP19.69■□□□□ 0.74
COMMD4-214ENST00000566230 R3HDM1Q15032 1099 aaKnown RBP19.69■□□□□ 0.74
COMMD4-214ENST00000566230 SPATA31A1Q5TZJ5 1347 aa19.69■□□□□ 0.74
COMMD4-214ENST00000566230 NUDT16Q96DE0 195 aaKnown RBP19.68■□□□□ 0.74
COMMD4-214ENST00000566230 PHRF1Q9P1Y6 1649 aaKnown RBP19.68■□□□□ 0.74
COMMD4-214ENST00000566230 KIAA0232Q92628 1395 aa19.68■□□□□ 0.74
COMMD4-214ENST00000566230 ATP7BP35670 1465 aa19.67■□□□□ 0.74
COMMD4-214ENST00000566230 CHRNA2Q15822 529 aa19.67■□□□□ 0.74
COMMD4-214ENST00000566230 EZH2Q15910 746 aaKnown RBP19.67■□□□□ 0.74
COMMD4-214ENST00000566230 CAMKK2Q96RR4 588 aa19.65■□□□□ 0.74
COMMD4-214ENST00000566230 TRIM37O94972 964 aa19.64■□□□□ 0.73
COMMD4-214ENST00000566230 ZC3H6P61129 1189 aaKnown RBP19.64■□□□□ 0.73
COMMD4-214ENST00000566230 NUTM2GQ5VZR2 741 aa19.64■□□□□ 0.73
COMMD4-214ENST00000566230 STAC3Q96MF2 364 aa19.64■□□□□ 0.73
COMMD4-214ENST00000566230 STRN4Q9NRL3 753 aa19.64■□□□□ 0.73
COMMD4-214ENST00000566230 FAM196AQ6ZSG2 479 aa19.63■□□□□ 0.73
COMMD4-214ENST00000566230 CDK19Q9BWU1 502 aa19.62■□□□□ 0.73
COMMD4-214ENST00000566230 TOPAZ1Q8N9V7 1692 aa19.62■□□□□ 0.73
COMMD4-214ENST00000566230 POLR3AO14802 1390 aaPredicted RBP19.6■□□□□ 0.73
COMMD4-214ENST00000566230 ACEP12821 1306 aa19.6■□□□□ 0.73
COMMD4-214ENST00000566230 NBPF8Q3BBV2 869 aa19.6■□□□□ 0.73
COMMD4-214ENST00000566230 CAMTA1Q9Y6Y1 1673 aa19.59■□□□□ 0.73
COMMD4-214ENST00000566230 APBA3O96018 575 aa19.59■□□□□ 0.73
COMMD4-214ENST00000566230 USP35Q9P2H5 1018 aa19.59■□□□□ 0.73
COMMD4-214ENST00000566230 SSH2Q76I76 1423 aa19.59■□□□□ 0.73
COMMD4-214ENST00000566230 BARGINQ6ZT62 677 aa19.58■□□□□ 0.72
COMMD4-214ENST00000566230 RREB1Q92766 1687 aa19.58■□□□□ 0.72
COMMD4-214ENST00000566230 NRKQ7Z2Y5 1582 aa19.57■□□□□ 0.72
COMMD4-214ENST00000566230 LMO7Q8WWI1 1683 aa19.57■□□□□ 0.72
COMMD4-214ENST00000566230 PLEKHG3A1L390 1219 aa19.57■□□□□ 0.72
COMMD4-214ENST00000566230 EVA1CP58658 441 aa19.57■□□□□ 0.72
COMMD4-214ENST00000566230 CCDC61Q9Y6R9 512 aa19.57■□□□□ 0.72
COMMD4-214ENST00000566230 LARP1Q6PKG0 1096 aaKnown RBP19.56■□□□□ 0.72
COMMD4-214ENST00000566230 NUP188Q5SRE5 1749 aa19.56■□□□□ 0.72
COMMD4-214ENST00000566230 PARD3Q8TEW0 1356 aa19.56■□□□□ 0.72
COMMD4-214ENST00000566230 PDE3BQ13370 1112 aa19.55■□□□□ 0.72
COMMD4-214ENST00000566230 USP19O94966 1318 aa19.54■□□□□ 0.72
COMMD4-214ENST00000566230 ABTB2Q8N961 1025 aa19.54■□□□□ 0.72
COMMD4-214ENST00000566230 CPDO75976 1380 aa19.54■□□□□ 0.72
COMMD4-214ENST00000566230 KIAA1210Q9ULL0 1709 aa19.54■□□□□ 0.72
COMMD4-214ENST00000566230 TCP11L2Q8N4U5 519 aa19.53■□□□□ 0.72
COMMD4-214ENST00000566230 NBPF1Q3BBV0 1214 aa19.51■□□□□ 0.71
COMMD4-214ENST00000566230 PARP4Q9UKK3 1724 aaKnown RBP19.5■□□□□ 0.71
COMMD4-214ENST00000566230 GCP02774 474 aa19.49■□□□□ 0.71
COMMD4-214ENST00000566230 NLRP13Q86W25 1043 aa19.48■□□□□ 0.71
COMMD4-214ENST00000566230 THRAP3Q9Y2W1 955 aaKnown RBP19.48■□□□□ 0.71
COMMD4-214ENST00000566230 COL5A2P05997 1499 aaPredicted RBP19.48■□□□□ 0.71
COMMD4-214ENST00000566230 SBF2Q86WG5 1849 aa19.47■□□□□ 0.71
COMMD4-214ENST00000566230 NBPF14Q5TI25 921 aa19.47■□□□□ 0.71
COMMD4-214ENST00000566230 PPIP5K1Q6PFW1 1433 aa19.47■□□□□ 0.71
COMMD4-214ENST00000566230 PEAK1Q9H792 1746 aa19.47■□□□□ 0.71
COMMD4-214ENST00000566230 CABP2Q9NPB3 220 aa19.46■□□□□ 0.71
COMMD4-214ENST00000566230 SRPK2P78362 688 aaKnown RBP19.45■□□□□ 0.7
COMMD4-214ENST00000566230 CRB1P82279 1406 aa19.43■□□□□ 0.7
COMMD4-214ENST00000566230 COL18A1P39060 1754 aa19.42■□□□□ 0.7
COMMD4-214ENST00000566230 CENPJQ9HC77 1338 aaPredicted RBP19.42■□□□□ 0.7
COMMD4-214ENST00000566230 BRD4O60885 1362 aaPredicted RBP19.42■□□□□ 0.7
COMMD4-214ENST00000566230 LRRC37A3O60309 1634 aa19.41■□□□□ 0.7
COMMD4-214ENST00000566230 QRICH2Q9H0J4 1663 aa19.41■□□□□ 0.7
COMMD4-214ENST00000566230 ZBTB7CA1YPR0 619 aa19.41■□□□□ 0.7
COMMD4-214ENST00000566230 SPON1Q9HCB6 807 aa19.41■□□□□ 0.7
COMMD4-214ENST00000566230 RGPD3A6NKT7 1758 aaPredicted RBP19.41■□□□□ 0.7
COMMD4-214ENST00000566230 RGPD4Q7Z3J3 1758 aa19.41■□□□□ 0.7
COMMD4-214ENST00000566230 AATKQ6ZMQ8 1374 aa19.41■□□□□ 0.7
COMMD4-214ENST00000566230 USP6P35125 1406 aa19.41■□□□□ 0.7
COMMD4-214ENST00000566230 SLIT3O75094 1523 aa19.41■□□□□ 0.7
COMMD4-214ENST00000566230 C11orf95C9JLR9 678 aaPredicted RBP19.4■□□□□ 0.7
COMMD4-214ENST00000566230 KCNQ2O43526 872 aa19.4■□□□□ 0.7
COMMD4-214ENST00000566230 NLRP6P59044 892 aa19.4■□□□□ 0.7
COMMD4-214ENST00000566230 PTF1AQ7RTS3 328 aa19.4■□□□□ 0.7
COMMD4-214ENST00000566230 CABP1Q9NZU7 370 aa19.4■□□□□ 0.7
COMMD4-214ENST00000566230 OVOS2A0A0G2JMS6 1433 aa19.4■□□□□ 0.7
COMMD4-214ENST00000566230 OVOS2A0A0J9YW53 1432 aa19.4■□□□□ 0.7
COMMD4-214ENST00000566230 OVOS2Q6IE36 1432 aa19.4■□□□□ 0.7
COMMD4-214ENST00000566230 WNK3Q9BYP7 1800 aa19.39■□□□□ 0.69
COMMD4-214ENST00000566230 PIK3C2AO00443 1686 aa19.38■□□□□ 0.69
COMMD4-214ENST00000566230 PLSCR1O15162 318 aa19.38■□□□□ 0.69
COMMD4-214ENST00000566230 YY1P25490 414 aa19.38■□□□□ 0.69
COMMD4-214ENST00000566230 RGPD5Q99666 1765 aa19.38■□□□□ 0.69
COMMD4-214ENST00000566230 DDB1Q16531 1140 aa19.37■□□□□ 0.69
COMMD4-214ENST00000566230 PPP1R1BQ9UD71 204 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms