RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 SCAPERQ9BY12 1400 aa14.28□□□□□ -0.12
UBFD1-205ENST00000566136 HECW2Q9P2P5 1572 aa14.28□□□□□ -0.12
UBFD1-205ENST00000566136 MFSD10Q14728 455 aa14.27□□□□□ -0.12
UBFD1-205ENST00000566136 ARHGEF40Q8TER5 1519 aa14.27□□□□□ -0.12
UBFD1-205ENST00000566136 RFC5P40937 340 aa14.27□□□□□ -0.13
UBFD1-205ENST00000566136 ADAMTSL3P82987 1691 aa14.27□□□□□ -0.13
UBFD1-205ENST00000566136 EFCAB2Q5VUJ9 269 aa14.26□□□□□ -0.13
UBFD1-205ENST00000566136 CRISPLD2Q9H0B8 497 aa14.26□□□□□ -0.13
UBFD1-205ENST00000566136 YEATS2Q9ULM3 1422 aa14.26□□□□□ -0.13
UBFD1-205ENST00000566136 GRXCR2A6NFK2 248 aa14.26□□□□□ -0.13
UBFD1-205ENST00000566136 PHLDB3Q6NSJ2 640 aa14.26□□□□□ -0.13
UBFD1-205ENST00000566136 EMILIN3Q9NT22 766 aa14.26□□□□□ -0.13
UBFD1-205ENST00000566136 MYO5CQ9NQX4 1742 aa14.26□□□□□ -0.13
UBFD1-205ENST00000566136 PHOX2BQ99453 314 aa14.25□□□□□ -0.13
UBFD1-205ENST00000566136 CCDC18Q5T9S5 1454 aa14.25□□□□□ -0.13
UBFD1-205ENST00000566136 TSNAXIP1Q2TAA8 658 aa14.25□□□□□ -0.13
UBFD1-205ENST00000566136 TMTC2Q8N394 836 aa14.25□□□□□ -0.13
UBFD1-205ENST00000566136 LNPKQ9C0E8 428 aa14.25□□□□□ -0.13
UBFD1-205ENST00000566136 BCORL1Q5H9F3 1711 aa14.24□□□□□ -0.13
UBFD1-205ENST00000566136 LMOD1P29536 600 aaPredicted RBP14.24□□□□□ -0.13
UBFD1-205ENST00000566136 ZMYM4Q5VZL5 1548 aa14.24□□□□□ -0.13
UBFD1-205ENST00000566136 POGZQ7Z3K3 1410 aa14.24□□□□□ -0.13
UBFD1-205ENST00000566136 PTPRMP28827 1452 aa14.24□□□□□ -0.13
UBFD1-205ENST00000566136 ZFYVE16Q7Z3T8 1539 aa14.23□□□□□ -0.13
UBFD1-205ENST00000566136 HSP90AB4PQ58FF6 505 aa14.23□□□□□ -0.13
UBFD1-205ENST00000566136 PTPN23Q9H3S7 1636 aa14.23□□□□□ -0.13
UBFD1-205ENST00000566136 ARHGAP5Q13017 1502 aa14.23□□□□□ -0.13
UBFD1-205ENST00000566136 MADDQ8WXG6 1647 aa14.22□□□□□ -0.13
UBFD1-205ENST00000566136 GNPATO15228 680 aa14.22□□□□□ -0.13
UBFD1-205ENST00000566136 SPTY2D1Q68D10 685 aaPredicted RBP14.22□□□□□ -0.13
UBFD1-205ENST00000566136 LARGE2Q8N3Y3 721 aa14.22□□□□□ -0.13
UBFD1-205ENST00000566136 SIGLEC1Q9BZZ2 1709 aa14.21□□□□□ -0.13
UBFD1-205ENST00000566136 SERPINB4P48594 390 aa14.21□□□□□ -0.13
UBFD1-205ENST00000566136 BEGAINQ9BUH8 593 aa14.21□□□□□ -0.13
UBFD1-205ENST00000566136 PPP1R12CQ9BZL4 782 aa14.21□□□□□ -0.13
UBFD1-205ENST00000566136 GNEQ9Y223 722 aaKnown RBP14.21□□□□□ -0.13
UBFD1-205ENST00000566136 HFM1A2PYH4 1435 aa14.21□□□□□ -0.13
UBFD1-205ENST00000566136 DHX38Q92620 1227 aaKnown RBP14.21□□□□□ -0.13
UBFD1-205ENST00000566136 MAGI2Q86UL8 1455 aa14.21□□□□□ -0.14
UBFD1-205ENST00000566136 MLECQ14165 292 aa14.2□□□□□ -0.14
UBFD1-205ENST00000566136 NLGN1Q8N2Q7 840 aa14.2□□□□□ -0.14
UBFD1-205ENST00000566136 AFAP1Q8N556 730 aa14.2□□□□□ -0.14
UBFD1-205ENST00000566136 CHIC2Q9UKJ5 165 aa14.2□□□□□ -0.14
UBFD1-205ENST00000566136 PALM3A6NDB9 673 aaPredicted RBP14.2□□□□□ -0.14
UBFD1-205ENST00000566136 EFCAB3Q8N7B9 438 aa14.2□□□□□ -0.14
UBFD1-205ENST00000566136 NAIPQ13075 1403 aa14.19□□□□□ -0.14
UBFD1-205ENST00000566136 PIF1Q9H611 641 aa14.19□□□□□ -0.14
UBFD1-205ENST00000566136 RRP7BPQ9NSQ0 103 aa14.19□□□□□ -0.14
UBFD1-205ENST00000566136 IQSEC3Q9UPP2 1182 aaPredicted RBP14.19□□□□□ -0.14
UBFD1-205ENST00000566136 CDC42BPBQ9Y5S2 1711 aa14.18□□□□□ -0.14
UBFD1-205ENST00000566136 MNX1P50219 401 aaPredicted RBP14.18□□□□□ -0.14
UBFD1-205ENST00000566136 MDM2Q00987 491 aaPredicted RBP14.18□□□□□ -0.14
UBFD1-205ENST00000566136 MAFGO15525 162 aa14.17□□□□□ -0.14
UBFD1-205ENST00000566136 MYSM1Q5VVJ2 828 aa14.17□□□□□ -0.14
UBFD1-205ENST00000566136 UCN2Q96RP3 112 aa14.17□□□□□ -0.14
UBFD1-205ENST00000566136 RIMS1Q86UR5 1692 aaKnown RBP14.17□□□□□ -0.14
UBFD1-205ENST00000566136 ANKRD33BA6NCL7 494 aa14.17□□□□□ -0.14
UBFD1-205ENST00000566136 C7P10643 843 aa14.17□□□□□ -0.14
UBFD1-205ENST00000566136 GPATCH11Q8N954 259 aa14.16□□□□□ -0.14
UBFD1-205ENST00000566136 STK32AQ8WU08 396 aa14.16□□□□□ -0.14
UBFD1-205ENST00000566136 PMM1Q92871 262 aa14.16□□□□□ -0.14
UBFD1-205ENST00000566136 SPACA7Q96KW9 195 aa14.16□□□□□ -0.14
UBFD1-205ENST00000566136 ATP10AO60312 1499 aa14.16□□□□□ -0.14
UBFD1-205ENST00000566136 ZNF518AQ6AHZ1 1483 aa14.16□□□□□ -0.14
UBFD1-205ENST00000566136 CAPN15O75808 1086 aa14.16□□□□□ -0.14
UBFD1-205ENST00000566136 NPAS4Q8IUM7 802 aa14.16□□□□□ -0.14
UBFD1-205ENST00000566136 PREX2Q70Z35 1606 aa14.15□□□□□ -0.14
UBFD1-205ENST00000566136 PDE4AP27815 886 aa14.15□□□□□ -0.14
UBFD1-205ENST00000566136 PAX3P23760 479 aa14.15□□□□□ -0.14
UBFD1-205ENST00000566136 ARHGEF12Q9NZN5 1544 aa14.14□□□□□ -0.15
UBFD1-205ENST00000566136 PSME1Q06323 249 aa14.14□□□□□ -0.15
UBFD1-205ENST00000566136 TCOF1Q13428 1488 aaKnown RBP14.14□□□□□ -0.15
UBFD1-205ENST00000566136 C9orf84Q5VXU9 1444 aa14.14□□□□□ -0.15
UBFD1-205ENST00000566136 TRAPPC8Q9Y2L5 1435 aa14.14□□□□□ -0.15
UBFD1-205ENST00000566136 ERCC5P28715 1186 aaPredicted RBP14.14□□□□□ -0.15
UBFD1-205ENST00000566136 KDM5CP41229 1560 aa14.13□□□□□ -0.15
UBFD1-205ENST00000566136 PDE6BP35913 854 aa14.13□□□□□ -0.15
UBFD1-205ENST00000566136 CDC42BPAQ5VT25 1732 aa14.13□□□□□ -0.15
UBFD1-205ENST00000566136 PPFIA4O75335 1185 aa14.13□□□□□ -0.15
UBFD1-205ENST00000566136 ABCC1P33527 1531 aa14.12□□□□□ -0.15
UBFD1-205ENST00000566136 TERF2IPQ9NYB0 399 aa14.12□□□□□ -0.15
UBFD1-205ENST00000566136 TONSLQ96HA7 1378 aa14.12□□□□□ -0.15
UBFD1-205ENST00000566136 FOXD4Q12950 439 aaPredicted RBP14.12□□□□□ -0.15
UBFD1-205ENST00000566136 TFIP11Q9UBB9 837 aaKnown RBP14.12□□□□□ -0.15
UBFD1-205ENST00000566136 OS9Q13438 667 aaPredicted RBP14.11□□□□□ -0.15
UBFD1-205ENST00000566136 AAMPQ13685 434 aa14.11□□□□□ -0.15
UBFD1-205ENST00000566136 CCDC144BQ3MJ40 725 aa14.11□□□□□ -0.15
UBFD1-205ENST00000566136 SLAIN2Q9P270 581 aa14.1□□□□□ -0.15
UBFD1-205ENST00000566136 GPATCH8Q9UKJ3 1502 aaKnown RBP14.1□□□□□ -0.15
UBFD1-205ENST00000566136 SSTR3P32745 418 aaPredicted RBP14.1□□□□□ -0.15
UBFD1-205ENST00000566136 RALBP1Q15311 655 aa14.1□□□□□ -0.15
UBFD1-205ENST00000566136 ILDR1Q86SU0 546 aaPredicted RBP14.1□□□□□ -0.15
UBFD1-205ENST00000566136 DIP2CQ9Y2E4 1556 aa14.1□□□□□ -0.15
UBFD1-205ENST00000566136 FER1L4A9Z1Z3 1794 aa14.09□□□□□ -0.15
UBFD1-205ENST00000566136 PDIA6Q15084 440 aa14.09□□□□□ -0.15
UBFD1-205ENST00000566136 SF3A1Q15459 793 aaKnown RBP14.09□□□□□ -0.15
UBFD1-205ENST00000566136 TRIM52Q96A61 297 aa14.09□□□□□ -0.15
UBFD1-205ENST00000566136 G3BP2Q9UN86 482 aaKnown RBP14.09□□□□□ -0.15
UBFD1-205ENST00000566136 ITSN2Q9NZM3 1697 aa14.09□□□□□ -0.15
UBFD1-205ENST00000566136 PRIM1P49642 420 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms