RNA–Protein interactions for RNA: ENST00000566133.1

FANCA-219, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-219ENST00000566133 PRDM11Q9NQV5 511 aa16.23■□□□□ 0.19
FANCA-219ENST00000566133 ABCA3Q99758 1704 aa16.22■□□□□ 0.19
FANCA-219ENST00000566133 PLEKHG3A1L390 1219 aa16.22■□□□□ 0.19
FANCA-219ENST00000566133 ZC3H6P61129 1189 aaKnown RBP16.22■□□□□ 0.19
FANCA-219ENST00000566133 SRPK2P78362 688 aaKnown RBP16.22■□□□□ 0.19
FANCA-219ENST00000566133 DEFB132Q7Z7B7 95 aa16.22■□□□□ 0.19
FANCA-219ENST00000566133 SIN3AQ96ST3 1273 aa16.22■□□□□ 0.19
FANCA-219ENST00000566133 CHRNA2Q15822 529 aa16.21■□□□□ 0.19
FANCA-219ENST00000566133 ABTB2Q8N961 1025 aa16.21■□□□□ 0.19
FANCA-219ENST00000566133 L3MBTL2Q969R5 705 aa16.21■□□□□ 0.19
FANCA-219ENST00000566133 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.21■□□□□ 0.19
FANCA-219ENST00000566133 NEUROD1Q13562 356 aa16.2■□□□□ 0.18
FANCA-219ENST00000566133 CABP2Q9NPB3 220 aa16.2■□□□□ 0.18
FANCA-219ENST00000566133 BLMP54132 1417 aaPredicted RBP16.19■□□□□ 0.18
FANCA-219ENST00000566133 ARHGEF28Q8N1W1 1705 aaKnown RBP16.19■□□□□ 0.18
FANCA-219ENST00000566133 EVA1CP58658 441 aa16.19■□□□□ 0.18
FANCA-219ENST00000566133 SPATA31A5Q5VU36 1347 aa16.19■□□□□ 0.18
FANCA-219ENST00000566133 SPATA31A7Q8IWB4 1347 aa16.19■□□□□ 0.18
FANCA-219ENST00000566133 CENPJQ9HC77 1338 aaPredicted RBP16.19■□□□□ 0.18
FANCA-219ENST00000566133 STRN4Q9NRL3 753 aa16.18■□□□□ 0.18
FANCA-219ENST00000566133 TRPM3Q9HCF6 1732 aaPredicted RBP16.17■□□□□ 0.18
FANCA-219ENST00000566133 FAM182BQ5T319 152 aa16.17■□□□□ 0.18
FANCA-219ENST00000566133 ATP7BP35670 1465 aa16.16■□□□□ 0.18
FANCA-219ENST00000566133 POLR3AO14802 1390 aaPredicted RBP16.16■□□□□ 0.18
FANCA-219ENST00000566133 KIAA0232Q92628 1395 aa16.16■□□□□ 0.18
FANCA-219ENST00000566133 CABP1Q9NZU7 370 aa16.16■□□□□ 0.18
FANCA-219ENST00000566133 NWD2Q9ULI1 1742 aa16.16■□□□□ 0.18
FANCA-219ENST00000566133 ALS2Q96Q42 1657 aa16.15■□□□□ 0.18
FANCA-219ENST00000566133 NLRP13Q86W25 1043 aa16.15■□□□□ 0.18
FANCA-219ENST00000566133 USP35Q9P2H5 1018 aa16.15■□□□□ 0.18
FANCA-219ENST00000566133 BRWD3Q6RI45 1802 aa16.15■□□□□ 0.18
FANCA-219ENST00000566133 PLCH1Q4KWH8 1693 aa16.14■□□□□ 0.18
FANCA-219ENST00000566133 BAG6P46379 1132 aa16.14■□□□□ 0.17
FANCA-219ENST00000566133 GCP02774 474 aa16.13■□□□□ 0.17
FANCA-219ENST00000566133 ADRA2BP18089 450 aa16.13■□□□□ 0.17
FANCA-219ENST00000566133 CRYBG1Q9Y4K1 1723 aa16.13■□□□□ 0.17
FANCA-219ENST00000566133 SPATA31A1Q5TZJ5 1347 aa16.13■□□□□ 0.17
FANCA-219ENST00000566133 COL14A1Q05707 1796 aaKnown RBP16.12■□□□□ 0.17
FANCA-219ENST00000566133 PPIP5K1Q6PFW1 1433 aa16.11■□□□□ 0.17
FANCA-219ENST00000566133 NLRP6P59044 892 aa16.11■□□□□ 0.17
FANCA-219ENST00000566133 EN1Q05925 392 aaPredicted RBP16.11■□□□□ 0.17
FANCA-219ENST00000566133 KIAA1210Q9ULL0 1709 aa16.11■□□□□ 0.17
FANCA-219ENST00000566133 ZBTB7CA1YPR0 619 aa16.1■□□□□ 0.17
FANCA-219ENST00000566133 LARP1Q6PKG0 1096 aaKnown RBP16.1■□□□□ 0.17
FANCA-219ENST00000566133 EVC2Q86UK5 1308 aa16.1■□□□□ 0.17
FANCA-219ENST00000566133 PDE3BQ13370 1112 aa16.09■□□□□ 0.17
FANCA-219ENST00000566133 FAM196AQ6ZSG2 479 aa16.09■□□□□ 0.17
FANCA-219ENST00000566133 ITSN1Q15811 1721 aa16.08■□□□□ 0.17
FANCA-219ENST00000566133 BARGINQ6ZT62 677 aa16.08■□□□□ 0.16
FANCA-219ENST00000566133 ZNF692Q9BU19 519 aaPredicted RBP16.08■□□□□ 0.16
FANCA-219ENST00000566133 NRAPQ86VF7 1730 aa16.08■□□□□ 0.16
FANCA-219ENST00000566133 TRIM37O94972 964 aa16.07■□□□□ 0.16
FANCA-219ENST00000566133 KCNA4P22459 653 aa16.07■□□□□ 0.16
FANCA-219ENST00000566133 TCP11L2Q8N4U5 519 aa16.07■□□□□ 0.16
FANCA-219ENST00000566133 EP400Q96L91 3159 aa16.06■□□□□ 0.16
FANCA-219ENST00000566133 TOPAZ1Q8N9V7 1692 aa16.06■□□□□ 0.16
FANCA-219ENST00000566133 ROCK2O75116 1388 aaKnown RBP16.06■□□□□ 0.16
FANCA-219ENST00000566133 USP19O94966 1318 aa16.06■□□□□ 0.16
FANCA-219ENST00000566133 PSDA5PKW4 1024 aaPredicted RBP16.06■□□□□ 0.16
FANCA-219ENST00000566133 BRD4O60885 1362 aaPredicted RBP16.05■□□□□ 0.16
FANCA-219ENST00000566133 CPDO75976 1380 aa16.04■□□□□ 0.16
FANCA-219ENST00000566133 EZH2Q15910 746 aaKnown RBP16.04■□□□□ 0.16
FANCA-219ENST00000566133 THRAP3Q9Y2W1 955 aaKnown RBP16.04■□□□□ 0.16
FANCA-219ENST00000566133 SSH2Q76I76 1423 aa16.03■□□□□ 0.16
FANCA-219ENST00000566133 APBA3O96018 575 aa16.03■□□□□ 0.16
FANCA-219ENST00000566133 CAMTA1Q9Y6Y1 1673 aa16.02■□□□□ 0.16
FANCA-219ENST00000566133 USP6P35125 1406 aa16.02■□□□□ 0.15
FANCA-219ENST00000566133 TTC21BQ7Z4L5 1316 aa16.01■□□□□ 0.15
FANCA-219ENST00000566133 CAMKK2Q96RR4 588 aa16.01■□□□□ 0.15
FANCA-219ENST00000566133 CARD11Q9BXL7 1154 aa16.01■□□□□ 0.15
FANCA-219ENST00000566133 PHRF1Q9P1Y6 1649 aaKnown RBP16.01■□□□□ 0.15
FANCA-219ENST00000566133 SOX12O15370 315 aa16■□□□□ 0.15
FANCA-219ENST00000566133 R3HDM1Q15032 1099 aaKnown RBP16■□□□□ 0.15
FANCA-219ENST00000566133 TOM1L2Q6ZVM7 507 aa16■□□□□ 0.15
FANCA-219ENST00000566133 AXIN2Q9Y2T1 843 aa16■□□□□ 0.15
FANCA-219ENST00000566133 QRICH2Q9H0J4 1663 aa15.99■□□□□ 0.15
FANCA-219ENST00000566133 KCNH5Q8NCM2 988 aa15.99■□□□□ 0.15
FANCA-219ENST00000566133 ARHGEF25Q86VW2 580 aa15.98■□□□□ 0.15
FANCA-219ENST00000566133 AATKQ6ZMQ8 1374 aa15.98■□□□□ 0.15
FANCA-219ENST00000566133 TMC1Q8TDI8 760 aa15.97■□□□□ 0.15
FANCA-219ENST00000566133 THSD7AQ9UPZ6 1657 aa15.97■□□□□ 0.15
FANCA-219ENST00000566133 TRPM1Q7Z4N2 1603 aa15.97■□□□□ 0.15
FANCA-219ENST00000566133 TTC21AQ8NDW8 1320 aa15.96■□□□□ 0.15
FANCA-219ENST00000566133 DDB1Q16531 1140 aa15.96■□□□□ 0.15
FANCA-219ENST00000566133 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.96■□□□□ 0.15
FANCA-219ENST00000566133 NRKQ7Z2Y5 1582 aa15.96■□□□□ 0.14
FANCA-219ENST00000566133 C11orf95C9JLR9 678 aaPredicted RBP15.95■□□□□ 0.14
FANCA-219ENST00000566133 CSB-PGBD3P0DP91 1061 aa15.95■□□□□ 0.14
FANCA-219ENST00000566133 KTN1Q86UP2 1357 aaKnown RBP15.95■□□□□ 0.14
FANCA-219ENST00000566133 COL5A2P05997 1499 aaPredicted RBP15.95■□□□□ 0.14
FANCA-219ENST00000566133 CRB1P82279 1406 aa15.94■□□□□ 0.14
FANCA-219ENST00000566133 SLC12A5Q9H2X9 1139 aa15.94■□□□□ 0.14
FANCA-219ENST00000566133 DISP2A7MBM2 1401 aa15.94■□□□□ 0.14
FANCA-219ENST00000566133 TONSLQ96HA7 1378 aa15.93■□□□□ 0.14
FANCA-219ENST00000566133 NBPF14Q5TI25 921 aa15.93■□□□□ 0.14
FANCA-219ENST00000566133 WDR17Q8IZU2 1322 aa15.93■□□□□ 0.14
FANCA-219ENST00000566133 HDGFL2Q7Z4V5 671 aaPredicted RBP15.92■□□□□ 0.14
FANCA-219ENST00000566133 CPSF1Q10570 1443 aaKnown RBP15.92■□□□□ 0.14
FANCA-219ENST00000566133 SRCAPQ6ZRS2 3230 aa15.92■□□□□ 0.14
FANCA-219ENST00000566133 LMO7Q8WWI1 1683 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms