RNA–Protein interactions for RNA: ENST00000566074.5

HACD3-207, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 5 BASIC

Gene HACD3, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-207ENST00000566074 PHF8Q9UPP1 1060 aa17.72■□□□□ 0.43
HACD3-207ENST00000566074 NRKQ7Z2Y5 1582 aa17.71■□□□□ 0.43
HACD3-207ENST00000566074 MSH6P52701 1360 aa17.71■□□□□ 0.43
HACD3-207ENST00000566074 SSH2Q76I76 1423 aa17.71■□□□□ 0.43
HACD3-207ENST00000566074 CADPS2Q86UW7 1296 aa17.71■□□□□ 0.42
HACD3-207ENST00000566074 PMFBP1Q8TBY8 1022 aa17.71■□□□□ 0.42
HACD3-207ENST00000566074 TTC21BQ7Z4L5 1316 aa17.7■□□□□ 0.42
HACD3-207ENST00000566074 COG3Q96JB2 828 aa17.7■□□□□ 0.42
HACD3-207ENST00000566074 CFAP53Q96M91 514 aa17.7■□□□□ 0.42
HACD3-207ENST00000566074 RGPD8O14715 1765 aaPredicted RBP17.69■□□□□ 0.42
HACD3-207ENST00000566074 ESCO1Q5FWF5 840 aa17.68■□□□□ 0.42
HACD3-207ENST00000566074 LRRC7Q96NW7 1537 aa17.68■□□□□ 0.42
HACD3-207ENST00000566074 TNNT2P45379 298 aaPredicted RBP17.67■□□□□ 0.42
HACD3-207ENST00000566074 HNRNPUQ00839 825 aaKnown RBP eCLIP17.67■□□□□ 0.42
HACD3-207ENST00000566074 WDR43Q15061 677 aaKnown RBP eCLIP17.67■□□□□ 0.42
HACD3-207ENST00000566074 ZNF335Q9H4Z2 1342 aaPredicted RBP17.67■□□□□ 0.42
HACD3-207ENST00000566074 NME9Q86XW9 330 aa17.67■□□□□ 0.42
HACD3-207ENST00000566074 C1orf167Q5SNV9 1468 aa17.66■□□□□ 0.42
HACD3-207ENST00000566074 AATKQ6ZMQ8 1374 aa17.66■□□□□ 0.42
HACD3-207ENST00000566074 MTHFSP49914 203 aa17.66■□□□□ 0.42
HACD3-207ENST00000566074 KIF1AQ12756 1690 aa17.65■□□□□ 0.42
HACD3-207ENST00000566074 MST1RQ04912 1400 aa17.65■□□□□ 0.42
HACD3-207ENST00000566074 USP31Q70CQ4 1352 aa17.64■□□□□ 0.41
HACD3-207ENST00000566074 OVOS2A0A0J9YW53 1432 aa17.63■□□□□ 0.41
HACD3-207ENST00000566074 OVOS2Q6IE36 1432 aa17.63■□□□□ 0.41
HACD3-207ENST00000566074 PSME1Q06323 249 aa17.63■□□□□ 0.41
HACD3-207ENST00000566074 ORAI2Q96SN7 254 aa17.61■□□□□ 0.41
HACD3-207ENST00000566074 ZBED9Q6R2W3 1325 aa17.61■□□□□ 0.41
HACD3-207ENST00000566074 SMG6Q86US8 1419 aaKnown RBP17.61■□□□□ 0.41
HACD3-207ENST00000566074 BLMP54132 1417 aaPredicted RBP17.6■□□□□ 0.41
HACD3-207ENST00000566074 PNPLA6Q8IY17 1366 aa17.6■□□□□ 0.41
HACD3-207ENST00000566074 ADAMTS8Q9UP79 889 aa17.59■□□□□ 0.41
HACD3-207ENST00000566074 NUDCQ9Y266 331 aa17.59■□□□□ 0.41
HACD3-207ENST00000566074 XIRP1Q702N8 1843 aaKnown RBP17.59■□□□□ 0.41
HACD3-207ENST00000566074 ABTB2Q8N961 1025 aa17.58■□□□□ 0.41
HACD3-207ENST00000566074 POLKQ9UBT6 870 aa17.58■□□□□ 0.41
HACD3-207ENST00000566074 FOXO3O43524 673 aa17.58■□□□□ 0.4
HACD3-207ENST00000566074 PAK3O75914 559 aaPredicted RBP17.58■□□□□ 0.4
HACD3-207ENST00000566074 ZRANB1Q9UGI0 708 aa17.58■□□□□ 0.4
HACD3-207ENST00000566074 USP54Q70EL1 1684 aa17.57■□□□□ 0.4
HACD3-207ENST00000566074 NLRP6P59044 892 aa17.57■□□□□ 0.4
HACD3-207ENST00000566074 CDK12Q9NYV4 1490 aaPredicted RBP17.57■□□□□ 0.4
HACD3-207ENST00000566074 PIK3C2AO00443 1686 aa17.57■□□□□ 0.4
HACD3-207ENST00000566074 NPHP3Q7Z494 1330 aa17.56■□□□□ 0.4
HACD3-207ENST00000566074 COL3A1P02461 1466 aaPredicted RBP17.55■□□□□ 0.4
HACD3-207ENST00000566074 DIAPH1O60610 1272 aaKnown RBP17.55■□□□□ 0.4
HACD3-207ENST00000566074 KIF24Q5T7B8 1368 aa17.54■□□□□ 0.4
HACD3-207ENST00000566074 KRT28Q7Z3Y7 464 aa17.54■□□□□ 0.4
HACD3-207ENST00000566074 NGEFQ8N5V2 710 aa17.54■□□□□ 0.4
HACD3-207ENST00000566074 SLAIN2Q9P270 581 aa17.54■□□□□ 0.4
HACD3-207ENST00000566074 SHPRHQ149N8 1683 aa17.53■□□□□ 0.4
HACD3-207ENST00000566074 PPM1GO15355 546 aaPredicted RBP17.52■□□□□ 0.4
HACD3-207ENST00000566074 PIAS4Q8N2W9 510 aaPredicted RBP17.52■□□□□ 0.4
HACD3-207ENST00000566074 KCNH5Q8NCM2 988 aa17.52■□□□□ 0.4
HACD3-207ENST00000566074 PNNQ9H307 717 aaKnown RBP17.52■□□□□ 0.4
HACD3-207ENST00000566074 SBNO1A3KN83 1393 aa17.52■□□□□ 0.4
HACD3-207ENST00000566074 EMILIN1Q9Y6C2 1016 aa17.52■□□□□ 0.39
HACD3-207ENST00000566074 MAP2P11137 1827 aaKnown RBP17.51■□□□□ 0.39
HACD3-207ENST00000566074 U2AF1L5P0DN76 240 aaPredicted RBP17.5■□□□□ 0.39
HACD3-207ENST00000566074 U2AF1Q01081 240 aaKnown RBP eCLIP17.5■□□□□ 0.39
HACD3-207ENST00000566074 RRS1Q15050 365 aaKnown RBP17.5■□□□□ 0.39
HACD3-207ENST00000566074 LTBP4Q8N2S1 1624 aa17.5■□□□□ 0.39
HACD3-207ENST00000566074 BRINP3Q76B58 766 aa17.49■□□□□ 0.39
HACD3-207ENST00000566074 TRPM3Q9HCF6 1732 aaPredicted RBP17.49■□□□□ 0.39
HACD3-207ENST00000566074 FBLN1P23142 703 aa17.48■□□□□ 0.39
HACD3-207ENST00000566074 FLT4P35916 1363 aa17.48■□□□□ 0.39
HACD3-207ENST00000566074 PDE3BQ13370 1112 aa17.48■□□□□ 0.39
HACD3-207ENST00000566074 RUNDC1Q96C34 613 aa17.48■□□□□ 0.39
HACD3-207ENST00000566074 U2SURPO15042 1029 aaKnown RBP17.47■□□□□ 0.39
HACD3-207ENST00000566074 NCBP3Q53F19 620 aaKnown RBP17.47■□□□□ 0.39
HACD3-207ENST00000566074 MAP3K19Q56UN5 1328 aa17.47■□□□□ 0.39
HACD3-207ENST00000566074 MARF1Q9Y4F3 1742 aaKnown RBP17.46■□□□□ 0.39
HACD3-207ENST00000566074 PXDNQ92626 1479 aa17.46■□□□□ 0.39
HACD3-207ENST00000566074 RTL1A6NKG5 1358 aa17.46■□□□□ 0.39
HACD3-207ENST00000566074 XPCQ01831 940 aaPredicted RBP17.46■□□□□ 0.39
HACD3-207ENST00000566074 ARHGEF10O15013 1369 aa17.46■□□□□ 0.38
HACD3-207ENST00000566074 USP19O94966 1318 aa17.45■□□□□ 0.38
HACD3-207ENST00000566074 FCHSD2O94868 740 aa17.45■□□□□ 0.38
HACD3-207ENST00000566074 IL13P35225 146 aa17.45■□□□□ 0.38
HACD3-207ENST00000566074 NUTM2GQ5VZR2 741 aa17.45■□□□□ 0.38
HACD3-207ENST00000566074 SLIT3O75094 1523 aa17.45■□□□□ 0.38
HACD3-207ENST00000566074 TNS3Q68CZ2 1445 aa17.45■□□□□ 0.38
HACD3-207ENST00000566074 SOX12O15370 315 aa17.45■□□□□ 0.38
HACD3-207ENST00000566074 AMPHP49418 695 aa17.45■□□□□ 0.38
HACD3-207ENST00000566074 ALS2Q96Q42 1657 aa17.44■□□□□ 0.38
HACD3-207ENST00000566074 LMOD2Q6P5Q4 547 aa17.44■□□□□ 0.38
HACD3-207ENST00000566074 CCDC146Q8IYE0 955 aa17.44■□□□□ 0.38
HACD3-207ENST00000566074 SOS2Q07890 1332 aaPredicted RBP17.43■□□□□ 0.38
HACD3-207ENST00000566074 NEFMP07197 916 aa17.43■□□□□ 0.38
HACD3-207ENST00000566074 SPATA31A3Q5VYP0 1347 aa17.43■□□□□ 0.38
HACD3-207ENST00000566074 NFAT5O94916 1531 aa17.42■□□□□ 0.38
HACD3-207ENST00000566074 APAF1O14727 1248 aa17.42■□□□□ 0.38
HACD3-207ENST00000566074 GCP02774 474 aa17.42■□□□□ 0.38
HACD3-207ENST00000566074 MAPK8IP3Q9UPT6 1336 aa17.42■□□□□ 0.38
HACD3-207ENST00000566074 EIF4A2Q14240 407 aaKnown RBP17.41■□□□□ 0.38
HACD3-207ENST00000566074 HSP90AB2PQ58FF8 381 aa17.41■□□□□ 0.38
HACD3-207ENST00000566074 PEAK1Q9H792 1746 aa17.41■□□□□ 0.38
HACD3-207ENST00000566074 PHRF1Q9P1Y6 1649 aaKnown RBP17.4■□□□□ 0.38
HACD3-207ENST00000566074 IQSEC2Q5JU85 1478 aa17.4■□□□□ 0.38
HACD3-207ENST00000566074 HOXC9P31274 260 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms