RNA–Protein interactions for RNA: ENST00000565602.5

EDC3-208, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-208ENST00000565602 EDC4Q6P2E9 1401 aaKnown RBP24.99■■□□□ 1.59
EDC3-208ENST00000565602 NGDNQ8NEJ9 315 aaKnown RBP24.98■■□□□ 1.59
EDC3-208ENST00000565602 ZNF692Q9BU19 519 aaPredicted RBP24.98■■□□□ 1.59
EDC3-208ENST00000565602 ROBO1Q9Y6N7 1651 aa24.98■■□□□ 1.59
EDC3-208ENST00000565602 BRINP3Q76B58 766 aa24.98■■□□□ 1.59
EDC3-208ENST00000565602 NHSL1Q5SYE7 1610 aa24.97■■□□□ 1.59
EDC3-208ENST00000565602 AMER1Q5JTC6 1135 aaPredicted RBP24.97■■□□□ 1.59
EDC3-208ENST00000565602 CERKQ8TCT0 537 aa24.97■■□□□ 1.59
EDC3-208ENST00000565602 ANKRD26Q9UPS8 1709 aa24.97■■□□□ 1.59
EDC3-208ENST00000565602 KNSTRNQ9Y448 316 aa24.96■■□□□ 1.59
EDC3-208ENST00000565602 PIK3C2AO00443 1686 aa24.94■■□□□ 1.58
EDC3-208ENST00000565602 NPC1L1Q9UHC9 1359 aa24.94■■□□□ 1.58
EDC3-208ENST00000565602 FOXO3O43524 673 aa24.94■■□□□ 1.58
EDC3-208ENST00000565602 PXDNQ92626 1479 aa24.92■■□□□ 1.58
EDC3-208ENST00000565602 MARF1Q9Y4F3 1742 aaKnown RBP24.92■■□□□ 1.58
EDC3-208ENST00000565602 TTC21BQ7Z4L5 1316 aa24.91■■□□□ 1.58
EDC3-208ENST00000565602 DDX17Q92841 729 aaKnown RBP24.91■■□□□ 1.58
EDC3-208ENST00000565602 CGNL1Q0VF96 1302 aa24.9■■□□□ 1.58
EDC3-208ENST00000565602 NLRP13Q86W25 1043 aa24.9■■□□□ 1.58
EDC3-208ENST00000565602 USP54Q70EL1 1684 aa24.9■■□□□ 1.58
EDC3-208ENST00000565602 ALS2Q96Q42 1657 aa24.9■■□□□ 1.58
EDC3-208ENST00000565602 CC2D1BQ5T0F9 858 aaKnown RBP24.89■■□□□ 1.58
EDC3-208ENST00000565602 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.89■■□□□ 1.57
EDC3-208ENST00000565602 FYB1O15117 783 aa24.88■■□□□ 1.57
EDC3-208ENST00000565602 PSME1Q06323 249 aa24.88■■□□□ 1.57
EDC3-208ENST00000565602 XPCQ01831 940 aaPredicted RBP24.87■■□□□ 1.57
EDC3-208ENST00000565602 AHDC1Q5TGY3 1603 aaPredicted RBP24.87■■□□□ 1.57
EDC3-208ENST00000565602 NPHP3Q7Z494 1330 aa24.87■■□□□ 1.57
EDC3-208ENST00000565602 NSD2O96028 1365 aa24.87■■□□□ 1.57
EDC3-208ENST00000565602 TOM1O60784 492 aa24.87■■□□□ 1.57
EDC3-208ENST00000565602 PNISRQ8TF01 805 aaKnown RBP24.87■■□□□ 1.57
EDC3-208ENST00000565602 NME9Q86XW9 330 aa24.86■■□□□ 1.57
EDC3-208ENST00000565602 TTC21AQ8NDW8 1320 aa24.86■■□□□ 1.57
EDC3-208ENST00000565602 KRT28Q7Z3Y7 464 aa24.85■■□□□ 1.57
EDC3-208ENST00000565602 ZBED9Q6R2W3 1325 aa24.85■■□□□ 1.57
EDC3-208ENST00000565602 UBAP1LF5GYI3 381 aa24.85■■□□□ 1.57
EDC3-208ENST00000565602 GGNBP2Q9H3C7 697 aa24.83■■□□□ 1.57
EDC3-208ENST00000565602 ZRANB1Q9UGI0 708 aa24.83■■□□□ 1.57
EDC3-208ENST00000565602 OVOS2A0A0J9YW53 1432 aa24.83■■□□□ 1.57
EDC3-208ENST00000565602 OVOS2Q6IE36 1432 aa24.83■■□□□ 1.57
EDC3-208ENST00000565602 SOS2Q07890 1332 aaPredicted RBP24.83■■□□□ 1.56
EDC3-208ENST00000565602 SBNO1A3KN83 1393 aa24.82■■□□□ 1.56
EDC3-208ENST00000565602 USP31Q70CQ4 1352 aa24.81■■□□□ 1.56
EDC3-208ENST00000565602 PHLPP1O60346 1717 aa24.8■■□□□ 1.56
EDC3-208ENST00000565602 PAK3O75914 559 aaPredicted RBP24.79■■□□□ 1.56
EDC3-208ENST00000565602 CRYBG1Q9Y4K1 1723 aa24.79■■□□□ 1.56
EDC3-208ENST00000565602 TNS3Q68CZ2 1445 aa24.79■■□□□ 1.56
EDC3-208ENST00000565602 PIP4K2BP78356 416 aa24.79■■□□□ 1.56
EDC3-208ENST00000565602 COL16A1Q07092 1604 aaPredicted RBP24.78■■□□□ 1.56
EDC3-208ENST00000565602 SPATA31A3Q5VYP0 1347 aa24.76■■□□□ 1.55
EDC3-208ENST00000565602 ABTB2Q8N961 1025 aa24.76■■□□□ 1.55
EDC3-208ENST00000565602 MAP2P11137 1827 aaKnown RBP24.75■■□□□ 1.55
EDC3-208ENST00000565602 MORC1Q86VD1 984 aa24.75■■□□□ 1.55
EDC3-208ENST00000565602 MED1Q15648 1581 aaPredicted RBP24.74■■□□□ 1.55
EDC3-208ENST00000565602 NUTM2GQ5VZR2 741 aa24.73■■□□□ 1.55
EDC3-208ENST00000565602 COG3Q96JB2 828 aa24.73■■□□□ 1.55
EDC3-208ENST00000565602 PHRF1Q9P1Y6 1649 aaKnown RBP24.73■■□□□ 1.55
EDC3-208ENST00000565602 SLIT3O75094 1523 aa24.73■■□□□ 1.55
EDC3-208ENST00000565602 PPP2R1AP30153 589 aa24.72■■□□□ 1.55
EDC3-208ENST00000565602 INSRP06213 1382 aa24.72■■□□□ 1.55
EDC3-208ENST00000565602 ABCA3Q99758 1704 aa24.72■■□□□ 1.55
EDC3-208ENST00000565602 NLRP6P59044 892 aa24.72■■□□□ 1.55
EDC3-208ENST00000565602 NFAT5O94916 1531 aa24.7■■□□□ 1.54
EDC3-208ENST00000565602 ARHGEF10O15013 1369 aa24.69■■□□□ 1.54
EDC3-208ENST00000565602 TNNT2P45379 298 aaPredicted RBP24.69■■□□□ 1.54
EDC3-208ENST00000565602 USP19O94966 1318 aa24.69■■□□□ 1.54
EDC3-208ENST00000565602 COL22A1Q8NFW1 1626 aaPredicted RBP24.68■■□□□ 1.54
EDC3-208ENST00000565602 BLMP54132 1417 aaPredicted RBP24.68■■□□□ 1.54
EDC3-208ENST00000565602 FBLN1P23142 703 aa24.68■■□□□ 1.54
EDC3-208ENST00000565602 LMOD2Q6P5Q4 547 aa24.68■■□□□ 1.54
EDC3-208ENST00000565602 SUPT16HQ9Y5B9 1047 aaKnown RBP24.67■■□□□ 1.54
EDC3-208ENST00000565602 AATKQ6ZMQ8 1374 aa24.67■■□□□ 1.54
EDC3-208ENST00000565602 LTN1O94822 1766 aa24.67■■□□□ 1.54
EDC3-208ENST00000565602 PEAK1Q9H792 1746 aa24.65■■□□□ 1.54
EDC3-208ENST00000565602 SMG6Q86US8 1419 aaKnown RBP24.64■■□□□ 1.54
EDC3-208ENST00000565602 LRRC59Q96AG4 307 aaKnown RBP24.64■■□□□ 1.53
EDC3-208ENST00000565602 NEFLP07196 543 aa24.62■■□□□ 1.53
EDC3-208ENST00000565602 SHPRHQ149N8 1683 aa24.62■■□□□ 1.53
EDC3-208ENST00000565602 PNPLA6Q8IY17 1366 aa24.62■■□□□ 1.53
EDC3-208ENST00000565602 POLKQ9UBT6 870 aa24.61■■□□□ 1.53
EDC3-208ENST00000565602 SOX12O15370 315 aa24.6■■□□□ 1.53
EDC3-208ENST00000565602 CABLES1Q8TDN4 633 aa24.6■■□□□ 1.53
EDC3-208ENST00000565602 GCP02774 474 aa24.59■■□□□ 1.53
EDC3-208ENST00000565602 MTHFSP49914 203 aa24.59■■□□□ 1.53
EDC3-208ENST00000565602 RRS1Q15050 365 aaKnown RBP24.59■■□□□ 1.53
EDC3-208ENST00000565602 PLEKHG5O94827 1062 aa24.58■■□□□ 1.53
EDC3-208ENST00000565602 EMILIN1Q9Y6C2 1016 aa24.58■■□□□ 1.53
EDC3-208ENST00000565602 KCNH5Q8NCM2 988 aa24.58■■□□□ 1.52
EDC3-208ENST00000565602 COL3A1P02461 1466 aaPredicted RBP24.57■■□□□ 1.52
EDC3-208ENST00000565602 CDK12Q9NYV4 1490 aaPredicted RBP24.56■■□□□ 1.52
EDC3-208ENST00000565602 MAP3K19Q56UN5 1328 aa24.56■■□□□ 1.52
EDC3-208ENST00000565602 FKBP8Q14318 412 aa24.56■■□□□ 1.52
EDC3-208ENST00000565602 COL18A1P39060 1754 aa24.55■■□□□ 1.52
EDC3-208ENST00000565602 WDR43Q15061 677 aaKnown RBP eCLIP24.55■■□□□ 1.52
EDC3-208ENST00000565602 HSPA1LP34931 641 aa24.54■■□□□ 1.52
EDC3-208ENST00000565602 RGPD5Q99666 1765 aa24.53■■□□□ 1.52
EDC3-208ENST00000565602 NUDCQ9Y266 331 aa24.53■■□□□ 1.52
EDC3-208ENST00000565602 ARHGEF25Q86VW2 580 aa24.52■■□□□ 1.52
EDC3-208ENST00000565602 SENP3-EIF4A1A0A087X0R7 540 aa24.51■■□□□ 1.51
EDC3-208ENST00000565602 CPDO75976 1380 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms