RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 CRYBG1Q9Y4K1 1723 aa17.46■□□□□ 0.39
SPG7-211ENST00000565370 FNBP4Q8N3X1 1017 aaPredicted RBP17.45■□□□□ 0.38
SPG7-211ENST00000565370 PHRF1Q9P1Y6 1649 aaKnown RBP17.45■□□□□ 0.38
SPG7-211ENST00000565370 RBM6P78332 1123 aaKnown RBP17.44■□□□□ 0.38
SPG7-211ENST00000565370 QTRT2Q9H974 415 aaKnown RBP17.44■□□□□ 0.38
SPG7-211ENST00000565370 CABP2Q9NPB3 220 aa17.44■□□□□ 0.38
SPG7-211ENST00000565370 ATRNO75882 1429 aa17.44■□□□□ 0.38
SPG7-211ENST00000565370 ACEP12821 1306 aa17.44■□□□□ 0.38
SPG7-211ENST00000565370 BRD4O60885 1362 aaPredicted RBP17.43■□□□□ 0.38
SPG7-211ENST00000565370 ATAD2Q6PL18 1390 aa17.43■□□□□ 0.38
SPG7-211ENST00000565370 SLIT2O94813 1529 aa17.43■□□□□ 0.38
SPG7-211ENST00000565370 PLEKHG3A1L390 1219 aa17.43■□□□□ 0.38
SPG7-211ENST00000565370 PLEKHG5O94827 1062 aa17.43■□□□□ 0.38
SPG7-211ENST00000565370 RGS12O14924 1447 aa17.43■□□□□ 0.38
SPG7-211ENST00000565370 COL14A1Q05707 1796 aaKnown RBP17.43■□□□□ 0.38
SPG7-211ENST00000565370 CABLES1Q8TDN4 633 aa17.42■□□□□ 0.38
SPG7-211ENST00000565370 BCL9LQ86UU0 1499 aa17.42■□□□□ 0.38
SPG7-211ENST00000565370 USP6P35125 1406 aa17.39■□□□□ 0.38
SPG7-211ENST00000565370 NRKQ7Z2Y5 1582 aa17.39■□□□□ 0.37
SPG7-211ENST00000565370 AKAP12Q02952 1782 aa17.38■□□□□ 0.37
SPG7-211ENST00000565370 UNC5CLQ8IV45 518 aa17.38■□□□□ 0.37
SPG7-211ENST00000565370 TIMELESSQ9UNS1 1208 aa17.38■□□□□ 0.37
SPG7-211ENST00000565370 NRAPQ86VF7 1730 aa17.38■□□□□ 0.37
SPG7-211ENST00000565370 CABP1Q9NZU7 370 aa17.36■□□□□ 0.37
SPG7-211ENST00000565370 ABTB2Q8N961 1025 aa17.35■□□□□ 0.37
SPG7-211ENST00000565370 GLI3P10071 1580 aa17.35■□□□□ 0.37
SPG7-211ENST00000565370 MON2Q7Z3U7 1717 aa17.35■□□□□ 0.37
SPG7-211ENST00000565370 SLC24A1O60721 1099 aa17.34■□□□□ 0.37
SPG7-211ENST00000565370 CCER1Q8TC90 406 aaPredicted RBP17.34■□□□□ 0.37
SPG7-211ENST00000565370 GJD4Q96KN9 370 aaPredicted RBP17.34■□□□□ 0.37
SPG7-211ENST00000565370 PRDM11Q9NQV5 511 aa17.34■□□□□ 0.37
SPG7-211ENST00000565370 PIK3C2AO00443 1686 aa17.33■□□□□ 0.37
SPG7-211ENST00000565370 USP47Q96K76 1375 aa17.33■□□□□ 0.36
SPG7-211ENST00000565370 USP19O94966 1318 aa17.33■□□□□ 0.36
SPG7-211ENST00000565370 CCDC9Q9Y3X0 531 aaKnown RBP17.33■□□□□ 0.36
SPG7-211ENST00000565370 KIAA0232Q92628 1395 aa17.32■□□□□ 0.36
SPG7-211ENST00000565370 NLRP13Q86W25 1043 aa17.32■□□□□ 0.36
SPG7-211ENST00000565370 VPS72Q15906 364 aa17.31■□□□□ 0.36
SPG7-211ENST00000565370 NUTM2GQ5VZR2 741 aa17.31■□□□□ 0.36
SPG7-211ENST00000565370 ZNF692Q9BU19 519 aaPredicted RBP17.31■□□□□ 0.36
SPG7-211ENST00000565370 SLIT3O75094 1523 aa17.31■□□□□ 0.36
SPG7-211ENST00000565370 SRCAPQ6ZRS2 3230 aa17.3■□□□□ 0.36
SPG7-211ENST00000565370 KTN1Q86UP2 1357 aaKnown RBP17.3■□□□□ 0.36
SPG7-211ENST00000565370 NINLQ9Y2I6 1382 aa17.3■□□□□ 0.36
SPG7-211ENST00000565370 FAM83GA6ND36 823 aa17.3■□□□□ 0.36
SPG7-211ENST00000565370 BTG4Q9NY30 223 aa17.3■□□□□ 0.36
SPG7-211ENST00000565370 CPSF1Q10570 1443 aaKnown RBP17.3■□□□□ 0.36
SPG7-211ENST00000565370 SSH2Q76I76 1423 aa17.3■□□□□ 0.36
SPG7-211ENST00000565370 TTC21AQ8NDW8 1320 aa17.29■□□□□ 0.36
SPG7-211ENST00000565370 CPDO75976 1380 aa17.28■□□□□ 0.36
SPG7-211ENST00000565370 ST20-MTHFSA0A0A6YYL1 179 aa17.28■□□□□ 0.36
SPG7-211ENST00000565370 PUS7Q96PZ0 661 aaKnown RBP17.28■□□□□ 0.36
SPG7-211ENST00000565370 LMO7Q8WWI1 1683 aa17.27■□□□□ 0.36
SPG7-211ENST00000565370 NLRP6P59044 892 aa17.27■□□□□ 0.36
SPG7-211ENST00000565370 HDGFL2Q7Z4V5 671 aaPredicted RBP17.27■□□□□ 0.36
SPG7-211ENST00000565370 TMC1Q8TDI8 760 aa17.27■□□□□ 0.36
SPG7-211ENST00000565370 ZC3H6P61129 1189 aaKnown RBP17.26■□□□□ 0.35
SPG7-211ENST00000565370 USP54Q70EL1 1684 aa17.26■□□□□ 0.35
SPG7-211ENST00000565370 TTC21BQ7Z4L5 1316 aa17.25■□□□□ 0.35
SPG7-211ENST00000565370 EDC4Q6P2E9 1401 aaKnown RBP17.25■□□□□ 0.35
SPG7-211ENST00000565370 A0A0G2JS52 829 aa17.25■□□□□ 0.35
SPG7-211ENST00000565370 TMF1P82094 1093 aa17.25■□□□□ 0.35
SPG7-211ENST00000565370 MYT1Q01538 1121 aa17.25■□□□□ 0.35
SPG7-211ENST00000565370 TESK2Q96S53 571 aa17.25■□□□□ 0.35
SPG7-211ENST00000565370 TERF2IPQ9NYB0 399 aa17.25■□□□□ 0.35
SPG7-211ENST00000565370 GCP02774 474 aa17.24■□□□□ 0.35
SPG7-211ENST00000565370 CHRNA2Q15822 529 aa17.24■□□□□ 0.35
SPG7-211ENST00000565370 CD163L1Q9NR16 1453 aa17.24■□□□□ 0.35
SPG7-211ENST00000565370 A0A1W2PP64 1363 aa17.23■□□□□ 0.35
SPG7-211ENST00000565370 BRWD3Q6RI45 1802 aa17.23■□□□□ 0.35
SPG7-211ENST00000565370 CDCA8Q53HL2 280 aa17.22■□□□□ 0.35
SPG7-211ENST00000565370 KCNH5Q8NCM2 988 aa17.22■□□□□ 0.35
SPG7-211ENST00000565370 STRN4Q9NRL3 753 aa17.22■□□□□ 0.35
SPG7-211ENST00000565370 ZRANB1Q9UGI0 708 aa17.22■□□□□ 0.35
SPG7-211ENST00000565370 SPATA31A5Q5VU36 1347 aa17.21■□□□□ 0.35
SPG7-211ENST00000565370 SPATA31A7Q8IWB4 1347 aa17.21■□□□□ 0.35
SPG7-211ENST00000565370 ABCC6O95255 1503 aa17.21■□□□□ 0.35
SPG7-211ENST00000565370 THSD7AQ9UPZ6 1657 aa17.21■□□□□ 0.35
SPG7-211ENST00000565370 CAMTA1Q9Y6Y1 1673 aa17.2■□□□□ 0.34
SPG7-211ENST00000565370 COL5A2P05997 1499 aaPredicted RBP17.2■□□□□ 0.34
SPG7-211ENST00000565370 ZBTB7CA1YPR0 619 aa17.2■□□□□ 0.34
SPG7-211ENST00000565370 SEPT12Q8IYM1 358 aa17.2■□□□□ 0.34
SPG7-211ENST00000565370 EVA1CP58658 441 aa17.19■□□□□ 0.34
SPG7-211ENST00000565370 FAM98CQ17RN3 349 aaKnown RBP17.19■□□□□ 0.34
SPG7-211ENST00000565370 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.19■□□□□ 0.34
SPG7-211ENST00000565370 NFAT5O94916 1531 aa17.19■□□□□ 0.34
SPG7-211ENST00000565370 AATKQ6ZMQ8 1374 aa17.18■□□□□ 0.34
SPG7-211ENST00000565370 USP31Q70CQ4 1352 aa17.18■□□□□ 0.34
SPG7-211ENST00000565370 ANKRD36BQ8N2N9 1353 aa17.18■□□□□ 0.34
SPG7-211ENST00000565370 SLC12A5Q9H2X9 1139 aa17.18■□□□□ 0.34
SPG7-211ENST00000565370 EP400Q96L91 3159 aa17.18■□□□□ 0.34
SPG7-211ENST00000565370 ONECUT3O60422 494 aaPredicted RBP17.17■□□□□ 0.34
SPG7-211ENST00000565370 SPATA31A1Q5TZJ5 1347 aa17.17■□□□□ 0.34
SPG7-211ENST00000565370 KRT27Q7Z3Y8 459 aa17.16■□□□□ 0.34
SPG7-211ENST00000565370 MYOM1P52179 1685 aa17.16■□□□□ 0.34
SPG7-211ENST00000565370 OVOS2A0A0J9YW53 1432 aa17.15■□□□□ 0.34
SPG7-211ENST00000565370 CRB1P82279 1406 aa17.15■□□□□ 0.34
SPG7-211ENST00000565370 OVOS2Q6IE36 1432 aa17.15■□□□□ 0.34
SPG7-211ENST00000565370 SOX12O15370 315 aa17.15■□□□□ 0.34
SPG7-211ENST00000565370 LTN1O94822 1766 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms