RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 ACEP12821 1306 aa33.38■■■□□ 2.93
LINC01003-201ENST00000564834 NALCNQ8IZF0 1738 aa33.37■■■□□ 2.93
LINC01003-201ENST00000564834 NUTM2FA1L443 756 aa33.37■■■□□ 2.93
LINC01003-201ENST00000564834 ZNF521Q96K83 1311 aa33.37■■■□□ 2.93
LINC01003-201ENST00000564834 NME9Q86XW9 330 aa33.36■■■□□ 2.93
LINC01003-201ENST00000564834 USP6P35125 1406 aa33.36■■■□□ 2.93
LINC01003-201ENST00000564834 PNPLA6Q8IY17 1366 aa33.35■■■□□ 2.93
LINC01003-201ENST00000564834 APAF1O14727 1248 aa33.34■■■□□ 2.93
LINC01003-201ENST00000564834 CDCA7LQ96GN5 454 aa33.34■■■□□ 2.93
LINC01003-201ENST00000564834 RNF123Q5XPI4 1314 aa33.33■■■□□ 2.93
LINC01003-201ENST00000564834 NWD1Q149M9 1564 aa33.32■■■□□ 2.92
LINC01003-201ENST00000564834 AATKQ6ZMQ8 1374 aa33.32■■■□□ 2.92
LINC01003-201ENST00000564834 ERICH6BQ5W0A0 696 aa33.31■■■□□ 2.92
LINC01003-201ENST00000564834 RUNDC1Q96C34 613 aa33.31■■■□□ 2.92
LINC01003-201ENST00000564834 COG3Q96JB2 828 aa33.31■■■□□ 2.92
LINC01003-201ENST00000564834 TTC21BQ7Z4L5 1316 aa33.3■■■□□ 2.92
LINC01003-201ENST00000564834 IQSEC2Q5JU85 1478 aa33.3■■■□□ 2.92
LINC01003-201ENST00000564834 POLKQ9UBT6 870 aa33.28■■■□□ 2.92
LINC01003-201ENST00000564834 SSH2Q76I76 1423 aa33.28■■■□□ 2.92
LINC01003-201ENST00000564834 GOLGA2Q08379 1002 aa33.26■■■□□ 2.92
LINC01003-201ENST00000564834 ADGRL3Q9HAR2 1447 aa33.26■■■□□ 2.91
LINC01003-201ENST00000564834 U2AF1L5P0DN76 240 aaPredicted RBP33.26■■■□□ 2.91
LINC01003-201ENST00000564834 U2AF1Q01081 240 aaKnown RBP eCLIP33.26■■■□□ 2.91
LINC01003-201ENST00000564834 IRX6P78412 446 aaPredicted RBP33.25■■■□□ 2.91
LINC01003-201ENST00000564834 ZRANB1Q9UGI0 708 aa33.25■■■□□ 2.91
LINC01003-201ENST00000564834 OVOS2A0A0J9YW53 1432 aa33.24■■■□□ 2.91
LINC01003-201ENST00000564834 OVOS2Q6IE36 1432 aa33.24■■■□□ 2.91
LINC01003-201ENST00000564834 CDK12Q9NYV4 1490 aaPredicted RBP33.24■■■□□ 2.91
LINC01003-201ENST00000564834 DIAPH1O60610 1272 aaKnown RBP33.23■■■□□ 2.91
LINC01003-201ENST00000564834 PMFBP1Q8TBY8 1022 aa33.23■■■□□ 2.91
LINC01003-201ENST00000564834 TTC21AQ8NDW8 1320 aa33.23■■■□□ 2.91
LINC01003-201ENST00000564834 RCAN3Q9UKA8 241 aa33.21■■■□□ 2.91
LINC01003-201ENST00000564834 NGDNQ8NEJ9 315 aaKnown RBP33.21■■■□□ 2.91
LINC01003-201ENST00000564834 NCBP3Q53F19 620 aaKnown RBP33.19■■■□□ 2.9
LINC01003-201ENST00000564834 U2SURPO15042 1029 aaKnown RBP33.19■■■□□ 2.9
LINC01003-201ENST00000564834 FBLN1P23142 703 aa33.19■■■□□ 2.9
LINC01003-201ENST00000564834 DUSP27Q5VZP5 1158 aa33.19■■■□□ 2.9
LINC01003-201ENST00000564834 TCP11L2Q8N4U5 519 aa33.19■■■□□ 2.9
LINC01003-201ENST00000564834 SLFN5Q08AF3 891 aa33.17■■■□□ 2.9
LINC01003-201ENST00000564834 EMILIN1Q9Y6C2 1016 aa33.16■■■□□ 2.9
LINC01003-201ENST00000564834 PPM1GO15355 546 aaPredicted RBP33.15■■■□□ 2.9
LINC01003-201ENST00000564834 WWC1Q8IX03 1113 aa33.14■■■□□ 2.9
LINC01003-201ENST00000564834 TRMT2AQ8IZ69 625 aaKnown RBP33.14■■■□□ 2.9
LINC01003-201ENST00000564834 USP31Q70CQ4 1352 aa33.14■■■□□ 2.9
LINC01003-201ENST00000564834 PHF23Q9BUL5 403 aaPredicted RBP33.14■■■□□ 2.9
LINC01003-201ENST00000564834 CCDC27Q2M243 656 aa33.13■■■□□ 2.89
LINC01003-201ENST00000564834 PIK3C2AO00443 1686 aa33.12■■■□□ 2.89
LINC01003-201ENST00000564834 E9PSI1 815 aa33.12■■■□□ 2.89
LINC01003-201ENST00000564834 PLEKHF1Q96S99 279 aa33.12■■■□□ 2.89
LINC01003-201ENST00000564834 RBM33Q96EV2 1170 aaKnown RBP33.11■■■□□ 2.89
LINC01003-201ENST00000564834 PNNQ9H307 717 aaKnown RBP33.11■■■□□ 2.89
LINC01003-201ENST00000564834 USP54Q70EL1 1684 aa33.1■■■□□ 2.89
LINC01003-201ENST00000564834 RRP1P56182 461 aaKnown RBP33.09■■■□□ 2.89
LINC01003-201ENST00000564834 RRS1Q15050 365 aaKnown RBP33.09■■■□□ 2.89
LINC01003-201ENST00000564834 RRP7AQ9Y3A4 280 aaKnown RBP33.08■■■□□ 2.89
LINC01003-201ENST00000564834 LRRC7Q96NW7 1537 aa33.07■■■□□ 2.88
LINC01003-201ENST00000564834 FCHSD2O94868 740 aa33.06■■■□□ 2.88
LINC01003-201ENST00000564834 NEUROD2Q15784 382 aa33.06■■■□□ 2.88
LINC01003-201ENST00000564834 PHF8Q9UPP1 1060 aa33.06■■■□□ 2.88
LINC01003-201ENST00000564834 C14orf37Q86TY3 774 aa33.06■■■□□ 2.88
LINC01003-201ENST00000564834 PELP1Q8IZL8 1130 aaKnown RBP33.06■■■□□ 2.88
LINC01003-201ENST00000564834 SPINK5Q9NQ38 1064 aaPredicted RBP33.06■■■□□ 2.88
LINC01003-201ENST00000564834 PPP4R2Q9NY27 417 aa33.06■■■□□ 2.88
LINC01003-201ENST00000564834 MAPK8IP3Q9UPT6 1336 aa33.05■■■□□ 2.88
LINC01003-201ENST00000564834 IL13P35225 146 aa33.05■■■□□ 2.88
LINC01003-201ENST00000564834 WDR63Q8IWG1 891 aa33.04■■■□□ 2.88
LINC01003-201ENST00000564834 PROSER2Q86WR7 435 aaPredicted RBP33.04■■■□□ 2.88
LINC01003-201ENST00000564834 DMRT2Q9Y5R5 561 aa33.04■■■□□ 2.88
LINC01003-201ENST00000564834 MARF1Q9Y4F3 1742 aaKnown RBP33.02■■■□□ 2.88
LINC01003-201ENST00000564834 STRCP1A6NGW2 1772 aa33.02■■■□□ 2.88
LINC01003-201ENST00000564834 PEAK1Q9H792 1746 aa33.01■■■□□ 2.88
LINC01003-201ENST00000564834 RSPH6AQ9H0K4 717 aa33.01■■■□□ 2.87
LINC01003-201ENST00000564834 LMTK3Q96Q04 1460 aa33■■■□□ 2.87
LINC01003-201ENST00000564834 TMPOP42166 694 aaKnown RBP32.99■■■□□ 2.87
LINC01003-201ENST00000564834 HSPA2P54652 639 aa32.98■■■□□ 2.87
LINC01003-201ENST00000564834 ESCO1Q5FWF5 840 aa32.96■■■□□ 2.87
LINC01003-201ENST00000564834 NCOA3Q9Y6Q9 1424 aa32.95■■■□□ 2.87
LINC01003-201ENST00000564834 NEFMP07197 916 aa32.94■■■□□ 2.86
LINC01003-201ENST00000564834 PRKAR2BP31323 418 aa32.94■■■□□ 2.86
LINC01003-201ENST00000564834 NLRP6P59044 892 aa32.94■■■□□ 2.86
LINC01003-201ENST00000564834 C19orf44Q9H6X5 657 aa32.93■■■□□ 2.86
LINC01003-201ENST00000564834 STRCQ7RTU9 1775 aa32.92■■■□□ 2.86
LINC01003-201ENST00000564834 KIF1AQ12756 1690 aa32.92■■■□□ 2.86
LINC01003-201ENST00000564834 ABTB2Q8N961 1025 aa32.91■■■□□ 2.86
LINC01003-201ENST00000564834 SBNO1A3KN83 1393 aa32.91■■■□□ 2.86
LINC01003-201ENST00000564834 MAP3K19Q56UN5 1328 aa32.91■■■□□ 2.86
LINC01003-201ENST00000564834 RGPD1P0DJD0 1748 aa32.91■■■□□ 2.86
LINC01003-201ENST00000564834 HMOX1P09601 288 aa32.91■■■□□ 2.86
LINC01003-201ENST00000564834 DCCP43146 1447 aa32.9■■■□□ 2.86
LINC01003-201ENST00000564834 PAK3O75914 559 aaPredicted RBP32.9■■■□□ 2.86
LINC01003-201ENST00000564834 EIF4A2Q14240 407 aaKnown RBP32.9■■■□□ 2.86
LINC01003-201ENST00000564834 TRIM35Q9UPQ4 493 aa32.9■■■□□ 2.86
LINC01003-201ENST00000564834 FLT4P35916 1363 aa32.9■■■□□ 2.86
LINC01003-201ENST00000564834 TMEM94Q12767 1356 aa32.89■■■□□ 2.86
LINC01003-201ENST00000564834 SOX12O15370 315 aa32.88■■■□□ 2.85
LINC01003-201ENST00000564834 RIPK4P57078 832 aa32.88■■■□□ 2.85
LINC01003-201ENST00000564834 C1orf167Q5SNV9 1468 aa32.87■■■□□ 2.85
LINC01003-201ENST00000564834 KIF24Q5T7B8 1368 aa32.87■■■□□ 2.85
LINC01003-201ENST00000564834 PSME1Q06323 249 aa32.87■■■□□ 2.85
LINC01003-201ENST00000564834 MYH16Q9H6N6 1097 aa32.87■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms