RNA–Protein interactions for RNA: ENST00000564421.1

CPNE7-207, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-207ENST00000564421 USP6P35125 1406 aa23.91■■□□□ 1.42
CPNE7-207ENST00000564421 CPSF1Q10570 1443 aaKnown RBP23.9■■□□□ 1.42
CPNE7-207ENST00000564421 NRKQ7Z2Y5 1582 aa23.9■■□□□ 1.42
CPNE7-207ENST00000564421 NUTM2BA6NNL0 878 aaPredicted RBP23.89■■□□□ 1.41
CPNE7-207ENST00000564421 NUTM2EB1AL46 878 aaPredicted RBP23.89■■□□□ 1.41
CPNE7-207ENST00000564421 NUTM2AQ8IVF1 878 aaPredicted RBP23.89■■□□□ 1.41
CPNE7-207ENST00000564421 PAK3O75914 559 aaPredicted RBP23.88■■□□□ 1.41
CPNE7-207ENST00000564421 CD163L1Q9NR16 1453 aa23.87■■□□□ 1.41
CPNE7-207ENST00000564421 SSH2Q76I76 1423 aa23.87■■□□□ 1.41
CPNE7-207ENST00000564421 LMOD2Q6P5Q4 547 aa23.87■■□□□ 1.41
CPNE7-207ENST00000564421 ZNF316A6NFI3 1004 aaPredicted RBP23.86■■□□□ 1.41
CPNE7-207ENST00000564421 TMC1Q8TDI8 760 aa23.86■■□□□ 1.41
CPNE7-207ENST00000564421 MYOM1P52179 1685 aa23.86■■□□□ 1.41
CPNE7-207ENST00000564421 MEX3CQ5U5Q3 659 aaKnown RBP23.85■■□□□ 1.41
CPNE7-207ENST00000564421 SLC12A5Q9H2X9 1139 aa23.85■■□□□ 1.41
CPNE7-207ENST00000564421 PHRF1Q9P1Y6 1649 aaKnown RBP23.84■■□□□ 1.41
CPNE7-207ENST00000564421 KTN1Q86UP2 1357 aaKnown RBP23.84■■□□□ 1.41
CPNE7-207ENST00000564421 PHF23Q9BUL5 403 aaPredicted RBP23.84■■□□□ 1.41
CPNE7-207ENST00000564421 PIK3C2AO00443 1686 aa23.83■■□□□ 1.41
CPNE7-207ENST00000564421 HDGFL2Q7Z4V5 671 aaPredicted RBP23.82■■□□□ 1.4
CPNE7-207ENST00000564421 TERF2IPQ9NYB0 399 aa23.82■■□□□ 1.4
CPNE7-207ENST00000564421 A0A1W2PP64 1363 aa23.8■■□□□ 1.4
CPNE7-207ENST00000564421 ADAMTS2O95450 1211 aa23.8■■□□□ 1.4
CPNE7-207ENST00000564421 ABTB2Q8N961 1025 aa23.8■■□□□ 1.4
CPNE7-207ENST00000564421 TTC21AQ8NDW8 1320 aa23.8■■□□□ 1.4
CPNE7-207ENST00000564421 USP54Q70EL1 1684 aa23.79■■□□□ 1.4
CPNE7-207ENST00000564421 CABLES1Q8TDN4 633 aa23.79■■□□□ 1.4
CPNE7-207ENST00000564421 TTC21BQ7Z4L5 1316 aa23.79■■□□□ 1.4
CPNE7-207ENST00000564421 ANKRD36BQ8N2N9 1353 aa23.78■■□□□ 1.4
CPNE7-207ENST00000564421 C11orf95C9JLR9 678 aaPredicted RBP23.78■■□□□ 1.4
CPNE7-207ENST00000564421 EDC4Q6P2E9 1401 aaKnown RBP23.77■■□□□ 1.4
CPNE7-207ENST00000564421 HAP1P54257 671 aaPredicted RBP23.77■■□□□ 1.4
CPNE7-207ENST00000564421 NLRP13Q86W25 1043 aa23.76■■□□□ 1.39
CPNE7-207ENST00000564421 C8orf37Q96NL8 207 aa23.76■■□□□ 1.39
CPNE7-207ENST00000564421 RGS17Q9UGC6 210 aaPredicted RBP23.76■■□□□ 1.39
CPNE7-207ENST00000564421 NWD2Q9ULI1 1742 aa23.76■■□□□ 1.39
CPNE7-207ENST00000564421 POLR3GLQ9BT43 218 aa23.75■■□□□ 1.39
CPNE7-207ENST00000564421 PLCH1Q4KWH8 1693 aa23.75■■□□□ 1.39
CPNE7-207ENST00000564421 USP19O94966 1318 aa23.75■■□□□ 1.39
CPNE7-207ENST00000564421 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.75■■□□□ 1.39
CPNE7-207ENST00000564421 NUTM2GQ5VZR2 741 aa23.74■■□□□ 1.39
CPNE7-207ENST00000564421 AFF2P51816 1311 aa23.74■■□□□ 1.39
CPNE7-207ENST00000564421 KIF7Q2M1P5 1343 aa23.74■■□□□ 1.39
CPNE7-207ENST00000564421 SLIT3O75094 1523 aa23.74■■□□□ 1.39
CPNE7-207ENST00000564421 COL14A1Q05707 1796 aaKnown RBP23.73■■□□□ 1.39
CPNE7-207ENST00000564421 ZNF772Q68DY9 489 aaPredicted RBP23.73■■□□□ 1.39
CPNE7-207ENST00000564421 NGLY1Q96IV0 654 aa23.73■■□□□ 1.39
CPNE7-207ENST00000564421 PLEKHG5O94827 1062 aa23.72■■□□□ 1.39
CPNE7-207ENST00000564421 NLRP6P59044 892 aa23.72■■□□□ 1.39
CPNE7-207ENST00000564421 FNBP4Q8N3X1 1017 aaPredicted RBP23.72■■□□□ 1.39
CPNE7-207ENST00000564421 WASHC2AQ641Q2 1341 aa23.72■■□□□ 1.39
CPNE7-207ENST00000564421 CCDC7Q96M83 1385 aa23.72■■□□□ 1.39
CPNE7-207ENST00000564421 KIF20BQ96Q89 1820 aa23.71■■□□□ 1.39
CPNE7-207ENST00000564421 USP31Q70CQ4 1352 aa23.7■■□□□ 1.38
CPNE7-207ENST00000564421 SLIT2O94813 1529 aa23.69■■□□□ 1.38
CPNE7-207ENST00000564421 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.69■■□□□ 1.38
CPNE7-207ENST00000564421 NRAPQ86VF7 1730 aa23.67■■□□□ 1.38
CPNE7-207ENST00000564421 GCP02774 474 aa23.66■■□□□ 1.38
CPNE7-207ENST00000564421 USP21Q9UK80 565 aa23.66■■□□□ 1.38
CPNE7-207ENST00000564421 BCL9LQ86UU0 1499 aa23.66■■□□□ 1.38
CPNE7-207ENST00000564421 CPDO75976 1380 aa23.65■■□□□ 1.38
CPNE7-207ENST00000564421 POTEAQ6S8J7 498 aa23.65■■□□□ 1.38
CPNE7-207ENST00000564421 NME9Q86XW9 330 aa23.65■■□□□ 1.38
CPNE7-207ENST00000564421 KIAA0232Q92628 1395 aa23.65■■□□□ 1.38
CPNE7-207ENST00000564421 FAM83GA6ND36 823 aa23.64■■□□□ 1.37
CPNE7-207ENST00000564421 KCNH5Q8NCM2 988 aa23.64■■□□□ 1.37
CPNE7-207ENST00000564421 OVOS2A0A0J9YW53 1432 aa23.63■■□□□ 1.37
CPNE7-207ENST00000564421 OVOS2Q6IE36 1432 aa23.63■■□□□ 1.37
CPNE7-207ENST00000564421 PRDM11Q9NQV5 511 aa23.63■■□□□ 1.37
CPNE7-207ENST00000564421 NFAT5O94916 1531 aa23.63■■□□□ 1.37
CPNE7-207ENST00000564421 LTN1O94822 1766 aa23.63■■□□□ 1.37
CPNE7-207ENST00000564421 LMO7Q8WWI1 1683 aa23.62■■□□□ 1.37
CPNE7-207ENST00000564421 NSD3Q9BZ95 1437 aa23.61■■□□□ 1.37
CPNE7-207ENST00000564421 COL18A1P39060 1754 aa23.61■■□□□ 1.37
CPNE7-207ENST00000564421 ZC3H6P61129 1189 aaKnown RBP23.61■■□□□ 1.37
CPNE7-207ENST00000564421 UNC5CLQ8IV45 518 aa23.61■■□□□ 1.37
CPNE7-207ENST00000564421 CARD14Q9BXL6 1004 aa23.61■■□□□ 1.37
CPNE7-207ENST00000564421 ZRANB1Q9UGI0 708 aa23.61■■□□□ 1.37
CPNE7-207ENST00000564421 ATRNO75882 1429 aa23.6■■□□□ 1.37
CPNE7-207ENST00000564421 QTRT2Q9H974 415 aaKnown RBP23.6■■□□□ 1.37
CPNE7-207ENST00000564421 TRPC5Q9UL62 973 aaPredicted RBP23.6■■□□□ 1.37
CPNE7-207ENST00000564421 ANKRD26Q9UPS8 1709 aa23.59■■□□□ 1.37
CPNE7-207ENST00000564421 DDX10Q13206 875 aaKnown RBP23.59■■□□□ 1.37
CPNE7-207ENST00000564421 RGPD5Q99666 1765 aa23.58■■□□□ 1.37
CPNE7-207ENST00000564421 FYB1O15117 783 aa23.57■■□□□ 1.36
CPNE7-207ENST00000564421 COG3Q96JB2 828 aa23.57■■□□□ 1.36
CPNE7-207ENST00000564421 BTG4Q9NY30 223 aa23.57■■□□□ 1.36
CPNE7-207ENST00000564421 ABCC6O95255 1503 aa23.57■■□□□ 1.36
CPNE7-207ENST00000564421 PANK3Q9H999 370 aa23.56■■□□□ 1.36
CPNE7-207ENST00000564421 RXRBP28702 533 aa23.55■■□□□ 1.36
CPNE7-207ENST00000564421 RBM6P78332 1123 aaKnown RBP23.55■■□□□ 1.36
CPNE7-207ENST00000564421 CHRNA2Q15822 529 aa23.55■■□□□ 1.36
CPNE7-207ENST00000564421 CAMTA1Q9Y6Y1 1673 aa23.54■■□□□ 1.36
CPNE7-207ENST00000564421 AATKQ6ZMQ8 1374 aa23.54■■□□□ 1.36
CPNE7-207ENST00000564421 ARHGEF25Q86VW2 580 aa23.54■■□□□ 1.36
CPNE7-207ENST00000564421 CDK12Q9NYV4 1490 aaPredicted RBP23.54■■□□□ 1.36
CPNE7-207ENST00000564421 VPS72Q15906 364 aa23.53■■□□□ 1.36
CPNE7-207ENST00000564421 CGNL1Q0VF96 1302 aa23.53■■□□□ 1.36
CPNE7-207ENST00000564421 GLI3P10071 1580 aa23.52■■□□□ 1.36
CPNE7-207ENST00000564421 GGNBP2Q9H3C7 697 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms