RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 PPIP5K1Q6PFW1 1433 aa25.71■■□□□ 1.71
PKD1-227ENST00000564313 POLR3AO14802 1390 aaPredicted RBP25.71■■□□□ 1.71
PKD1-227ENST00000564313 CCDC125Q86Z20 511 aa25.71■■□□□ 1.71
PKD1-227ENST00000564313 COL22A1Q8NFW1 1626 aaPredicted RBP25.7■■□□□ 1.71
PKD1-227ENST00000564313 TNS3Q68CZ2 1445 aa25.7■■□□□ 1.7
PKD1-227ENST00000564313 SPATA31A3Q5VYP0 1347 aa25.69■■□□□ 1.7
PKD1-227ENST00000564313 PUS7Q96PZ0 661 aaKnown RBP25.69■■□□□ 1.7
PKD1-227ENST00000564313 TESK2Q96S53 571 aa25.68■■□□□ 1.7
PKD1-227ENST00000564313 ARHGEF10O15013 1369 aa25.67■■□□□ 1.7
PKD1-227ENST00000564313 TRPM3Q9HCF6 1732 aaPredicted RBP25.66■■□□□ 1.7
PKD1-227ENST00000564313 ACEP12821 1306 aa25.65■■□□□ 1.7
PKD1-227ENST00000564313 BRD4O60885 1362 aaPredicted RBP25.64■■□□□ 1.69
PKD1-227ENST00000564313 TMF1P82094 1093 aa25.63■■□□□ 1.69
PKD1-227ENST00000564313 BCL9LQ86UU0 1499 aa25.62■■□□□ 1.69
PKD1-227ENST00000564313 CABP1Q9NZU7 370 aa25.62■■□□□ 1.69
PKD1-227ENST00000564313 EIF4G2P78344 907 aaKnown RBP eCLIP25.61■■□□□ 1.69
PKD1-227ENST00000564313 ALS2Q96Q42 1657 aa25.61■■□□□ 1.69
PKD1-227ENST00000564313 CDCA8Q53HL2 280 aa25.6■■□□□ 1.69
PKD1-227ENST00000564313 NINLQ9Y2I6 1382 aa25.59■■□□□ 1.69
PKD1-227ENST00000564313 ZNF692Q9BU19 519 aaPredicted RBP25.59■■□□□ 1.69
PKD1-227ENST00000564313 GJD4Q96KN9 370 aaPredicted RBP25.58■■□□□ 1.69
PKD1-227ENST00000564313 PAK3O75914 559 aaPredicted RBP25.57■■□□□ 1.68
PKD1-227ENST00000564313 LMOD2Q6P5Q4 547 aa25.57■■□□□ 1.68
PKD1-227ENST00000564313 AKAP12Q02952 1782 aa25.56■■□□□ 1.68
PKD1-227ENST00000564313 USP6P35125 1406 aa25.56■■□□□ 1.68
PKD1-227ENST00000564313 BLMP54132 1417 aaPredicted RBP25.55■■□□□ 1.68
PKD1-227ENST00000564313 DEFB132Q7Z7B7 95 aa25.54■■□□□ 1.68
PKD1-227ENST00000564313 CPSF1Q10570 1443 aaKnown RBP25.54■■□□□ 1.68
PKD1-227ENST00000564313 MARF1Q9Y4F3 1742 aaKnown RBP25.53■■□□□ 1.68
PKD1-227ENST00000564313 TMC1Q8TDI8 760 aa25.52■■□□□ 1.68
PKD1-227ENST00000564313 CABLES1Q8TDN4 633 aa25.52■■□□□ 1.68
PKD1-227ENST00000564313 ABCA3Q99758 1704 aa25.51■■□□□ 1.68
PKD1-227ENST00000564313 PLEKHG5O94827 1062 aa25.51■■□□□ 1.67
PKD1-227ENST00000564313 HSPA5P11021 654 aaKnown RBP25.51■■□□□ 1.67
PKD1-227ENST00000564313 HAP1P54257 671 aaPredicted RBP25.51■■□□□ 1.67
PKD1-227ENST00000564313 LRP5O75197 1615 aa25.5■■□□□ 1.67
PKD1-227ENST00000564313 MON2Q7Z3U7 1717 aa25.5■■□□□ 1.67
PKD1-227ENST00000564313 HDGFL2Q7Z4V5 671 aaPredicted RBP25.5■■□□□ 1.67
PKD1-227ENST00000564313 TERF2IPQ9NYB0 399 aa25.5■■□□□ 1.67
PKD1-227ENST00000564313 SSH2Q76I76 1423 aa25.49■■□□□ 1.67
PKD1-227ENST00000564313 KTN1Q86UP2 1357 aaKnown RBP25.49■■□□□ 1.67
PKD1-227ENST00000564313 GLI3P10071 1580 aa25.48■■□□□ 1.67
PKD1-227ENST00000564313 NRKQ7Z2Y5 1582 aa25.48■■□□□ 1.67
PKD1-227ENST00000564313 CD163L1Q9NR16 1453 aa25.47■■□□□ 1.67
PKD1-227ENST00000564313 TTC21AQ8NDW8 1320 aa25.47■■□□□ 1.67
PKD1-227ENST00000564313 ABTB2Q8N961 1025 aa25.47■■□□□ 1.67
PKD1-227ENST00000564313 SLC12A5Q9H2X9 1139 aa25.47■■□□□ 1.67
PKD1-227ENST00000564313 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.46■■□□□ 1.67
PKD1-227ENST00000564313 CRYBG1Q9Y4K1 1723 aa25.46■■□□□ 1.67
PKD1-227ENST00000564313 UNC5CLQ8IV45 518 aa25.45■■□□□ 1.66
PKD1-227ENST00000564313 BRWD3Q6RI45 1802 aa25.44■■□□□ 1.66
PKD1-227ENST00000564313 NLRP13Q86W25 1043 aa25.44■■□□□ 1.66
PKD1-227ENST00000564313 A0A1W2PP64 1363 aa25.44■■□□□ 1.66
PKD1-227ENST00000564313 TTC21BQ7Z4L5 1316 aa25.43■■□□□ 1.66
PKD1-227ENST00000564313 SF3B2Q13435 895 aaKnown RBP25.43■■□□□ 1.66
PKD1-227ENST00000564313 EDC4Q6P2E9 1401 aaKnown RBP25.43■■□□□ 1.66
PKD1-227ENST00000564313 ANKRD36BQ8N2N9 1353 aa25.43■■□□□ 1.66
PKD1-227ENST00000564313 SLIT2O94813 1529 aa25.42■■□□□ 1.66
PKD1-227ENST00000564313 PHRF1Q9P1Y6 1649 aaKnown RBP25.42■■□□□ 1.66
PKD1-227ENST00000564313 PIK3C2AO00443 1686 aa25.41■■□□□ 1.66
PKD1-227ENST00000564313 USP19O94966 1318 aa25.4■■□□□ 1.66
PKD1-227ENST00000564313 NUTM2GQ5VZR2 741 aa25.4■■□□□ 1.66
PKD1-227ENST00000564313 MYOM1P52179 1685 aa25.39■■□□□ 1.65
PKD1-227ENST00000564313 PSDA5PKW4 1024 aaPredicted RBP25.38■■□□□ 1.65
PKD1-227ENST00000564313 NLRP6P59044 892 aa25.38■■□□□ 1.65
PKD1-227ENST00000564313 SEPT12Q8IYM1 358 aa25.38■■□□□ 1.65
PKD1-227ENST00000564313 FAM83GA6ND36 823 aa25.36■■□□□ 1.65
PKD1-227ENST00000564313 USP54Q70EL1 1684 aa25.36■■□□□ 1.65
PKD1-227ENST00000564313 NWD2Q9ULI1 1742 aa25.35■■□□□ 1.65
PKD1-227ENST00000564313 SLIT3O75094 1523 aa25.35■■□□□ 1.65
PKD1-227ENST00000564313 COL14A1Q05707 1796 aaKnown RBP25.35■■□□□ 1.65
PKD1-227ENST00000564313 USP31Q70CQ4 1352 aa25.33■■□□□ 1.65
PKD1-227ENST00000564313 PLCH1Q4KWH8 1693 aa25.33■■□□□ 1.65
PKD1-227ENST00000564313 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.33■■□□□ 1.65
PKD1-227ENST00000564313 GCP02774 474 aa25.32■■□□□ 1.64
PKD1-227ENST00000564313 KCNH5Q8NCM2 988 aa25.32■■□□□ 1.64
PKD1-227ENST00000564313 CPDO75976 1380 aa25.31■■□□□ 1.64
PKD1-227ENST00000564313 PRDM11Q9NQV5 511 aa25.31■■□□□ 1.64
PKD1-227ENST00000564313 VPS72Q15906 364 aa25.3■■□□□ 1.64
PKD1-227ENST00000564313 KRT27Q7Z3Y8 459 aa25.3■■□□□ 1.64
PKD1-227ENST00000564313 POLR3GLQ9BT43 218 aa25.3■■□□□ 1.64
PKD1-227ENST00000564313 KIAA0232Q92628 1395 aa25.3■■□□□ 1.64
PKD1-227ENST00000564313 ONECUT3O60422 494 aaPredicted RBP25.29■■□□□ 1.64
PKD1-227ENST00000564313 ZEB1P37275 1124 aaPredicted RBP25.28■■□□□ 1.64
PKD1-227ENST00000564313 BAG6P46379 1132 aa25.27■■□□□ 1.64
PKD1-227ENST00000564313 ZC3H6P61129 1189 aaKnown RBP25.27■■□□□ 1.64
PKD1-227ENST00000564313 NME9Q86XW9 330 aa25.27■■□□□ 1.64
PKD1-227ENST00000564313 BTG4Q9NY30 223 aa25.26■■□□□ 1.63
PKD1-227ENST00000564313 CCDC9Q9Y3X0 531 aaKnown RBP25.25■■□□□ 1.63
PKD1-227ENST00000564313 OVOS2A0A0J9YW53 1432 aa25.25■■□□□ 1.63
PKD1-227ENST00000564313 OVOS2Q6IE36 1432 aa25.25■■□□□ 1.63
PKD1-227ENST00000564313 NRAPQ86VF7 1730 aa25.24■■□□□ 1.63
PKD1-227ENST00000564313 CHRNA2Q15822 529 aa25.24■■□□□ 1.63
PKD1-227ENST00000564313 KIF7Q2M1P5 1343 aa25.23■■□□□ 1.63
PKD1-227ENST00000564313 C11orf95C9JLR9 678 aaPredicted RBP25.23■■□□□ 1.63
PKD1-227ENST00000564313 NFAT5O94916 1531 aa25.22■■□□□ 1.63
PKD1-227ENST00000564313 NSD3Q9BZ95 1437 aa25.22■■□□□ 1.63
PKD1-227ENST00000564313 KIF20BQ96Q89 1820 aa25.22■■□□□ 1.63
PKD1-227ENST00000564313 COG3Q96JB2 828 aa25.22■■□□□ 1.63
PKD1-227ENST00000564313 ABCC6O95255 1503 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms