RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 EIF3AQ14152 1382 aaKnown RBP27.63■■■□□ 2.01
SLX1A-204ENST00000563995 CENPJQ9HC77 1338 aaPredicted RBP27.63■■■□□ 2.01
SLX1A-204ENST00000563995 ARHGEF10O15013 1369 aa27.62■■■□□ 2.01
SLX1A-204ENST00000563995 VPS72Q15906 364 aa27.62■■■□□ 2.01
SLX1A-204ENST00000563995 MINK1Q8N4C8 1332 aaPredicted RBP27.62■■■□□ 2.01
SLX1A-204ENST00000563995 CRYBG1Q9Y4K1 1723 aa27.61■■■□□ 2.01
SLX1A-204ENST00000563995 SEPT12Q8IYM1 358 aa27.6■■■□□ 2.01
SLX1A-204ENST00000563995 QRICH2Q9H0J4 1663 aa27.59■■■□□ 2.01
SLX1A-204ENST00000563995 HAP1P54257 671 aaPredicted RBP27.59■■■□□ 2.01
SLX1A-204ENST00000563995 HIRIP3Q9BW71 556 aaPredicted RBP27.59■■■□□ 2.01
SLX1A-204ENST00000563995 ONECUT3O60422 494 aaPredicted RBP27.58■■■□□ 2.01
SLX1A-204ENST00000563995 YY1P25490 414 aa27.58■■■□□ 2.01
SLX1A-204ENST00000563995 COL14A1Q05707 1796 aaKnown RBP27.57■■■□□ 2
SLX1A-204ENST00000563995 TULP4Q9NRJ4 1543 aa27.55■■■□□ 2
SLX1A-204ENST00000563995 WASLO00401 505 aaPredicted RBP27.54■■■□□ 2
SLX1A-204ENST00000563995 PLEKHG5O94827 1062 aa27.54■■■□□ 2
SLX1A-204ENST00000563995 BAG6P46379 1132 aa27.54■■■□□ 2
SLX1A-204ENST00000563995 PMFBP1Q8TBY8 1022 aa27.54■■■□□ 2
SLX1A-204ENST00000563995 FAM83GA6ND36 823 aa27.53■■■□□ 2
SLX1A-204ENST00000563995 LMOD2Q6P5Q4 547 aa27.53■■■□□ 2
SLX1A-204ENST00000563995 CCDC9Q9Y3X0 531 aaKnown RBP27.51■■□□□ 1.99
SLX1A-204ENST00000563995 ITSN1Q15811 1721 aa27.5■■□□□ 1.99
SLX1A-204ENST00000563995 USP47Q96K76 1375 aa27.5■■□□□ 1.99
SLX1A-204ENST00000563995 PRR36Q9H6K5 1346 aa27.5■■□□□ 1.99
SLX1A-204ENST00000563995 KRT27Q7Z3Y8 459 aa27.5■■□□□ 1.99
SLX1A-204ENST00000563995 SBNO2Q9Y2G9 1366 aa27.49■■□□□ 1.99
SLX1A-204ENST00000563995 RGPD1P0DJD0 1748 aa27.49■■□□□ 1.99
SLX1A-204ENST00000563995 THSD7AQ9UPZ6 1657 aa27.47■■□□□ 1.99
SLX1A-204ENST00000563995 CDK19Q9BWU1 502 aa27.47■■□□□ 1.99
SLX1A-204ENST00000563995 R3HDM1Q15032 1099 aaKnown RBP27.45■■□□□ 1.98
SLX1A-204ENST00000563995 TNS1Q9HBL0 1735 aaKnown RBP27.44■■□□□ 1.98
SLX1A-204ENST00000563995 ST20-MTHFSA0A0A6YYL1 179 aa27.44■■□□□ 1.98
SLX1A-204ENST00000563995 PHRF1Q9P1Y6 1649 aaKnown RBP27.44■■□□□ 1.98
SLX1A-204ENST00000563995 ATP7BP35670 1465 aa27.44■■□□□ 1.98
SLX1A-204ENST00000563995 EVC2Q86UK5 1308 aa27.43■■□□□ 1.98
SLX1A-204ENST00000563995 BTG4Q9NY30 223 aa27.43■■□□□ 1.98
SLX1A-204ENST00000563995 FAM98CQ17RN3 349 aaKnown RBP27.41■■□□□ 1.98
SLX1A-204ENST00000563995 TOPAZ1Q8N9V7 1692 aa27.4■■□□□ 1.98
SLX1A-204ENST00000563995 SRPK2P78362 688 aaKnown RBP27.4■■□□□ 1.98
SLX1A-204ENST00000563995 EN1Q05925 392 aaPredicted RBP27.4■■□□□ 1.98
SLX1A-204ENST00000563995 NUDT16Q96DE0 195 aaKnown RBP27.4■■□□□ 1.98
SLX1A-204ENST00000563995 TESK2Q96S53 571 aa27.4■■□□□ 1.98
SLX1A-204ENST00000563995 A0A0G2JS52 829 aa27.38■■□□□ 1.97
SLX1A-204ENST00000563995 MYT1Q01538 1121 aa27.38■■□□□ 1.97
SLX1A-204ENST00000563995 CABP2Q9NPB3 220 aa27.38■■□□□ 1.97
SLX1A-204ENST00000563995 SPATA31A5Q5VU36 1347 aa27.38■■□□□ 1.97
SLX1A-204ENST00000563995 SPATA31A7Q8IWB4 1347 aa27.38■■□□□ 1.97
SLX1A-204ENST00000563995 SLC24A1O60721 1099 aa27.35■■□□□ 1.97
SLX1A-204ENST00000563995 EIF4G2P78344 907 aaKnown RBP eCLIP27.34■■□□□ 1.97
SLX1A-204ENST00000563995 CCDC61Q9Y6R9 512 aa27.34■■□□□ 1.97
SLX1A-204ENST00000563995 NGDNQ8NEJ9 315 aaKnown RBP27.33■■□□□ 1.97
SLX1A-204ENST00000563995 DISP2A7MBM2 1401 aa27.33■■□□□ 1.96
SLX1A-204ENST00000563995 PAK3O75914 559 aaPredicted RBP27.3■■□□□ 1.96
SLX1A-204ENST00000563995 HSPA5P11021 654 aaKnown RBP27.3■■□□□ 1.96
SLX1A-204ENST00000563995 PPIP5K1Q6PFW1 1433 aa27.3■■□□□ 1.96
SLX1A-204ENST00000563995 FAM182BQ5T319 152 aa27.29■■□□□ 1.96
SLX1A-204ENST00000563995 PRDM11Q9NQV5 511 aa27.29■■□□□ 1.96
SLX1A-204ENST00000563995 KIAA0232Q92628 1395 aa27.29■■□□□ 1.96
SLX1A-204ENST00000563995 NRKQ7Z2Y5 1582 aa27.28■■□□□ 1.96
SLX1A-204ENST00000563995 PLEKHG3A1L390 1219 aa27.28■■□□□ 1.96
SLX1A-204ENST00000563995 TMF1P82094 1093 aa27.28■■□□□ 1.96
SLX1A-204ENST00000563995 PUS7Q96PZ0 661 aaKnown RBP27.28■■□□□ 1.96
SLX1A-204ENST00000563995 POLR3AO14802 1390 aaPredicted RBP27.26■■□□□ 1.95
SLX1A-204ENST00000563995 SPATA31A1Q5TZJ5 1347 aa27.26■■□□□ 1.95
SLX1A-204ENST00000563995 LMO7Q8WWI1 1683 aa27.25■■□□□ 1.95
SLX1A-204ENST00000563995 IFFO2Q5TF58 517 aa27.24■■□□□ 1.95
SLX1A-204ENST00000563995 CABP1Q9NZU7 370 aa27.24■■□□□ 1.95
SLX1A-204ENST00000563995 ACEP12821 1306 aa27.23■■□□□ 1.95
SLX1A-204ENST00000563995 DCAF8L1A6NGE4 600 aa27.23■■□□□ 1.95
SLX1A-204ENST00000563995 EZH2Q15910 746 aaKnown RBP27.23■■□□□ 1.95
SLX1A-204ENST00000563995 RREB1Q92766 1687 aa27.23■■□□□ 1.95
SLX1A-204ENST00000563995 CHRNA2Q15822 529 aa27.22■■□□□ 1.95
SLX1A-204ENST00000563995 SSH2Q76I76 1423 aa27.19■■□□□ 1.94
SLX1A-204ENST00000563995 ZEB1P37275 1124 aaPredicted RBP27.19■■□□□ 1.94
SLX1A-204ENST00000563995 CDCA8Q53HL2 280 aa27.19■■□□□ 1.94
SLX1A-204ENST00000563995 CAMTA1Q9Y6Y1 1673 aa27.19■■□□□ 1.94
SLX1A-204ENST00000563995 NUP188Q5SRE5 1749 aa27.19■■□□□ 1.94
SLX1A-204ENST00000563995 ZC3H6P61129 1189 aaKnown RBP27.17■■□□□ 1.94
SLX1A-204ENST00000563995 STRN4Q9NRL3 753 aa27.17■■□□□ 1.94
SLX1A-204ENST00000563995 NUTM2GQ5VZR2 741 aa27.16■■□□□ 1.94
SLX1A-204ENST00000563995 NINLQ9Y2I6 1382 aa27.16■■□□□ 1.94
SLX1A-204ENST00000563995 PARP4Q9UKK3 1724 aaKnown RBP27.16■■□□□ 1.94
SLX1A-204ENST00000563995 CAMKK2Q96RR4 588 aa27.15■■□□□ 1.94
SLX1A-204ENST00000563995 FAM196AQ6ZSG2 479 aa27.14■■□□□ 1.94
SLX1A-204ENST00000563995 TMC1Q8TDI8 760 aa27.14■■□□□ 1.94
SLX1A-204ENST00000563995 PPP1R1BQ9UD71 204 aaPredicted RBP27.14■■□□□ 1.94
SLX1A-204ENST00000563995 AKAP12Q02952 1782 aa27.14■■□□□ 1.93
SLX1A-204ENST00000563995 USP19O94966 1318 aa27.14■■□□□ 1.93
SLX1A-204ENST00000563995 CPDO75976 1380 aa27.13■■□□□ 1.93
SLX1A-204ENST00000563995 SENP3-EIF4A1A0A087X0R7 540 aa27.13■■□□□ 1.93
SLX1A-204ENST00000563995 TRIM37O94972 964 aa27.13■■□□□ 1.93
SLX1A-204ENST00000563995 BARGINQ6ZT62 677 aa27.13■■□□□ 1.93
SLX1A-204ENST00000563995 USP6P35125 1406 aa27.13■■□□□ 1.93
SLX1A-204ENST00000563995 CPSF1Q10570 1443 aaKnown RBP27.13■■□□□ 1.93
SLX1A-204ENST00000563995 CD163L1Q9NR16 1453 aa27.13■■□□□ 1.93
SLX1A-204ENST00000563995 SLC12A5Q9H2X9 1139 aa27.12■■□□□ 1.93
SLX1A-204ENST00000563995 BRD4O60885 1362 aaPredicted RBP27.11■■□□□ 1.93
SLX1A-204ENST00000563995 PARD3Q8TEW0 1356 aa27.11■■□□□ 1.93
SLX1A-204ENST00000563995 ZNF692Q9BU19 519 aaPredicted RBP27.11■■□□□ 1.93
SLX1A-204ENST00000563995 USP35Q9P2H5 1018 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms