RNA–Protein interactions for RNA: ENST00000563732.5

PPP4C-207, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

TSL 2

Gene PPP4C, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-207ENST00000563732 LRP6O75581 1613 aa29.23■■■□□ 2.27
PPP4C-207ENST00000563732 WASHC2AQ641Q2 1341 aa29.22■■■□□ 2.27
PPP4C-207ENST00000563732 PSME1Q06323 249 aa29.22■■■□□ 2.27
PPP4C-207ENST00000563732 LRRC59Q96AG4 307 aaKnown RBP29.22■■■□□ 2.27
PPP4C-207ENST00000563732 MED1Q15648 1581 aaPredicted RBP29.22■■■□□ 2.27
PPP4C-207ENST00000563732 ANKRD36BQ8N2N9 1353 aa29.2■■■□□ 2.26
PPP4C-207ENST00000563732 CCDC7Q96M83 1385 aa29.2■■■□□ 2.26
PPP4C-207ENST00000563732 TMC1Q8TDI8 760 aa29.19■■■□□ 2.26
PPP4C-207ENST00000563732 CDCA8Q53HL2 280 aa29.18■■■□□ 2.26
PPP4C-207ENST00000563732 CARD14Q9BXL6 1004 aa29.17■■■□□ 2.26
PPP4C-207ENST00000563732 USP54Q70EL1 1684 aa29.17■■■□□ 2.26
PPP4C-207ENST00000563732 KTN1Q86UP2 1357 aaKnown RBP29.16■■■□□ 2.26
PPP4C-207ENST00000563732 TTC21BQ7Z4L5 1316 aa29.16■■■□□ 2.26
PPP4C-207ENST00000563732 BRD4O60885 1362 aaPredicted RBP29.15■■■□□ 2.26
PPP4C-207ENST00000563732 EDC4Q6P2E9 1401 aaKnown RBP29.14■■■□□ 2.26
PPP4C-207ENST00000563732 PHRF1Q9P1Y6 1649 aaKnown RBP29.14■■■□□ 2.26
PPP4C-207ENST00000563732 ZNF692Q9BU19 519 aaPredicted RBP29.13■■■□□ 2.25
PPP4C-207ENST00000563732 ARHGEF10O15013 1369 aa29.11■■■□□ 2.25
PPP4C-207ENST00000563732 ZRANB1Q9UGI0 708 aa29.09■■■□□ 2.25
PPP4C-207ENST00000563732 USP19O94966 1318 aa29.09■■■□□ 2.25
PPP4C-207ENST00000563732 SLIT3O75094 1523 aa29.09■■■□□ 2.25
PPP4C-207ENST00000563732 CABLES1Q8TDN4 633 aa29.08■■■□□ 2.25
PPP4C-207ENST00000563732 TERF2IPQ9NYB0 399 aa29.08■■■□□ 2.25
PPP4C-207ENST00000563732 SPATA31A6Q5VVP1 1343 aa29.08■■■□□ 2.25
PPP4C-207ENST00000563732 POLR3GLQ9BT43 218 aa29.07■■■□□ 2.24
PPP4C-207ENST00000563732 PAK3O75914 559 aaPredicted RBP29.06■■■□□ 2.24
PPP4C-207ENST00000563732 NUTM2GQ5VZR2 741 aa29.06■■■□□ 2.24
PPP4C-207ENST00000563732 HDGFL2Q7Z4V5 671 aaPredicted RBP29.06■■■□□ 2.24
PPP4C-207ENST00000563732 OVOS2A0A0J9YW53 1432 aa29.05■■■□□ 2.24
PPP4C-207ENST00000563732 OVOS2Q6IE36 1432 aa29.05■■■□□ 2.24
PPP4C-207ENST00000563732 NSD3Q9BZ95 1437 aa29.05■■■□□ 2.24
PPP4C-207ENST00000563732 USP31Q70CQ4 1352 aa29.05■■■□□ 2.24
PPP4C-207ENST00000563732 TTC21AQ8NDW8 1320 aa29.05■■■□□ 2.24
PPP4C-207ENST00000563732 NME9Q86XW9 330 aa29.05■■■□□ 2.24
PPP4C-207ENST00000563732 KIF20BQ96Q89 1820 aa29.04■■■□□ 2.24
PPP4C-207ENST00000563732 PANK3Q9H999 370 aa29.03■■■□□ 2.24
PPP4C-207ENST00000563732 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.02■■■□□ 2.24
PPP4C-207ENST00000563732 NFAT5O94916 1531 aa29.01■■■□□ 2.23
PPP4C-207ENST00000563732 ABTB2Q8N961 1025 aa29.01■■■□□ 2.23
PPP4C-207ENST00000563732 LMOD2Q6P5Q4 547 aa29■■■□□ 2.23
PPP4C-207ENST00000563732 PER1O15534 1290 aaPredicted RBP28.99■■■□□ 2.23
PPP4C-207ENST00000563732 NUTM2BA6NNL0 878 aaPredicted RBP28.98■■■□□ 2.23
PPP4C-207ENST00000563732 NUTM2EB1AL46 878 aaPredicted RBP28.98■■■□□ 2.23
PPP4C-207ENST00000563732 FYB1O15117 783 aa28.98■■■□□ 2.23
PPP4C-207ENST00000563732 NUTM2AQ8IVF1 878 aaPredicted RBP28.98■■■□□ 2.23
PPP4C-207ENST00000563732 PLEKHG5O94827 1062 aa28.94■■■□□ 2.22
PPP4C-207ENST00000563732 NLRP6P59044 892 aa28.94■■■□□ 2.22
PPP4C-207ENST00000563732 ANKRD26Q9UPS8 1709 aa28.94■■■□□ 2.22
PPP4C-207ENST00000563732 COL18A1P39060 1754 aa28.93■■■□□ 2.22
PPP4C-207ENST00000563732 LMO7Q8WWI1 1683 aa28.93■■■□□ 2.22
PPP4C-207ENST00000563732 NLRP13Q86W25 1043 aa28.92■■■□□ 2.22
PPP4C-207ENST00000563732 RGS17Q9UGC6 210 aaPredicted RBP28.92■■■□□ 2.22
PPP4C-207ENST00000563732 PLCH1Q4KWH8 1693 aa28.91■■■□□ 2.22
PPP4C-207ENST00000563732 ADAMTS2O95450 1211 aa28.9■■■□□ 2.22
PPP4C-207ENST00000563732 GCP02774 474 aa28.9■■■□□ 2.22
PPP4C-207ENST00000563732 AMER1Q5JTC6 1135 aaPredicted RBP28.9■■■□□ 2.22
PPP4C-207ENST00000563732 GGNBP2Q9H3C7 697 aa28.9■■■□□ 2.22
PPP4C-207ENST00000563732 SLIT2O94813 1529 aa28.89■■■□□ 2.22
PPP4C-207ENST00000563732 NRAPQ86VF7 1730 aa28.89■■■□□ 2.21
PPP4C-207ENST00000563732 CPDO75976 1380 aa28.88■■■□□ 2.21
PPP4C-207ENST00000563732 KIAA0232Q92628 1395 aa28.88■■■□□ 2.21
PPP4C-207ENST00000563732 COL14A1Q05707 1796 aaKnown RBP28.86■■■□□ 2.21
PPP4C-207ENST00000563732 FAM83GA6ND36 823 aa28.86■■■□□ 2.21
PPP4C-207ENST00000563732 FBLN1P23142 703 aa28.86■■■□□ 2.21
PPP4C-207ENST00000563732 BCL9LQ86UU0 1499 aa28.85■■■□□ 2.21
PPP4C-207ENST00000563732 LTN1O94822 1766 aa28.84■■■□□ 2.21
PPP4C-207ENST00000563732 CAMTA1Q9Y6Y1 1673 aa28.83■■■□□ 2.21
PPP4C-207ENST00000563732 NWD2Q9ULI1 1742 aa28.83■■■□□ 2.21
PPP4C-207ENST00000563732 ZC3H6P61129 1189 aaKnown RBP28.82■■■□□ 2.2
PPP4C-207ENST00000563732 FNBP4Q8N3X1 1017 aaPredicted RBP28.82■■■□□ 2.2
PPP4C-207ENST00000563732 CGNL1Q0VF96 1302 aa28.82■■■□□ 2.2
PPP4C-207ENST00000563732 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.82■■■□□ 2.2
PPP4C-207ENST00000563732 PEAK1Q9H792 1746 aa28.82■■■□□ 2.2
PPP4C-207ENST00000563732 ARHGEF25Q86VW2 580 aa28.81■■■□□ 2.2
PPP4C-207ENST00000563732 C8orf37Q96NL8 207 aa28.81■■■□□ 2.2
PPP4C-207ENST00000563732 RGPD5Q99666 1765 aa28.8■■■□□ 2.2
PPP4C-207ENST00000563732 AFF2P51816 1311 aa28.79■■■□□ 2.2
PPP4C-207ENST00000563732 CHRNA2Q15822 529 aa28.79■■■□□ 2.2
PPP4C-207ENST00000563732 ZNF316A6NFI3 1004 aaPredicted RBP28.78■■■□□ 2.2
PPP4C-207ENST00000563732 COG3Q96JB2 828 aa28.78■■■□□ 2.2
PPP4C-207ENST00000563732 NSD2O96028 1365 aa28.77■■■□□ 2.2
PPP4C-207ENST00000563732 NPC1L1Q9UHC9 1359 aa28.77■■■□□ 2.2
PPP4C-207ENST00000563732 SOX12O15370 315 aa28.76■■■□□ 2.19
PPP4C-207ENST00000563732 ABCC6O95255 1503 aa28.75■■■□□ 2.19
PPP4C-207ENST00000563732 MEX3CQ5U5Q3 659 aaKnown RBP28.75■■■□□ 2.19
PPP4C-207ENST00000563732 AXIN2Q9Y2T1 843 aa28.75■■■□□ 2.19
PPP4C-207ENST00000563732 AATKQ6ZMQ8 1374 aa28.75■■■□□ 2.19
PPP4C-207ENST00000563732 DDX10Q13206 875 aaKnown RBP28.74■■■□□ 2.19
PPP4C-207ENST00000563732 KCNH5Q8NCM2 988 aa28.74■■■□□ 2.19
PPP4C-207ENST00000563732 KNSTRNQ9Y448 316 aa28.74■■■□□ 2.19
PPP4C-207ENST00000563732 HAP1P54257 671 aaPredicted RBP28.73■■■□□ 2.19
PPP4C-207ENST00000563732 NGLY1Q96IV0 654 aa28.73■■■□□ 2.19
PPP4C-207ENST00000563732 PRDM11Q9NQV5 511 aa28.73■■■□□ 2.19
PPP4C-207ENST00000563732 MAP3K19Q56UN5 1328 aa28.72■■■□□ 2.19
PPP4C-207ENST00000563732 ATRNO75882 1429 aa28.72■■■□□ 2.19
PPP4C-207ENST00000563732 POTEAQ6S8J7 498 aa28.72■■■□□ 2.19
PPP4C-207ENST00000563732 MAP2P11137 1827 aaKnown RBP28.71■■■□□ 2.19
PPP4C-207ENST00000563732 COL5A2P05997 1499 aaPredicted RBP28.71■■■□□ 2.19
PPP4C-207ENST00000563732 RRS1Q15050 365 aaKnown RBP28.69■■■□□ 2.18
PPP4C-207ENST00000563732 GLI3P10071 1580 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms