RNA–Protein interactions for RNA: ENST00000562431.1

LPCAT4-203, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 341 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-203ENST00000562431 USP21Q9UK80 565 aa16.4■□□□□ 0.22
LPCAT4-203ENST00000562431 NPHP3Q7Z494 1330 aa16.4■□□□□ 0.22
LPCAT4-203ENST00000562431 RGPD8O14715 1765 aaPredicted RBP16.39■□□□□ 0.21
LPCAT4-203ENST00000562431 PUS7Q96PZ0 661 aaKnown RBP16.39■□□□□ 0.21
LPCAT4-203ENST00000562431 CABP1Q9NZU7 370 aa16.39■□□□□ 0.21
LPCAT4-203ENST00000562431 TRPC5Q9UL62 973 aaPredicted RBP16.39■□□□□ 0.21
LPCAT4-203ENST00000562431 KIF1AQ12756 1690 aa16.39■□□□□ 0.21
LPCAT4-203ENST00000562431 ITSN1Q15811 1721 aa16.39■□□□□ 0.21
LPCAT4-203ENST00000562431 XPCQ01831 940 aaPredicted RBP16.38■□□□□ 0.21
LPCAT4-203ENST00000562431 PLEKHG3A1L390 1219 aa16.37■□□□□ 0.21
LPCAT4-203ENST00000562431 PSME1Q06323 249 aa16.37■□□□□ 0.21
LPCAT4-203ENST00000562431 TOPAZ1Q8N9V7 1692 aa16.37■□□□□ 0.21
LPCAT4-203ENST00000562431 GLI3P10071 1580 aa16.36■□□□□ 0.21
LPCAT4-203ENST00000562431 ACEP12821 1306 aa16.36■□□□□ 0.21
LPCAT4-203ENST00000562431 KRT28Q7Z3Y7 464 aa16.35■□□□□ 0.21
LPCAT4-203ENST00000562431 SLC12A5Q9H2X9 1139 aa16.34■□□□□ 0.21
LPCAT4-203ENST00000562431 POLR3AO14802 1390 aaPredicted RBP16.34■□□□□ 0.21
LPCAT4-203ENST00000562431 NINLQ9Y2I6 1382 aa16.34■□□□□ 0.21
LPCAT4-203ENST00000562431 HDGFL2Q7Z4V5 671 aaPredicted RBP16.33■□□□□ 0.2
LPCAT4-203ENST00000562431 SLIT2O94813 1529 aa16.33■□□□□ 0.2
LPCAT4-203ENST00000562431 BRWD3Q6RI45 1802 aa16.33■□□□□ 0.2
LPCAT4-203ENST00000562431 C11orf95C9JLR9 678 aaPredicted RBP16.32■□□□□ 0.2
LPCAT4-203ENST00000562431 TERF2IPQ9NYB0 399 aa16.32■□□□□ 0.2
LPCAT4-203ENST00000562431 KIF7Q2M1P5 1343 aa16.31■□□□□ 0.2
LPCAT4-203ENST00000562431 PAK3O75914 559 aaPredicted RBP16.31■□□□□ 0.2
LPCAT4-203ENST00000562431 LMOD2Q6P5Q4 547 aa16.31■□□□□ 0.2
LPCAT4-203ENST00000562431 ZNF692Q9BU19 519 aaPredicted RBP16.3■□□□□ 0.2
LPCAT4-203ENST00000562431 ABCA3Q99758 1704 aa16.3■□□□□ 0.2
LPCAT4-203ENST00000562431 KTN1Q86UP2 1357 aaKnown RBP16.29■□□□□ 0.2
LPCAT4-203ENST00000562431 USP6P35125 1406 aa16.28■□□□□ 0.2
LPCAT4-203ENST00000562431 CPSF1Q10570 1443 aaKnown RBP16.28■□□□□ 0.2
LPCAT4-203ENST00000562431 A0A1W2PP64 1363 aa16.28■□□□□ 0.2
LPCAT4-203ENST00000562431 SBNO1A3KN83 1393 aa16.28■□□□□ 0.2
LPCAT4-203ENST00000562431 GJD4Q96KN9 370 aaPredicted RBP16.28■□□□□ 0.2
LPCAT4-203ENST00000562431 TNS3Q68CZ2 1445 aa16.28■□□□□ 0.2
LPCAT4-203ENST00000562431 PLCH1Q4KWH8 1693 aa16.27■□□□□ 0.2
LPCAT4-203ENST00000562431 ANKRD36BQ8N2N9 1353 aa16.27■□□□□ 0.2
LPCAT4-203ENST00000562431 CCDC7Q96M83 1385 aa16.27■□□□□ 0.2
LPCAT4-203ENST00000562431 SPATA31A3Q5VYP0 1347 aa16.27■□□□□ 0.2
LPCAT4-203ENST00000562431 ZRANB1Q9UGI0 708 aa16.27■□□□□ 0.2
LPCAT4-203ENST00000562431 CD163L1Q9NR16 1453 aa16.27■□□□□ 0.19
LPCAT4-203ENST00000562431 WASHC2AQ641Q2 1341 aa16.26■□□□□ 0.19
LPCAT4-203ENST00000562431 CCDC125Q86Z20 511 aa16.26■□□□□ 0.19
LPCAT4-203ENST00000562431 BLMP54132 1417 aaPredicted RBP16.26■□□□□ 0.19
LPCAT4-203ENST00000562431 ARHGEF10O15013 1369 aa16.26■□□□□ 0.19
LPCAT4-203ENST00000562431 BRD4O60885 1362 aaPredicted RBP16.26■□□□□ 0.19
LPCAT4-203ENST00000562431 PLEKHG5O94827 1062 aa16.25■□□□□ 0.19
LPCAT4-203ENST00000562431 LRP5O75197 1615 aa16.25■□□□□ 0.19
LPCAT4-203ENST00000562431 NWD2Q9ULI1 1742 aa16.25■□□□□ 0.19
LPCAT4-203ENST00000562431 MYOM1P52179 1685 aa16.24■□□□□ 0.19
LPCAT4-203ENST00000562431 TTC21BQ7Z4L5 1316 aa16.24■□□□□ 0.19
LPCAT4-203ENST00000562431 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.24■□□□□ 0.19
LPCAT4-203ENST00000562431 AKAP12Q02952 1782 aa16.23■□□□□ 0.19
LPCAT4-203ENST00000562431 TRPM3Q9HCF6 1732 aaPredicted RBP16.23■□□□□ 0.19
LPCAT4-203ENST00000562431 EDC4Q6P2E9 1401 aaKnown RBP16.23■□□□□ 0.19
LPCAT4-203ENST00000562431 NUTM2GQ5VZR2 741 aa16.23■□□□□ 0.19
LPCAT4-203ENST00000562431 UNC5CLQ8IV45 518 aa16.23■□□□□ 0.19
LPCAT4-203ENST00000562431 ABTB2Q8N961 1025 aa16.23■□□□□ 0.19
LPCAT4-203ENST00000562431 TTC21AQ8NDW8 1320 aa16.22■□□□□ 0.19
LPCAT4-203ENST00000562431 PANK3Q9H999 370 aa16.22■□□□□ 0.19
LPCAT4-203ENST00000562431 SSH2Q76I76 1423 aa16.21■□□□□ 0.19
LPCAT4-203ENST00000562431 HAP1P54257 671 aaPredicted RBP16.21■□□□□ 0.19
LPCAT4-203ENST00000562431 MON2Q7Z3U7 1717 aa16.21■□□□□ 0.19
LPCAT4-203ENST00000562431 NRAPQ86VF7 1730 aa16.21■□□□□ 0.19
LPCAT4-203ENST00000562431 NSD3Q9BZ95 1437 aa16.19■□□□□ 0.18
LPCAT4-203ENST00000562431 ALS2Q96Q42 1657 aa16.19■□□□□ 0.18
LPCAT4-203ENST00000562431 NRKQ7Z2Y5 1582 aa16.19■□□□□ 0.18
LPCAT4-203ENST00000562431 NLRP6P59044 892 aa16.19■□□□□ 0.18
LPCAT4-203ENST00000562431 NLRP13Q86W25 1043 aa16.19■□□□□ 0.18
LPCAT4-203ENST00000562431 NME9Q86XW9 330 aa16.19■□□□□ 0.18
LPCAT4-203ENST00000562431 CARD14Q9BXL6 1004 aa16.19■□□□□ 0.18
LPCAT4-203ENST00000562431 DEFB132Q7Z7B7 95 aa16.18■□□□□ 0.18
LPCAT4-203ENST00000562431 CABLES1Q8TDN4 633 aa16.18■□□□□ 0.18
LPCAT4-203ENST00000562431 ZNF316A6NFI3 1004 aaPredicted RBP16.17■□□□□ 0.18
LPCAT4-203ENST00000562431 ONECUT3O60422 494 aaPredicted RBP16.16■□□□□ 0.18
LPCAT4-203ENST00000562431 KNSTRNQ9Y448 316 aa16.16■□□□□ 0.18
LPCAT4-203ENST00000562431 CGNL1Q0VF96 1302 aa16.16■□□□□ 0.18
LPCAT4-203ENST00000562431 VPS72Q15906 364 aa16.15■□□□□ 0.18
LPCAT4-203ENST00000562431 CRYBG1Q9Y4K1 1723 aa16.15■□□□□ 0.18
LPCAT4-203ENST00000562431 PIK3C2AO00443 1686 aa16.14■□□□□ 0.18
LPCAT4-203ENST00000562431 SEPT12Q8IYM1 358 aa16.14■□□□□ 0.17
LPCAT4-203ENST00000562431 COG3Q96JB2 828 aa16.14■□□□□ 0.17
LPCAT4-203ENST00000562431 GGNBP2Q9H3C7 697 aa16.14■□□□□ 0.17
LPCAT4-203ENST00000562431 USP19O94966 1318 aa16.14■□□□□ 0.17
LPCAT4-203ENST00000562431 FYB1O15117 783 aa16.13■□□□□ 0.17
LPCAT4-203ENST00000562431 SOX12O15370 315 aa16.13■□□□□ 0.17
LPCAT4-203ENST00000562431 USP31Q70CQ4 1352 aa16.13■□□□□ 0.17
LPCAT4-203ENST00000562431 GCP02774 474 aa16.11■□□□□ 0.17
LPCAT4-203ENST00000562431 DDX10Q13206 875 aaKnown RBP16.11■□□□□ 0.17
LPCAT4-203ENST00000562431 THSD7AQ9UPZ6 1657 aa16.11■□□□□ 0.17
LPCAT4-203ENST00000562431 TNS1Q9HBL0 1735 aaKnown RBP16.11■□□□□ 0.17
LPCAT4-203ENST00000562431 OVOS2A0A0J9YW53 1432 aa16.11■□□□□ 0.17
LPCAT4-203ENST00000562431 OVOS2Q6IE36 1432 aa16.11■□□□□ 0.17
LPCAT4-203ENST00000562431 ZBTB7CA1YPR0 619 aa16.1■□□□□ 0.17
LPCAT4-203ENST00000562431 ZC3H6P61129 1189 aaKnown RBP16.1■□□□□ 0.17
LPCAT4-203ENST00000562431 KCNH5Q8NCM2 988 aa16.1■□□□□ 0.17
LPCAT4-203ENST00000562431 RGPD1P0DJD0 1748 aa16.1■□□□□ 0.17
LPCAT4-203ENST00000562431 COL14A1Q05707 1796 aaKnown RBP16.1■□□□□ 0.17
LPCAT4-203ENST00000562431 SLIT3O75094 1523 aa16.09■□□□□ 0.17
LPCAT4-203ENST00000562431 PHRF1Q9P1Y6 1649 aaKnown RBP16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms