RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 CCDC47Q96A33 483 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-202ENST00000561623 RDXP35241 583 aaKnown RBP12.22□□□□□ -0.45
GTF3C1-202ENST00000561623 MTHFSP49914 203 aa12.22□□□□□ -0.45
GTF3C1-202ENST00000561623 ZSCAN30Q86W11 494 aa12.21□□□□□ -0.45
GTF3C1-202ENST00000561623 LRRFIP1Q32MZ4 808 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-202ENST00000561623 CNTROBQ8N137 903 aa12.21□□□□□ -0.45
GTF3C1-202ENST00000561623 CCDC192P0DO97 292 aa12.21□□□□□ -0.46
GTF3C1-202ENST00000561623 RRP12Q5JTH9 1297 aaKnown RBP12.21□□□□□ -0.46
GTF3C1-202ENST00000561623 NINLQ9Y2I6 1382 aa12.2□□□□□ -0.46
GTF3C1-202ENST00000561623 AXDND1Q5T1B0 1012 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-202ENST00000561623 FAM177A1Q8N128 213 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-202ENST00000561623 ERCC4Q92889 916 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-202ENST00000561623 UBTFL1P0CB47 393 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-202ENST00000561623 SYCE3A1L190 88 aa12.2□□□□□ -0.46
GTF3C1-202ENST00000561623 MYCNP04198 464 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-202ENST00000561623 PSMA5P28066 241 aa12.2□□□□□ -0.46
GTF3C1-202ENST00000561623 CDR1P51861 262 aa12.2□□□□□ -0.46
GTF3C1-202ENST00000561623 BRPF1P55201 1214 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-202ENST00000561623 PDCL2Q8N4E4 241 aa12.2□□□□□ -0.46
GTF3C1-202ENST00000561623 TSPYL1Q9H0U9 437 aa12.2□□□□□ -0.46
GTF3C1-202ENST00000561623 PROSER2Q86WR7 435 aaPredicted RBP12.19□□□□□ -0.46
GTF3C1-202ENST00000561623 MCM2P49736 904 aa12.19□□□□□ -0.46
GTF3C1-202ENST00000561623 NEUROD6Q96NK8 337 aa12.19□□□□□ -0.46
GTF3C1-202ENST00000561623 FSD1Q9BTV5 496 aa12.19□□□□□ -0.46
GTF3C1-202ENST00000561623 TNMDQ9H2S6 317 aa12.19□□□□□ -0.46
GTF3C1-202ENST00000561623 MIA2Q96PC5 1412 aa12.19□□□□□ -0.46
GTF3C1-202ENST00000561623 SAFBQ15424 915 aaKnown RBP eCLIP12.19□□□□□ -0.46
GTF3C1-202ENST00000561623 VGFO15240 615 aaPredicted RBP12.19□□□□□ -0.46
GTF3C1-202ENST00000561623 XPCQ01831 940 aaPredicted RBP12.19□□□□□ -0.46
GTF3C1-202ENST00000561623 HSP90AB4PQ58FF6 505 aa12.19□□□□□ -0.46
GTF3C1-202ENST00000561623 GCC1Q96CN9 775 aa12.19□□□□□ -0.46
GTF3C1-202ENST00000561623 STK3Q13188 491 aa12.19□□□□□ -0.46
GTF3C1-202ENST00000561623 NBPF8Q3BBV2 869 aa12.19□□□□□ -0.46
GTF3C1-202ENST00000561623 VPS37DQ86XT2 251 aa12.19□□□□□ -0.46
GTF3C1-202ENST00000561623 MYOM3Q5VTT5 1437 aa12.19□□□□□ -0.46
GTF3C1-202ENST00000561623 CABP2Q9NPB3 220 aa12.19□□□□□ -0.46
GTF3C1-202ENST00000561623 WDR97A6NE52 1622 aa12.19□□□□□ -0.46
GTF3C1-202ENST00000561623 MAP4K4O95819 1239 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-202ENST00000561623 DHX37Q8IY37 1157 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-202ENST00000561623 LRRC9Q6ZRR7 1453 aa12.18□□□□□ -0.46
GTF3C1-202ENST00000561623 SURF6O75683 361 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-202ENST00000561623 WASHC4Q2M389 1173 aa12.18□□□□□ -0.46
GTF3C1-202ENST00000561623 HSP90AB3PQ58FF7 597 aa12.18□□□□□ -0.46
GTF3C1-202ENST00000561623 RALYLQ86SE5 291 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-202ENST00000561623 AIMP1Q12904 312 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-202ENST00000561623 ATP2B1P20020 1258 aa12.17□□□□□ -0.46
GTF3C1-202ENST00000561623 IBSPP21815 317 aaPredicted RBP12.17□□□□□ -0.46
GTF3C1-202ENST00000561623 ERICH2A1L162 156 aa12.17□□□□□ -0.46
GTF3C1-202ENST00000561623 DHX16O60231 1041 aaKnown RBP12.17□□□□□ -0.46
GTF3C1-202ENST00000561623 TTC5Q8N0Z6 440 aa12.17□□□□□ -0.46
GTF3C1-202ENST00000561623 CCP110O43303 1012 aa12.17□□□□□ -0.46
GTF3C1-202ENST00000561623 PRDM2Q13029 1718 aa12.17□□□□□ -0.46
GTF3C1-202ENST00000561623 WDR33Q9C0J8 1336 aaKnown RBP12.17□□□□□ -0.46
GTF3C1-202ENST00000561623 SERPINC1P01008 464 aa12.16□□□□□ -0.46
GTF3C1-202ENST00000561623 C20orf194Q5TEA3 1177 aa12.16□□□□□ -0.46
GTF3C1-202ENST00000561623 CHD1LQ86WJ1 897 aa12.16□□□□□ -0.46
GTF3C1-202ENST00000561623 DDX58O95786 925 aaKnown RBP12.16□□□□□ -0.46
GTF3C1-202ENST00000561623 PLCD4Q9BRC7 762 aa12.16□□□□□ -0.46
GTF3C1-202ENST00000561623 MVPQ14764 893 aaKnown RBP12.16□□□□□ -0.46
GTF3C1-202ENST00000561623 WDHD1O75717 1129 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-202ENST00000561623 NBPF1Q3BBV0 1214 aa12.16□□□□□ -0.46
GTF3C1-202ENST00000561623 CCDC191Q8NCU4 936 aa12.15□□□□□ -0.46
GTF3C1-202ENST00000561623 ZHX1Q9UKY1 873 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-202ENST00000561623 SPDYE4A6NLX3 237 aa12.15□□□□□ -0.46
GTF3C1-202ENST00000561623 UBE2Q2Q8WVN8 375 aa12.15□□□□□ -0.46
GTF3C1-202ENST00000561623 DNAJC2Q99543 621 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-202ENST00000561623 CIZ1Q9ULV3 898 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-202ENST00000561623 TWISTNBQ3B726 338 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-202ENST00000561623 PDCP20941 246 aa12.15□□□□□ -0.46
GTF3C1-202ENST00000561623 STK38Q15208 465 aa12.15□□□□□ -0.46
GTF3C1-202ENST00000561623 ZMYND15Q9H091 742 aa12.15□□□□□ -0.47
GTF3C1-202ENST00000561623 CT47B1P0C2W7 299 aaPredicted RBP12.14□□□□□ -0.47
GTF3C1-202ENST00000561623 TMEM132EQ6IEE7 984 aa12.14□□□□□ -0.47
GTF3C1-202ENST00000561623 NUTM2GQ5VZR2 741 aa12.14□□□□□ -0.47
GTF3C1-202ENST00000561623 FILIP1Q7Z7B0 1213 aa12.14□□□□□ -0.47
GTF3C1-202ENST00000561623 FAM177BA6PVY3 158 aa12.14□□□□□ -0.47
GTF3C1-202ENST00000561623 STK11IPQ8N1F8 1099 aa12.14□□□□□ -0.47
GTF3C1-202ENST00000561623 PRKAR2BP31323 418 aa12.14□□□□□ -0.47
GTF3C1-202ENST00000561623 DCTN1Q14203 1278 aa12.14□□□□□ -0.47
GTF3C1-202ENST00000561623 PPM1FP49593 454 aaPredicted RBP12.13□□□□□ -0.47
GTF3C1-202ENST00000561623 FAM193AP78312 1265 aa12.13□□□□□ -0.47
GTF3C1-202ENST00000561623 TTLL12Q14166 644 aaPredicted RBP12.13□□□□□ -0.47
GTF3C1-202ENST00000561623 CLASRPQ8N2M8 674 aaKnown RBP12.13□□□□□ -0.47
GTF3C1-202ENST00000561623 ZNF396Q96N95 335 aaPredicted RBP12.13□□□□□ -0.47
GTF3C1-202ENST00000561623 RIC3Q7Z5B4 369 aa12.13□□□□□ -0.47
GTF3C1-202ENST00000561623 RRBP1Q9P2E9 1410 aaKnown RBP12.13□□□□□ -0.47
GTF3C1-202ENST00000561623 SMARCE1Q969G3 411 aa12.13□□□□□ -0.47
GTF3C1-202ENST00000561623 TRERF1Q96PN7 1200 aa12.13□□□□□ -0.47
GTF3C1-202ENST00000561623 UBAP1LF5GYI3 381 aa12.13□□□□□ -0.47
GTF3C1-202ENST00000561623 FYB1O15117 783 aa12.13□□□□□ -0.47
GTF3C1-202ENST00000561623 ME1P48163 572 aa12.13□□□□□ -0.47
GTF3C1-202ENST00000561623 CAMK4Q16566 473 aa12.13□□□□□ -0.47
GTF3C1-202ENST00000561623 CYP46A1Q9Y6A2 500 aa12.13□□□□□ -0.47
GTF3C1-202ENST00000561623 CUX1P39880 1505 aa12.12□□□□□ -0.47
GTF3C1-202ENST00000561623 KRT85P78386 507 aa12.12□□□□□ -0.47
GTF3C1-202ENST00000561623 ZNF428Q96B54 188 aa12.12□□□□□ -0.47
GTF3C1-202ENST00000561623 C11orf95C9JLR9 678 aaPredicted RBP12.12□□□□□ -0.47
GTF3C1-202ENST00000561623 OFD1O75665 1012 aa12.12□□□□□ -0.47
GTF3C1-202ENST00000561623 ATF7IPQ6VMQ6 1270 aa12.12□□□□□ -0.47
GTF3C1-202ENST00000561623 PDCL3Q9H2J4 239 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms