RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 TRIM32Q13049 653 aa6.53□□□□□ -1.36
CTDSPL2-211ENST00000561189 LAPTM4AQ15012 233 aa6.53□□□□□ -1.36
CTDSPL2-211ENST00000561189 CLUAP1Q96AJ1 413 aa6.53□□□□□ -1.36
CTDSPL2-211ENST00000561189 ARID3AQ99856 593 aa6.53□□□□□ -1.36
CTDSPL2-211ENST00000561189 ZC3H4Q9UPT8 1303 aaKnown RBP6.52□□□□□ -1.37
CTDSPL2-211ENST00000561189 ZBTB24O43167 697 aaPredicted RBP6.52□□□□□ -1.37
CTDSPL2-211ENST00000561189 PNMA1Q8ND90 353 aa6.52□□□□□ -1.37
CTDSPL2-211ENST00000561189 GPKOWQ92917 476 aaPredicted RBP eCLIP6.52□□□□□ -1.37
CTDSPL2-211ENST00000561189 TRAK2O60296 914 aa6.51□□□□□ -1.37
CTDSPL2-211ENST00000561189 ARMC2Q8NEN0 867 aa6.51□□□□□ -1.37
CTDSPL2-211ENST00000561189 CCDC97Q96F63 343 aaPredicted RBP6.51□□□□□ -1.37
CTDSPL2-211ENST00000561189 UNC93B1Q9H1C4 597 aa6.51□□□□□ -1.37
CTDSPL2-211ENST00000561189 WNT7AO00755 349 aa6.5□□□□□ -1.37
CTDSPL2-211ENST00000561189 PER1O15534 1290 aaPredicted RBP6.5□□□□□ -1.37
CTDSPL2-211ENST00000561189 GDF9O60383 454 aa6.5□□□□□ -1.37
CTDSPL2-211ENST00000561189 ZNF697Q5TEC3 545 aa6.5□□□□□ -1.37
CTDSPL2-211ENST00000561189 PTCRAQ6ISU1 281 aaPredicted RBP6.5□□□□□ -1.37
CTDSPL2-211ENST00000561189 USP17L8P0C7I0 530 aa6.49□□□□□ -1.37
CTDSPL2-211ENST00000561189 CTDSPL2Q05D32 466 aa6.49□□□□□ -1.37
CTDSPL2-211ENST00000561189 TRIM67Q6ZTA4 783 aa6.49□□□□□ -1.37
CTDSPL2-211ENST00000561189 MPNDQ8N594 471 aa6.49□□□□□ -1.37
CTDSPL2-211ENST00000561189 IRX2Q9BZI1 471 aaPredicted RBP6.49□□□□□ -1.37
CTDSPL2-211ENST00000561189 ZNF330Q9Y3S2 320 aaPredicted RBP6.49□□□□□ -1.37
CTDSPL2-211ENST00000561189 NDUFB9Q9Y6M9 179 aa6.49□□□□□ -1.37
CTDSPL2-211ENST00000561189 ARID3CA6NKF2 412 aa6.48□□□□□ -1.37
CTDSPL2-211ENST00000561189 ABL2P42684 1182 aa6.48□□□□□ -1.37
CTDSPL2-211ENST00000561189 CCDC24Q8N4L8 307 aa6.48□□□□□ -1.37
CTDSPL2-211ENST00000561189 SNRKQ9NRH2 765 aa6.48□□□□□ -1.37
CTDSPL2-211ENST00000561189 PKD2L1Q9P0L9 805 aa6.48□□□□□ -1.37
CTDSPL2-211ENST00000561189 NRG2O14511 850 aaPredicted RBP6.47□□□□□ -1.37
CTDSPL2-211ENST00000561189 NBPF14Q5TI25 921 aa6.47□□□□□ -1.37
CTDSPL2-211ENST00000561189 ZNF511Q8NB15 262 aa6.47□□□□□ -1.37
CTDSPL2-211ENST00000561189 MAP10Q9P2G4 905 aa6.47□□□□□ -1.37
CTDSPL2-211ENST00000561189 SERPINA10Q9UK55 444 aa6.47□□□□□ -1.37
CTDSPL2-211ENST00000561189 COG6Q9Y2V7 657 aa6.47□□□□□ -1.37
CTDSPL2-211ENST00000561189 GPSM3Q9Y4H4 160 aa6.47□□□□□ -1.37
CTDSPL2-211ENST00000561189 SKOR1P84550 965 aa6.46□□□□□ -1.38
CTDSPL2-211ENST00000561189 SH3RF1Q7Z6J0 888 aa6.46□□□□□ -1.38
CTDSPL2-211ENST00000561189 GDPD2Q9HCC8 539 aa6.46□□□□□ -1.38
CTDSPL2-211ENST00000561189 ZNF777Q9ULD5 760 aaPredicted RBP6.46□□□□□ -1.38
CTDSPL2-211ENST00000561189 SH3BP2P78314 561 aa6.45□□□□□ -1.38
CTDSPL2-211ENST00000561189 WASHC4Q2M389 1173 aa6.45□□□□□ -1.38
CTDSPL2-211ENST00000561189 SH3BP5LQ7L8J4 393 aa6.45□□□□□ -1.38
CTDSPL2-211ENST00000561189 MTMR14Q8NCE2 650 aa6.45□□□□□ -1.38
CTDSPL2-211ENST00000561189 LRRN4Q8WUT4 740 aa6.45□□□□□ -1.38
CTDSPL2-211ENST00000561189 POM121Q96HA1 1249 aa6.45□□□□□ -1.38
CTDSPL2-211ENST00000561189 GJD4Q96KN9 370 aaPredicted RBP6.45□□□□□ -1.38
CTDSPL2-211ENST00000561189 TRIM34Q9BYJ4 488 aa6.45□□□□□ -1.38
CTDSPL2-211ENST00000561189 TOR4AQ9NXH8 423 aa6.45□□□□□ -1.38
CTDSPL2-211ENST00000561189 FKBPLQ9UIM3 349 aa6.45□□□□□ -1.38
CTDSPL2-211ENST00000561189 SIAH2O43255 324 aa6.44□□□□□ -1.38
CTDSPL2-211ENST00000561189 VARSP26640 1264 aaKnown RBP6.44□□□□□ -1.38
CTDSPL2-211ENST00000561189 CTHP32929 405 aa6.44□□□□□ -1.38
CTDSPL2-211ENST00000561189 PDXDC2PQ6P474 469 aa6.44□□□□□ -1.38
CTDSPL2-211ENST00000561189 C1QTNF2Q9BXJ5 285 aa6.44□□□□□ -1.38
CTDSPL2-211ENST00000561189 PDZRN3Q9UPQ7 1066 aa6.44□□□□□ -1.38
CTDSPL2-211ENST00000561189 RC3H1Q5TC82 1133 aaKnown RBP6.43□□□□□ -1.38
CTDSPL2-211ENST00000561189 BPHLQ86WA6 291 aaPredicted RBP6.43□□□□□ -1.38
CTDSPL2-211ENST00000561189 TRMT44Q8IYL2 757 aaKnown RBP6.43□□□□□ -1.38
CTDSPL2-211ENST00000561189 CCDC82Q8N4S0 544 aa6.43□□□□□ -1.38
CTDSPL2-211ENST00000561189 HMX1Q9NP08 348 aaPredicted RBP6.43□□□□□ -1.38
CTDSPL2-211ENST00000561189 BAP1Q92560 729 aa6.42□□□□□ -1.38
CTDSPL2-211ENST00000561189 CALR3Q96L12 384 aaKnown RBP6.42□□□□□ -1.38
CTDSPL2-211ENST00000561189 TBC1D2BQ9UPU7 963 aa6.42□□□□□ -1.38
CTDSPL2-211ENST00000561189 DGAT1O75907 488 aa6.41□□□□□ -1.38
CTDSPL2-211ENST00000561189 NR6A1Q15406 480 aa6.41□□□□□ -1.38
CTDSPL2-211ENST00000561189 SNIP1Q8TAD8 396 aaKnown RBP6.41□□□□□ -1.38
CTDSPL2-211ENST00000561189 MRGPRX2Q96LB1 330 aa6.41□□□□□ -1.38
CTDSPL2-211ENST00000561189 CDK15Q96Q40 435 aa6.41□□□□□ -1.38
CTDSPL2-211ENST00000561189 MAP4K5Q9Y4K4 846 aa6.41□□□□□ -1.38
CTDSPL2-211ENST00000561189 GFRA3O60609 400 aa6.4□□□□□ -1.38
CTDSPL2-211ENST00000561189 GPR37L1O60883 481 aa6.4□□□□□ -1.38
CTDSPL2-211ENST00000561189 AVPP01185 164 aa6.4□□□□□ -1.38
CTDSPL2-211ENST00000561189 CRIPAKQ8N1N5 446 aa6.4□□□□□ -1.38
CTDSPL2-211ENST00000561189 C4orf48Q5BLP8 95 aa6.39□□□□□ -1.39
CTDSPL2-211ENST00000561189 FNBP4Q8N3X1 1017 aaPredicted RBP6.39□□□□□ -1.39
CTDSPL2-211ENST00000561189 EHBP1Q8NDI1 1231 aa6.39□□□□□ -1.39
CTDSPL2-211ENST00000561189 FAM174AQ8TBP5 190 aa6.39□□□□□ -1.39
CTDSPL2-211ENST00000561189 ZNF592Q92610 1267 aa6.39□□□□□ -1.39
CTDSPL2-211ENST00000561189 CDV3Q9UKY7 258 aaKnown RBP6.39□□□□□ -1.39
CTDSPL2-211ENST00000561189 SOX11P35716 441 aa6.38□□□□□ -1.39
CTDSPL2-211ENST00000561189 SMCPP49901 116 aaPredicted RBP6.38□□□□□ -1.39
CTDSPL2-211ENST00000561189 PTK2Q05397 1052 aa6.38□□□□□ -1.39
CTDSPL2-211ENST00000561189 CYP4X1Q8N118 509 aa6.38□□□□□ -1.39
CTDSPL2-211ENST00000561189 ACIN1Q9UKV3 1341 aaKnown RBP6.37□□□□□ -1.39
CTDSPL2-211ENST00000561189 TNFRSF10AO00220 468 aa6.37□□□□□ -1.39
CTDSPL2-211ENST00000561189 MCCD1P59942 119 aaPredicted RBP6.37□□□□□ -1.39
CTDSPL2-211ENST00000561189 EIF4G2P78344 907 aaKnown RBP eCLIP6.37□□□□□ -1.39
CTDSPL2-211ENST00000561189 SEMA3FQ13275 785 aa6.37□□□□□ -1.39
CTDSPL2-211ENST00000561189 LINC01559Q495D7 138 aa6.37□□□□□ -1.39
CTDSPL2-211ENST00000561189 EPS8L1Q8TE68 723 aa6.37□□□□□ -1.39
CTDSPL2-211ENST00000561189 FOXJ1Q92949 421 aa6.37□□□□□ -1.39
CTDSPL2-211ENST00000561189 GLMNQ92990 594 aa6.37□□□□□ -1.39
CTDSPL2-211ENST00000561189 OCSTAMPQ9BR26 566 aa6.37□□□□□ -1.39
CTDSPL2-211ENST00000561189 C1orf115Q9H7X2 142 aa6.37□□□□□ -1.39
CTDSPL2-211ENST00000561189 PDIA4P13667 645 aaKnown RBP6.36□□□□□ -1.39
CTDSPL2-211ENST00000561189 SMPD1P17405 629 aa6.36□□□□□ -1.39
CTDSPL2-211ENST00000561189 PDE4CQ08493 712 aa6.36□□□□□ -1.39
CTDSPL2-211ENST00000561189 FOXC1Q12948 553 aa6.36□□□□□ -1.39
CTDSPL2-211ENST00000561189 CTC1Q2NKJ3 1217 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms